RNA–Protein interactions for RNA: ENST00000340898.6

RNFT1P3-201, Transcript of ring finger protein, transmembrane 1 pseudogene 3, humanhuman

BASIC

Gene RNFT1P3, Length 1,052 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1P3-201ENST00000340898 PRDM11Q9NQV5 511 aa8.53□□□□□ -1.04
RNFT1P3-201ENST00000340898 COL14A1Q05707 1796 aaKnown RBP8.53□□□□□ -1.04
RNFT1P3-201ENST00000340898 CLSPNQ9HAW4 1339 aa8.53□□□□□ -1.04
RNFT1P3-201ENST00000340898 PIK3C2AO00443 1686 aa8.53□□□□□ -1.04
RNFT1P3-201ENST00000340898 PPP1R12BO60237 982 aaPredicted RBP8.52□□□□□ -1.05
RNFT1P3-201ENST00000340898 ZIC2O95409 532 aaPredicted RBP8.52□□□□□ -1.05
RNFT1P3-201ENST00000340898 SMPD1P17405 629 aa8.52□□□□□ -1.05
RNFT1P3-201ENST00000340898 MAPK1P28482 360 aa8.52□□□□□ -1.05
RNFT1P3-201ENST00000340898 EPHA4P54764 986 aa8.52□□□□□ -1.05
RNFT1P3-201ENST00000340898 ZSCAN29Q8IWY8 852 aaPredicted RBP8.52□□□□□ -1.05
RNFT1P3-201ENST00000340898 TMC1Q8TDI8 760 aa8.52□□□□□ -1.05
RNFT1P3-201ENST00000340898 BCL2L13Q9BXK5 485 aa8.52□□□□□ -1.05
RNFT1P3-201ENST00000340898 DCTN4Q9UJW0 460 aa8.52□□□□□ -1.05
RNFT1P3-201ENST00000340898 PDZRN3Q9UPQ7 1066 aa8.52□□□□□ -1.05
RNFT1P3-201ENST00000340898 CAMTA1Q9Y6Y1 1673 aa8.52□□□□□ -1.05
RNFT1P3-201ENST00000340898 NRKQ7Z2Y5 1582 aa8.52□□□□□ -1.05
RNFT1P3-201ENST00000340898 KTN1Q86UP2 1357 aaKnown RBP8.51□□□□□ -1.05
RNFT1P3-201ENST00000340898 A6NJY4 79 aa8.51□□□□□ -1.05
RNFT1P3-201ENST00000340898 FAM13AO94988 1023 aa8.51□□□□□ -1.05
RNFT1P3-201ENST00000340898 ADD1P35611 737 aaKnown RBP8.51□□□□□ -1.05
RNFT1P3-201ENST00000340898 SMTNP53814 917 aa8.51□□□□□ -1.05
RNFT1P3-201ENST00000340898 NOM1Q5C9Z4 860 aaKnown RBP8.51□□□□□ -1.05
RNFT1P3-201ENST00000340898 NME9Q86XW9 330 aa8.51□□□□□ -1.05
RNFT1P3-201ENST00000340898 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.51□□□□□ -1.05
RNFT1P3-201ENST00000340898 STRN4Q9NRL3 753 aa8.51□□□□□ -1.05
RNFT1P3-201ENST00000340898 SCHIP1Q9P0W5 487 aaPredicted RBP8.51□□□□□ -1.05
RNFT1P3-201ENST00000340898 CHMP3Q9Y3E7 222 aa8.51□□□□□ -1.05
RNFT1P3-201ENST00000340898 SPATA31A5Q5VU36 1347 aa8.51□□□□□ -1.05
RNFT1P3-201ENST00000340898 SPATA31A7Q8IWB4 1347 aa8.51□□□□□ -1.05
RNFT1P3-201ENST00000340898 BRD4O60885 1362 aaPredicted RBP8.5□□□□□ -1.05
RNFT1P3-201ENST00000340898 USP47Q96K76 1375 aa8.5□□□□□ -1.05
RNFT1P3-201ENST00000340898 FOXK2Q01167 660 aa8.5□□□□□ -1.05
RNFT1P3-201ENST00000340898 MTMR3Q13615 1198 aa8.5□□□□□ -1.05
RNFT1P3-201ENST00000340898 FAM182BQ5T319 152 aa8.5□□□□□ -1.05
RNFT1P3-201ENST00000340898 TRIM67Q6ZTA4 783 aa8.5□□□□□ -1.05
RNFT1P3-201ENST00000340898 STAG2Q8N3U4 1231 aa8.5□□□□□ -1.05
RNFT1P3-201ENST00000340898 ITPKCQ96DU7 683 aa8.5□□□□□ -1.05
RNFT1P3-201ENST00000340898 XAGE2Q96GT9 111 aa8.5□□□□□ -1.05
RNFT1P3-201ENST00000340898 PUS7Q96PZ0 661 aaKnown RBP8.5□□□□□ -1.05
RNFT1P3-201ENST00000340898 SPATA31A1Q5TZJ5 1347 aa8.5□□□□□ -1.05
RNFT1P3-201ENST00000340898 LMO7Q8WWI1 1683 aa8.49□□□□□ -1.05
RNFT1P3-201ENST00000340898 SLIT3O75094 1523 aa8.49□□□□□ -1.05
RNFT1P3-201ENST00000340898 CPDO75976 1380 aa8.49□□□□□ -1.05
RNFT1P3-201ENST00000340898 MON2Q7Z3U7 1717 aa8.49□□□□□ -1.05
RNFT1P3-201ENST00000340898 COL18A1P39060 1754 aa8.49□□□□□ -1.05
RNFT1P3-201ENST00000340898 ADH1AP07327 375 aa8.49□□□□□ -1.05
RNFT1P3-201ENST00000340898 FBLN1P23142 703 aa8.49□□□□□ -1.05
RNFT1P3-201ENST00000340898 ARHGAP4P98171 946 aa8.49□□□□□ -1.05
RNFT1P3-201ENST00000340898 MTFR1Q15390 333 aa8.49□□□□□ -1.05
RNFT1P3-201ENST00000340898 ECM1Q16610 540 aa8.49□□□□□ -1.05
RNFT1P3-201ENST00000340898 C16orf46Q6P387 395 aa8.49□□□□□ -1.05
RNFT1P3-201ENST00000340898 ARHGEF25Q86VW2 580 aa8.49□□□□□ -1.05
RNFT1P3-201ENST00000340898 NPAS4Q8IUM7 802 aa8.49□□□□□ -1.05
RNFT1P3-201ENST00000340898 SLC9A9Q8IVB4 645 aa8.49□□□□□ -1.05
RNFT1P3-201ENST00000340898 ASB16Q96NS5 453 aa8.49□□□□□ -1.05
RNFT1P3-201ENST00000340898 ARHGEF10LQ9HCE6 1279 aa8.49□□□□□ -1.05
RNFT1P3-201ENST00000340898 RAB6BQ9NRW1 208 aa8.49□□□□□ -1.05
RNFT1P3-201ENST00000340898 USP35Q9P2H5 1018 aa8.49□□□□□ -1.05
RNFT1P3-201ENST00000340898 A0A1W2PP64 1363 aa8.48□□□□□ -1.05
RNFT1P3-201ENST00000340898 RGPD5Q99666 1765 aa8.48□□□□□ -1.05
RNFT1P3-201ENST00000340898 A0A1W2PRU2 124 aa8.48□□□□□ -1.05
RNFT1P3-201ENST00000340898 UNCXA6NJT0 531 aa8.48□□□□□ -1.05
RNFT1P3-201ENST00000340898 CDK2AP1O14519 115 aa8.48□□□□□ -1.05
RNFT1P3-201ENST00000340898 ZNF16P17020 682 aaPredicted RBP8.48□□□□□ -1.05
RNFT1P3-201ENST00000340898 NPR3P17342 541 aa8.48□□□□□ -1.05
RNFT1P3-201ENST00000340898 EVA1CP58658 441 aa8.48□□□□□ -1.05
RNFT1P3-201ENST00000340898 PSMA6P60900 246 aaKnown RBP8.48□□□□□ -1.05
RNFT1P3-201ENST00000340898 Q6ZVU0 165 aa8.48□□□□□ -1.05
RNFT1P3-201ENST00000340898 GIPC2Q8TF65 315 aa8.48□□□□□ -1.05
RNFT1P3-201ENST00000340898 C2orf49Q9BVC5 232 aaPredicted RBP8.48□□□□□ -1.05
RNFT1P3-201ENST00000340898 KLF16Q9BXK1 252 aaPredicted RBP8.48□□□□□ -1.05
RNFT1P3-201ENST00000340898 TTC21AQ8NDW8 1320 aa8.48□□□□□ -1.05
RNFT1P3-201ENST00000340898 UPP2O95045 317 aa8.47□□□□□ -1.05
RNFT1P3-201ENST00000340898 TIMP2P16035 220 aa8.47□□□□□ -1.05
RNFT1P3-201ENST00000340898 CBLBQ13191 982 aa8.47□□□□□ -1.05
RNFT1P3-201ENST00000340898 TLR1Q15399 786 aa8.47□□□□□ -1.05
RNFT1P3-201ENST00000340898 TBCELQ5QJ74 424 aa8.47□□□□□ -1.05
RNFT1P3-201ENST00000340898 KRT27Q7Z3Y8 459 aa8.47□□□□□ -1.05
RNFT1P3-201ENST00000340898 HDGFL2Q7Z4V5 671 aaPredicted RBP8.47□□□□□ -1.05
RNFT1P3-201ENST00000340898 NBPF15Q8N660 670 aa8.47□□□□□ -1.05
RNFT1P3-201ENST00000340898 HPS1Q92902 700 aa8.47□□□□□ -1.05
RNFT1P3-201ENST00000340898 CNKSR1Q969H4 720 aa8.47□□□□□ -1.05
RNFT1P3-201ENST00000340898 ESYT1Q9BSJ8 1104 aa8.47□□□□□ -1.05
RNFT1P3-201ENST00000340898 ZFAND3Q9H8U3 227 aa8.47□□□□□ -1.05
RNFT1P3-201ENST00000340898 AATKQ6ZMQ8 1374 aa8.47□□□□□ -1.05
RNFT1P3-201ENST00000340898 USP31Q70CQ4 1352 aa8.47□□□□□ -1.05
RNFT1P3-201ENST00000340898 NFAT5O94916 1531 aa8.46□□□□□ -1.05
RNFT1P3-201ENST00000340898 C11orf95C9JLR9 678 aaPredicted RBP8.46□□□□□ -1.06
RNFT1P3-201ENST00000340898 CAPN5O15484 640 aaPredicted RBP8.46□□□□□ -1.06
RNFT1P3-201ENST00000340898 IL2RAP01589 272 aa8.46□□□□□ -1.06
RNFT1P3-201ENST00000340898 HSPA5P11021 654 aaKnown RBP8.46□□□□□ -1.06
RNFT1P3-201ENST00000340898 PTGIRP43119 386 aa8.46□□□□□ -1.06
RNFT1P3-201ENST00000340898 TMF1P82094 1093 aa8.46□□□□□ -1.06
RNFT1P3-201ENST00000340898 NLRP3Q96P20 1036 aa8.46□□□□□ -1.06
RNFT1P3-201ENST00000340898 TERF2IPQ9NYB0 399 aa8.46□□□□□ -1.06
RNFT1P3-201ENST00000340898 SRCAPQ6ZRS2 3230 aa8.46□□□□□ -1.06
RNFT1P3-201ENST00000340898 COL5A2P05997 1499 aaPredicted RBP8.45□□□□□ -1.06
RNFT1P3-201ENST00000340898 FAM187AA6NFU0 413 aa8.45□□□□□ -1.06
RNFT1P3-201ENST00000340898 NDUFB5O43674 189 aa8.45□□□□□ -1.06
RNFT1P3-201ENST00000340898 CLN3Q13286 438 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms