RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 ADARB2Q9NS39 739 aaKnown RBP23.9■■□□□ 1.42
SYNE4-202ENST00000340477 USP17L3A6NCW0 530 aa23.89■■□□□ 1.41
SYNE4-202ENST00000340477 USP17L4A6NCW7 530 aa23.89■■□□□ 1.41
SYNE4-202ENST00000340477 WTIPA6NIX2 430 aaPredicted RBP23.89■■□□□ 1.41
SYNE4-202ENST00000340477 H7C1D1 291 aa23.89■■□□□ 1.41
SYNE4-202ENST00000340477 EYA2O00167 538 aa23.89■■□□□ 1.41
SYNE4-202ENST00000340477 SRGAP3O43295 1099 aa23.89■■□□□ 1.41
SYNE4-202ENST00000340477 EPS15P42566 896 aa23.89■■□□□ 1.41
SYNE4-202ENST00000340477 LRRC24Q50LG9 513 aa23.89■■□□□ 1.41
SYNE4-202ENST00000340477 USP50Q70EL3 339 aaPredicted RBP23.89■■□□□ 1.41
SYNE4-202ENST00000340477 USP17L1Q7RTZ2 530 aa23.89■■□□□ 1.41
SYNE4-202ENST00000340477 DPF2Q92785 391 aa23.89■■□□□ 1.41
SYNE4-202ENST00000340477 RLBP1P12271 317 aa23.88■■□□□ 1.41
SYNE4-202ENST00000340477 KLRK1P26718 216 aa23.88■■□□□ 1.41
SYNE4-202ENST00000340477 RFX5P48382 616 aaPredicted RBP23.88■■□□□ 1.41
SYNE4-202ENST00000340477 PTPN12Q05209 780 aaKnown RBP23.88■■□□□ 1.41
SYNE4-202ENST00000340477 SIL1Q9H173 461 aa23.88■■□□□ 1.41
SYNE4-202ENST00000340477 CIAO1O76071 339 aa23.87■■□□□ 1.41
SYNE4-202ENST00000340477 VIL1P09327 827 aaKnown RBP23.87■■□□□ 1.41
SYNE4-202ENST00000340477 HSPA6P17066 643 aa23.87■■□□□ 1.41
SYNE4-202ENST00000340477 MTX1Q13505 466 aa23.87■■□□□ 1.41
SYNE4-202ENST00000340477 RSBN1LQ6PCB5 846 aaPredicted RBP23.87■■□□□ 1.41
SYNE4-202ENST00000340477 TXNRD3Q86VQ6 643 aa23.87■■□□□ 1.41
SYNE4-202ENST00000340477 PANK1Q8TE04 598 aa23.87■■□□□ 1.41
SYNE4-202ENST00000340477 KCNQ5Q9NR82 932 aa23.87■■□□□ 1.41
SYNE4-202ENST00000340477 CNOT7Q9UIV1 285 aaKnown RBP23.87■■□□□ 1.41
SYNE4-202ENST00000340477 ZBTB12Q9Y330 459 aaPredicted RBP23.87■■□□□ 1.41
SYNE4-202ENST00000340477 ZNF609O15014 1411 aa23.86■■□□□ 1.41
SYNE4-202ENST00000340477 ADAMTSL1Q8N6G6 1762 aa23.86■■□□□ 1.41
SYNE4-202ENST00000340477 SNAP23O00161 211 aa23.86■■□□□ 1.41
SYNE4-202ENST00000340477 PDE8BO95263 885 aa23.86■■□□□ 1.41
SYNE4-202ENST00000340477 VPS37DQ86XT2 251 aa23.86■■□□□ 1.41
SYNE4-202ENST00000340477 MICALL2Q8IY33 904 aa23.86■■□□□ 1.41
SYNE4-202ENST00000340477 AGBL3Q8NEM8 1001 aa23.86■■□□□ 1.41
SYNE4-202ENST00000340477 CHMP4BQ9H444 224 aaKnown RBP23.86■■□□□ 1.41
SYNE4-202ENST00000340477 MYO3BQ8WXR4 1341 aa23.85■■□□□ 1.41
SYNE4-202ENST00000340477 PUM3Q15397 648 aaKnown RBP23.85■■□□□ 1.41
SYNE4-202ENST00000340477 STRIP1Q5VSL9 837 aa23.85■■□□□ 1.41
SYNE4-202ENST00000340477 COPRSQ9NQ92 184 aa23.85■■□□□ 1.41
SYNE4-202ENST00000340477 POTEIP0CG38 1075 aa23.84■■□□□ 1.41
SYNE4-202ENST00000340477 POTEJP0CG39 1038 aa23.84■■□□□ 1.41
SYNE4-202ENST00000340477 IL15P40933 162 aaPredicted RBP23.84■■□□□ 1.41
SYNE4-202ENST00000340477 CAVIN4Q5BKX8 364 aa23.84■■□□□ 1.41
SYNE4-202ENST00000340477 CD209Q9NNX6 404 aa23.84■■□□□ 1.41
SYNE4-202ENST00000340477 CEP126Q9P2H0 1117 aa23.84■■□□□ 1.41
SYNE4-202ENST00000340477 DDX19BQ9UMR2 479 aa23.84■■□□□ 1.41
SYNE4-202ENST00000340477 IFIT1P09914 478 aaKnown RBP23.83■■□□□ 1.41
SYNE4-202ENST00000340477 SLC5A1P13866 664 aa23.83■■□□□ 1.41
SYNE4-202ENST00000340477 IRS2Q9Y4H2 1338 aa23.83■■□□□ 1.4
SYNE4-202ENST00000340477 ZBTB7BO15156 539 aaPredicted RBP23.82■■□□□ 1.4
SYNE4-202ENST00000340477 HIBADHP31937 336 aaKnown RBP23.82■■□□□ 1.4
SYNE4-202ENST00000340477 MVPQ14764 893 aaKnown RBP23.82■■□□□ 1.4
SYNE4-202ENST00000340477 TTLL5Q6EMB2 1281 aa23.82■■□□□ 1.4
SYNE4-202ENST00000340477 VGLL2Q8N8G2 317 aa23.82■■□□□ 1.4
SYNE4-202ENST00000340477 PA2G4Q9UQ80 394 aaKnown RBP23.82■■□□□ 1.4
SYNE4-202ENST00000340477 IL1R1P14778 569 aa23.81■■□□□ 1.4
SYNE4-202ENST00000340477 APLP1P51693 650 aa23.81■■□□□ 1.4
SYNE4-202ENST00000340477 GTF2IP78347 998 aa23.81■■□□□ 1.4
SYNE4-202ENST00000340477 DACT2Q5SW24 774 aa23.81■■□□□ 1.4
SYNE4-202ENST00000340477 ATG9AQ7Z3C6 839 aa23.81■■□□□ 1.4
SYNE4-202ENST00000340477 C1orf115Q9H7X2 142 aa23.81■■□□□ 1.4
SYNE4-202ENST00000340477 ZNF646O15015 1829 aaPredicted RBP23.81■■□□□ 1.4
SYNE4-202ENST00000340477 USP17L8P0C7I0 530 aa23.8■■□□□ 1.4
SYNE4-202ENST00000340477 GYG1P46976 350 aa23.8■■□□□ 1.4
SYNE4-202ENST00000340477 PDE3AQ14432 1141 aa23.8■■□□□ 1.4
SYNE4-202ENST00000340477 OGFOD1Q8N543 542 aa23.8■■□□□ 1.4
SYNE4-202ENST00000340477 LPIN2Q92539 896 aa23.8■■□□□ 1.4
SYNE4-202ENST00000340477 FRAT2O75474 233 aaPredicted RBP23.79■■□□□ 1.4
SYNE4-202ENST00000340477 G3BP1Q13283 466 aaKnown RBP eCLIP23.79■■□□□ 1.4
SYNE4-202ENST00000340477 ATP2B3Q16720 1220 aa23.79■■□□□ 1.4
SYNE4-202ENST00000340477 COG6Q9Y2V7 657 aa23.79■■□□□ 1.4
SYNE4-202ENST00000340477 MYH13Q9UKX3 1938 aa23.78■■□□□ 1.4
SYNE4-202ENST00000340477 MMP14P50281 582 aa23.78■■□□□ 1.4
SYNE4-202ENST00000340477 KIF4BQ2VIQ3 1234 aa23.78■■□□□ 1.4
SYNE4-202ENST00000340477 TBC1D10BQ4KMP7 808 aaPredicted RBP23.78■■□□□ 1.4
SYNE4-202ENST00000340477 MAP1SQ66K74 1059 aaPredicted RBP23.78■■□□□ 1.4
SYNE4-202ENST00000340477 ZC3H15Q8WU90 426 aaKnown RBP23.78■■□□□ 1.4
SYNE4-202ENST00000340477 FAM84BQ96KN1 310 aaPredicted RBP23.78■■□□□ 1.4
SYNE4-202ENST00000340477 HDAC9Q9UKV0 1011 aa23.78■■□□□ 1.4
SYNE4-202ENST00000340477 PNMA6EA0A0J9YXQ4 647 aa23.77■■□□□ 1.4
SYNE4-202ENST00000340477 ATP8B2P98198 1209 aa23.77■■□□□ 1.4
SYNE4-202ENST00000340477 OS9Q13438 667 aaPredicted RBP23.77■■□□□ 1.4
SYNE4-202ENST00000340477 RBM26Q5T8P6 1007 aaKnown RBP23.77■■□□□ 1.4
SYNE4-202ENST00000340477 SAMD7Q7Z3H4 446 aa23.77■■□□□ 1.4
SYNE4-202ENST00000340477 CNTROBQ8N137 903 aa23.77■■□□□ 1.4
SYNE4-202ENST00000340477 TRPM4Q8TD43 1214 aa23.77■■□□□ 1.4
SYNE4-202ENST00000340477 AKAP2Q9Y2D5 859 aa23.77■■□□□ 1.4
SYNE4-202ENST00000340477 ARAP2Q8WZ64 1704 aa23.76■■□□□ 1.39
SYNE4-202ENST00000340477 SHTN1A0MZ66 631 aa23.76■■□□□ 1.39
SYNE4-202ENST00000340477 SASH1O94885 1247 aa23.76■■□□□ 1.39
SYNE4-202ENST00000340477 FGFR2P21802 821 aa23.76■■□□□ 1.39
SYNE4-202ENST00000340477 ZNF280AP59817 542 aaPredicted RBP23.76■■□□□ 1.39
SYNE4-202ENST00000340477 GMLQ99445 158 aa23.76■■□□□ 1.39
SYNE4-202ENST00000340477 TDRD7Q8NHU6 1098 aaKnown RBP23.75■■□□□ 1.39
SYNE4-202ENST00000340477 GNL3LQ9NVN8 582 aaKnown RBP23.75■■□□□ 1.39
SYNE4-202ENST00000340477 FKBP1AP62942 108 aaKnown RBP23.74■■□□□ 1.39
SYNE4-202ENST00000340477 POLA2Q14181 598 aa23.74■■□□□ 1.39
SYNE4-202ENST00000340477 FBXO33Q7Z6M2 555 aa23.74■■□□□ 1.39
SYNE4-202ENST00000340477 SSH3Q8TE77 659 aa23.74■■□□□ 1.39
SYNE4-202ENST00000340477 MXD3Q9BW11 206 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms