RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 CELF1Q92879 486 aaKnown RBP12.06□□□□□ -0.48
ARHGEF3-202ENST00000338458 TAF1P21675 1872 aa12.06□□□□□ -0.48
ARHGEF3-202ENST00000338458 EPB41L2O43491 1005 aaKnown RBP12.06□□□□□ -0.48
ARHGEF3-202ENST00000338458 TRAPPC3LQ5T215 181 aa12.06□□□□□ -0.48
ARHGEF3-202ENST00000338458 ZSWIM6Q9HCJ5 1215 aa12.06□□□□□ -0.48
ARHGEF3-202ENST00000338458 PIH1D3Q9NQM4 214 aaKnown RBP12.06□□□□□ -0.48
ARHGEF3-202ENST00000338458 ZDHHC9Q9Y397 364 aa12.06□□□□□ -0.48
ARHGEF3-202ENST00000338458 ABCC12Q96J65 1359 aa12.06□□□□□ -0.48
ARHGEF3-202ENST00000338458 PPFIA3O75145 1194 aa12.06□□□□□ -0.48
ARHGEF3-202ENST00000338458 SLC5A1P13866 664 aa12.06□□□□□ -0.48
ARHGEF3-202ENST00000338458 NCLP19338 710 aaKnown RBP12.06□□□□□ -0.48
ARHGEF3-202ENST00000338458 NUCB2P80303 420 aa12.06□□□□□ -0.48
ARHGEF3-202ENST00000338458 LPIN2Q92539 896 aa12.06□□□□□ -0.48
ARHGEF3-202ENST00000338458 CWC22Q9HCG8 908 aaKnown RBP12.06□□□□□ -0.48
ARHGEF3-202ENST00000338458 MROH5Q6ZUA9 1318 aa12.06□□□□□ -0.48
ARHGEF3-202ENST00000338458 BAG4O95429 457 aaKnown RBP12.05□□□□□ -0.48
ARHGEF3-202ENST00000338458 HSPD1P10809 573 aaKnown RBP12.05□□□□□ -0.48
ARHGEF3-202ENST00000338458 ANKRD18AQ8IVF6 992 aa12.05□□□□□ -0.48
ARHGEF3-202ENST00000338458 APPP05067 770 aa12.05□□□□□ -0.48
ARHGEF3-202ENST00000338458 PSMA5P28066 241 aa12.05□□□□□ -0.48
ARHGEF3-202ENST00000338458 KRT27Q7Z3Y8 459 aa12.05□□□□□ -0.48
ARHGEF3-202ENST00000338458 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.05□□□□□ -0.48
ARHGEF3-202ENST00000338458 GYG1P46976 350 aa12.05□□□□□ -0.48
ARHGEF3-202ENST00000338458 ME3Q16798 604 aa12.05□□□□□ -0.48
ARHGEF3-202ENST00000338458 HELLSQ9NRZ9 838 aa12.05□□□□□ -0.48
ARHGEF3-202ENST00000338458 WWC3Q9ULE0 1092 aa12.05□□□□□ -0.48
ARHGEF3-202ENST00000338458 TPCN1Q9ULQ1 816 aa12.05□□□□□ -0.48
ARHGEF3-202ENST00000338458 U3KPZ7 1027 aaPredicted RBP12.05□□□□□ -0.48
ARHGEF3-202ENST00000338458 HSP90B1P14625 803 aaKnown RBP12.04□□□□□ -0.48
ARHGEF3-202ENST00000338458 CUL4AQ13619 759 aa12.04□□□□□ -0.48
ARHGEF3-202ENST00000338458 CDC5LQ99459 802 aaKnown RBP12.04□□□□□ -0.48
ARHGEF3-202ENST00000338458 HMG20BQ9P0W2 317 aa12.04□□□□□ -0.48
ARHGEF3-202ENST00000338458 RASGRF1Q13972 1273 aa12.04□□□□□ -0.48
ARHGEF3-202ENST00000338458 STOX1Q6ZVD7 989 aa12.04□□□□□ -0.48
ARHGEF3-202ENST00000338458 STK11IPQ8N1F8 1099 aa12.04□□□□□ -0.48
ARHGEF3-202ENST00000338458 NLRP3Q96P20 1036 aa12.04□□□□□ -0.48
ARHGEF3-202ENST00000338458 NEK1Q96PY6 1258 aa12.04□□□□□ -0.48
ARHGEF3-202ENST00000338458 JAG2Q9Y219 1238 aa12.04□□□□□ -0.48
ARHGEF3-202ENST00000338458 ABCF2Q9UG63 623 aa12.04□□□□□ -0.48
ARHGEF3-202ENST00000338458 SMC3Q9UQE7 1217 aa12.04□□□□□ -0.48
ARHGEF3-202ENST00000338458 COL4A1P02462 1669 aa12.03□□□□□ -0.48
ARHGEF3-202ENST00000338458 DDX11L8A8MPP1 907 aa12.03□□□□□ -0.48
ARHGEF3-202ENST00000338458 RC3H1Q5TC82 1133 aaKnown RBP12.03□□□□□ -0.48
ARHGEF3-202ENST00000338458 TPTE2Q6XPS3 522 aa12.03□□□□□ -0.48
ARHGEF3-202ENST00000338458 BCL11BQ9C0K0 894 aaPredicted RBP12.03□□□□□ -0.48
ARHGEF3-202ENST00000338458 TAOK2Q9UL54 1235 aa12.03□□□□□ -0.48
ARHGEF3-202ENST00000338458 RPS6KB1P23443 525 aa12.03□□□□□ -0.48
ARHGEF3-202ENST00000338458 SPATA5Q8NB90 893 aa12.03□□□□□ -0.48
ARHGEF3-202ENST00000338458 SPEF2Q9C093 1822 aa12.03□□□□□ -0.48
ARHGEF3-202ENST00000338458 GPAA1O43292 621 aa12.03□□□□□ -0.48
ARHGEF3-202ENST00000338458 FGFR2P21802 821 aa12.03□□□□□ -0.48
ARHGEF3-202ENST00000338458 VPS37DQ86XT2 251 aa12.03□□□□□ -0.48
ARHGEF3-202ENST00000338458 GDPD2Q9HCC8 539 aa12.03□□□□□ -0.48
ARHGEF3-202ENST00000338458 ZNF532Q9HCE3 1301 aa12.03□□□□□ -0.48
ARHGEF3-202ENST00000338458 ATRNO75882 1429 aa12.02□□□□□ -0.48
ARHGEF3-202ENST00000338458 COL5A3P25940 1745 aaPredicted RBP12.02□□□□□ -0.48
ARHGEF3-202ENST00000338458 GOLGA6L22H0YM25 854 aa12.02□□□□□ -0.48
ARHGEF3-202ENST00000338458 ONECUT3O60422 494 aaPredicted RBP12.02□□□□□ -0.48
ARHGEF3-202ENST00000338458 PRPF40AO75400 957 aaKnown RBP12.02□□□□□ -0.48
ARHGEF3-202ENST00000338458 Q6ZUG5 572 aa12.02□□□□□ -0.48
ARHGEF3-202ENST00000338458 KCNB2Q92953 911 aa12.02□□□□□ -0.48
ARHGEF3-202ENST00000338458 TM6SF1Q9BZW5 370 aa12.02□□□□□ -0.48
ARHGEF3-202ENST00000338458 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.02□□□□□ -0.48
ARHGEF3-202ENST00000338458 NFIXQ14938 502 aa12.02□□□□□ -0.49
ARHGEF3-202ENST00000338458 MAGEB6Q8N7X4 407 aa12.02□□□□□ -0.49
ARHGEF3-202ENST00000338458 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.02□□□□□ -0.49
ARHGEF3-202ENST00000338458 APPBP2Q92624 585 aa12.02□□□□□ -0.49
ARHGEF3-202ENST00000338458 BRF1Q92994 677 aa12.02□□□□□ -0.49
ARHGEF3-202ENST00000338458 IL17RAQ96F46 866 aa12.02□□□□□ -0.49
ARHGEF3-202ENST00000338458 TFCP2L1Q9NZI6 479 aa12.02□□□□□ -0.49
ARHGEF3-202ENST00000338458 THSD7AQ9UPZ6 1657 aa12.02□□□□□ -0.49
ARHGEF3-202ENST00000338458 KLRK1P26718 216 aa12.01□□□□□ -0.49
ARHGEF3-202ENST00000338458 GJB2P29033 226 aa12.01□□□□□ -0.49
ARHGEF3-202ENST00000338458 FOSBP53539 338 aa12.01□□□□□ -0.49
ARHGEF3-202ENST00000338458 TOB2Q14106 344 aaPredicted RBP12.01□□□□□ -0.49
ARHGEF3-202ENST00000338458 LRRFIP1Q32MZ4 808 aaKnown RBP12.01□□□□□ -0.49
ARHGEF3-202ENST00000338458 RAB11FIP4Q86YS3 637 aa12.01□□□□□ -0.49
ARHGEF3-202ENST00000338458 RPAP1Q9BWH6 1393 aaPredicted RBP12.01□□□□□ -0.49
ARHGEF3-202ENST00000338458 VPS37CA5D8V6 355 aaPredicted RBP12.01□□□□□ -0.49
ARHGEF3-202ENST00000338458 FGAP02671 866 aa12.01□□□□□ -0.49
ARHGEF3-202ENST00000338458 UQCRFS1P1P0C7P4 283 aa12.01□□□□□ -0.49
ARHGEF3-202ENST00000338458 PDE6AP16499 860 aa12.01□□□□□ -0.49
ARHGEF3-202ENST00000338458 MIGA1Q8NAN2 632 aa12.01□□□□□ -0.49
ARHGEF3-202ENST00000338458 INTS4Q96HW7 963 aaKnown RBP12.01□□□□□ -0.49
ARHGEF3-202ENST00000338458 NYXQ9GZU5 481 aa12.01□□□□□ -0.49
ARHGEF3-202ENST00000338458 LRP2BPQ9P2M1 347 aa12.01□□□□□ -0.49
ARHGEF3-202ENST00000338458 MINPP1Q9UNW1 487 aa12.01□□□□□ -0.49
ARHGEF3-202ENST00000338458 DDX49Q9Y6V7 483 aaKnown RBP12.01□□□□□ -0.49
ARHGEF3-202ENST00000338458 GOLGB1Q14789 3259 aaKnown RBP12.01□□□□□ -0.49
ARHGEF3-202ENST00000338458 RPS8P62241 208 aaKnown RBP12□□□□□ -0.49
ARHGEF3-202ENST00000338458 ST3GAL1Q11201 340 aa12□□□□□ -0.49
ARHGEF3-202ENST00000338458 GPHNQ9NQX3 736 aaPredicted RBP12□□□□□ -0.49
ARHGEF3-202ENST00000338458 DDX60Q8IY21 1712 aaKnown RBP12□□□□□ -0.49
ARHGEF3-202ENST00000338458 MYO5AQ9Y4I1 1855 aaKnown RBP12□□□□□ -0.49
ARHGEF3-202ENST00000338458 E7EWF7 191 aa12□□□□□ -0.49
ARHGEF3-202ENST00000338458 ADD2P35612 726 aa12□□□□□ -0.49
ARHGEF3-202ENST00000338458 DSCC1Q9BVC3 393 aa12□□□□□ -0.49
ARHGEF3-202ENST00000338458 ZSCAN21Q9Y5A6 473 aaPredicted RBP12□□□□□ -0.49
ARHGEF3-202ENST00000338458 ZFYP08048 801 aaPredicted RBP12□□□□□ -0.49
ARHGEF3-202ENST00000338458 ARID4AP29374 1257 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms