RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 KIF23Q02241 960 aaPredicted RBP31.24■■■□□ 2.59
CDKN3-202ENST00000335183 FBXW7Q969H0 707 aa31.24■■■□□ 2.59
CDKN3-202ENST00000335183 CCT4P50991 539 aaKnown RBP31.23■■■□□ 2.59
CDKN3-202ENST00000335183 FAM161AQ3B820 660 aa31.23■■■□□ 2.59
CDKN3-202ENST00000335183 H7C1W4 665 aa31.22■■■□□ 2.59
CDKN3-202ENST00000335183 IGHMBP2P38935 993 aaKnown RBP31.21■■■□□ 2.59
CDKN3-202ENST00000335183 DGKZQ13574 1117 aa31.21■■■□□ 2.59
CDKN3-202ENST00000335183 SCAF8Q9UPN6 1271 aaKnown RBP31.21■■■□□ 2.59
CDKN3-202ENST00000335183 SLC10A3P09131 477 aa31.2■■■□□ 2.59
CDKN3-202ENST00000335183 MXD3Q9BW11 206 aa31.2■■■□□ 2.59
CDKN3-202ENST00000335183 PAPPA2Q9BXP8 1791 aa31.2■■■□□ 2.58
CDKN3-202ENST00000335183 FLIIQ13045 1269 aa31.19■■■□□ 2.58
CDKN3-202ENST00000335183 IL16Q14005 1332 aa31.19■■■□□ 2.58
CDKN3-202ENST00000335183 PITPNM2Q9BZ72 1349 aa31.19■■■□□ 2.58
CDKN3-202ENST00000335183 FKBP5Q13451 457 aaPredicted RBP31.18■■■□□ 2.58
CDKN3-202ENST00000335183 GCKRQ14397 625 aa31.18■■■□□ 2.58
CDKN3-202ENST00000335183 ITGA6P23229 1130 aa31.17■■■□□ 2.58
CDKN3-202ENST00000335183 DACT2Q5SW24 774 aa31.17■■■□□ 2.58
CDKN3-202ENST00000335183 COA1Q9GZY4 146 aa31.17■■■□□ 2.58
CDKN3-202ENST00000335183 SAGE1Q9NXZ1 904 aa31.17■■■□□ 2.58
CDKN3-202ENST00000335183 LEMD3Q9Y2U8 911 aa31.17■■■□□ 2.58
CDKN3-202ENST00000335183 TRPA1O75762 1119 aa31.16■■■□□ 2.58
CDKN3-202ENST00000335183 NBPF9Q3BBW0 867 aa31.16■■■□□ 2.58
CDKN3-202ENST00000335183 TXNRD3Q86VQ6 643 aa31.16■■■□□ 2.58
CDKN3-202ENST00000335183 DNAAF4Q8WXU2 420 aa31.16■■■□□ 2.58
CDKN3-202ENST00000335183 MPHOSPH8Q99549 860 aa31.16■■■□□ 2.58
CDKN3-202ENST00000335183 MYH16Q9H6N6 1097 aa31.16■■■□□ 2.58
CDKN3-202ENST00000335183 RNF186Q9NXI6 227 aa31.16■■■□□ 2.58
CDKN3-202ENST00000335183 OGFOD1Q8N543 542 aa31.15■■■□□ 2.58
CDKN3-202ENST00000335183 PLA2G12BQ9BX93 195 aa31.15■■■□□ 2.58
CDKN3-202ENST00000335183 SALL2Q9Y467 1007 aaPredicted RBP31.15■■■□□ 2.58
CDKN3-202ENST00000335183 FANCIQ9NVI1 1328 aa31.15■■■□□ 2.58
CDKN3-202ENST00000335183 FKBP1BP68106 108 aa31.14■■■□□ 2.58
CDKN3-202ENST00000335183 STRIP1Q5VSL9 837 aa31.14■■■□□ 2.58
CDKN3-202ENST00000335183 RASAL3Q86YV0 1011 aa31.14■■■□□ 2.58
CDKN3-202ENST00000335183 CSRNP1Q96S65 589 aa31.14■■■□□ 2.58
CDKN3-202ENST00000335183 MRS2Q9HD23 443 aa31.14■■■□□ 2.58
CDKN3-202ENST00000335183 ZNF804BA4D1E1 1349 aa31.14■■■□□ 2.58
CDKN3-202ENST00000335183 MYO3BQ8WXR4 1341 aa31.14■■■□□ 2.58
CDKN3-202ENST00000335183 MLLT1Q03111 559 aaPredicted RBP31.13■■■□□ 2.57
CDKN3-202ENST00000335183 PRAMEF18Q5VWM3 479 aa31.13■■■□□ 2.57
CDKN3-202ENST00000335183 MOB2Q70IA6 237 aa31.13■■■□□ 2.57
CDKN3-202ENST00000335183 ANKRD2Q9GZV1 360 aa31.13■■■□□ 2.57
CDKN3-202ENST00000335183 KLRK1P26718 216 aa31.12■■■□□ 2.57
CDKN3-202ENST00000335183 CASP7P55210 303 aa31.12■■■□□ 2.57
CDKN3-202ENST00000335183 LINS1Q8NG48 757 aa31.12■■■□□ 2.57
CDKN3-202ENST00000335183 KCNJ4P48050 445 aa31.11■■■□□ 2.57
CDKN3-202ENST00000335183 WNT10BO00744 389 aa31.1■■■□□ 2.57
CDKN3-202ENST00000335183 CSF1RP07333 972 aa31.1■■■□□ 2.57
CDKN3-202ENST00000335183 TTLL5Q6EMB2 1281 aa31.1■■■□□ 2.57
CDKN3-202ENST00000335183 A0A1B0GUL6 1792 aa31.1■■■□□ 2.57
CDKN3-202ENST00000335183 SASH1O94885 1247 aa31.09■■■□□ 2.57
CDKN3-202ENST00000335183 TTLL12Q14166 644 aaPredicted RBP31.09■■■□□ 2.57
CDKN3-202ENST00000335183 NCBP3Q53F19 620 aaKnown RBP31.09■■■□□ 2.57
CDKN3-202ENST00000335183 UBE2Q2LH0YL09 131 aa31.08■■■□□ 2.57
CDKN3-202ENST00000335183 VAMP4O75379 141 aa31.08■■■□□ 2.57
CDKN3-202ENST00000335183 RGS19P49795 217 aa31.08■■■□□ 2.57
CDKN3-202ENST00000335183 CHRNDQ07001 517 aa31.08■■■□□ 2.57
CDKN3-202ENST00000335183 ANKRD18BA2A2Z9 1011 aa31.07■■■□□ 2.56
CDKN3-202ENST00000335183 GTF2IP78347 998 aa31.07■■■□□ 2.56
CDKN3-202ENST00000335183 EXOSC9Q06265 439 aaKnown RBP31.07■■■□□ 2.56
CDKN3-202ENST00000335183 KIAA0825Q8IV33 1275 aa31.07■■■□□ 2.56
CDKN3-202ENST00000335183 REM2Q8IYK8 340 aaPredicted RBP31.07■■■□□ 2.56
CDKN3-202ENST00000335183 NF2P35240 595 aa31.06■■■□□ 2.56
CDKN3-202ENST00000335183 WDR63Q8IWG1 891 aa31.06■■■□□ 2.56
CDKN3-202ENST00000335183 HDAC9Q9UKV0 1011 aa31.06■■■□□ 2.56
CDKN3-202ENST00000335183 CHMP3Q9Y3E7 222 aa31.06■■■□□ 2.56
CDKN3-202ENST00000335183 F6X3S4 739 aa31.03■■■□□ 2.56
CDKN3-202ENST00000335183 TAF5LO75529 589 aa31.03■■■□□ 2.56
CDKN3-202ENST00000335183 MMP14P50281 582 aa31.03■■■□□ 2.56
CDKN3-202ENST00000335183 CD209Q9NNX6 404 aa31.03■■■□□ 2.56
CDKN3-202ENST00000335183 SNAP23O00161 211 aa31.02■■■□□ 2.56
CDKN3-202ENST00000335183 ANP32CO43423 234 aa31.02■■■□□ 2.56
CDKN3-202ENST00000335183 IFIT5Q13325 482 aaKnown RBP31.02■■■□□ 2.56
CDKN3-202ENST00000335183 HELBQ8NG08 1087 aaPredicted RBP31.02■■■□□ 2.56
CDKN3-202ENST00000335183 ECM29Q5VYK3 1845 aa31.01■■■□□ 2.56
CDKN3-202ENST00000335183 FOXO4P98177 505 aa31■■■□□ 2.55
CDKN3-202ENST00000335183 PRKG1Q13976 671 aa31■■■□□ 2.55
CDKN3-202ENST00000335183 APOBEC3FQ8IUX4 373 aaKnown RBP31■■■□□ 2.55
CDKN3-202ENST00000335183 MKRN3Q13064 507 aaKnown RBP30.99■■■□□ 2.55
CDKN3-202ENST00000335183 BEND3Q5T5X7 828 aa30.99■■■□□ 2.55
CDKN3-202ENST00000335183 CTU1Q7Z7A3 348 aaKnown RBP30.98■■■□□ 2.55
CDKN3-202ENST00000335183 ARMC9Q7Z3E5 817 aa30.97■■■□□ 2.55
CDKN3-202ENST00000335183 SPINK5Q9NQ38 1064 aaPredicted RBP30.97■■■□□ 2.55
CDKN3-202ENST00000335183 IRS2Q9Y4H2 1338 aa30.97■■■□□ 2.55
CDKN3-202ENST00000335183 DLGAP5Q15398 846 aa30.96■■■□□ 2.55
CDKN3-202ENST00000335183 TAF7LQ5H9L4 462 aa30.96■■■□□ 2.55
CDKN3-202ENST00000335183 LMBR1LQ6UX01 489 aa30.96■■■□□ 2.55
CDKN3-202ENST00000335183 ZBED3Q96IU2 234 aaPredicted RBP30.96■■■□□ 2.55
CDKN3-202ENST00000335183 TBC1D8O95759 1140 aa30.95■■■□□ 2.55
CDKN3-202ENST00000335183 ZNF804AQ7Z570 1209 aa30.95■■■□□ 2.55
CDKN3-202ENST00000335183 CERS5Q8N5B7 392 aa30.95■■■□□ 2.55
CDKN3-202ENST00000335183 ZNF594Q96JF6 807 aaPredicted RBP30.95■■■□□ 2.55
CDKN3-202ENST00000335183 F8W031 263 aaPredicted RBP30.94■■■□□ 2.54
CDKN3-202ENST00000335183 PLIN1O60240 522 aa30.94■■■□□ 2.54
CDKN3-202ENST00000335183 PTPN12Q05209 780 aaKnown RBP30.94■■■□□ 2.54
CDKN3-202ENST00000335183 CCDC57Q2TAC2 916 aa30.94■■■□□ 2.54
CDKN3-202ENST00000335183 EPHA10Q5JZY3 1008 aa30.94■■■□□ 2.54
CDKN3-202ENST00000335183 C15orf52Q6ZUT6 534 aaKnown RBP30.94■■■□□ 2.54
CDKN3-202ENST00000335183 SOX10P56693 466 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms