RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 TTLL11Q8NHH1 800 aa13.9□□□□□ -0.18
HDAC6-201ENST00000334136 PDCL3Q9H2J4 239 aa13.9□□□□□ -0.18
HDAC6-201ENST00000334136 ERICH2A1L162 156 aa13.9□□□□□ -0.19
HDAC6-201ENST00000334136 LRRC24Q50LG9 513 aa13.9□□□□□ -0.19
HDAC6-201ENST00000334136 RRP12Q5JTH9 1297 aaKnown RBP13.9□□□□□ -0.19
HDAC6-201ENST00000334136 TBC1D9Q6ZT07 1266 aa13.9□□□□□ -0.19
HDAC6-201ENST00000334136 COPRSQ9NQ92 184 aa13.9□□□□□ -0.19
HDAC6-201ENST00000334136 STK11IPQ8N1F8 1099 aa13.89□□□□□ -0.19
HDAC6-201ENST00000334136 LARGE2Q8N3Y3 721 aa13.89□□□□□ -0.19
HDAC6-201ENST00000334136 ZGPATQ8N5A5 531 aaKnown RBP13.89□□□□□ -0.19
HDAC6-201ENST00000334136 F8W031 263 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-201ENST00000334136 BBOX1O75936 387 aa13.89□□□□□ -0.19
HDAC6-201ENST00000334136 XAGE2Q96GT9 111 aa13.89□□□□□ -0.19
HDAC6-201ENST00000334136 ONECUT3O60422 494 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-201ENST00000334136 USP5P45974 858 aa13.89□□□□□ -0.19
HDAC6-201ENST00000334136 GPR162Q16538 588 aa13.89□□□□□ -0.19
HDAC6-201ENST00000334136 TTC22Q5TAA0 569 aa13.89□□□□□ -0.19
HDAC6-201ENST00000334136 OGFOD1Q8N543 542 aa13.89□□□□□ -0.19
HDAC6-201ENST00000334136 SUPT20HQ8NEM7 779 aa13.89□□□□□ -0.19
HDAC6-201ENST00000334136 SLC4A9Q96Q91 983 aa13.89□□□□□ -0.19
HDAC6-201ENST00000334136 JAG2Q9Y219 1238 aa13.89□□□□□ -0.19
HDAC6-201ENST00000334136 SLC16A10Q8TF71 515 aa13.88□□□□□ -0.19
HDAC6-201ENST00000334136 PUS3Q9BZE2 481 aaKnown RBP13.88□□□□□ -0.19
HDAC6-201ENST00000334136 FBXO3Q9UK99 471 aa13.88□□□□□ -0.19
HDAC6-201ENST00000334136 KDM2BQ8NHM5 1336 aa13.88□□□□□ -0.19
HDAC6-201ENST00000334136 USP42Q9H9J4 1324 aaKnown RBP13.88□□□□□ -0.19
HDAC6-201ENST00000334136 SPON1Q9HCB6 807 aa13.88□□□□□ -0.19
HDAC6-201ENST00000334136 CTNNA3Q9UI47 895 aa13.88□□□□□ -0.19
HDAC6-201ENST00000334136 TTC41PQ6P2S7 1318 aa13.88□□□□□ -0.19
HDAC6-201ENST00000334136 ATRNO75882 1429 aa13.88□□□□□ -0.19
HDAC6-201ENST00000334136 ALS2Q96Q42 1657 aa13.88□□□□□ -0.19
HDAC6-201ENST00000334136 BMP2KLQ5H9B9 411 aa13.88□□□□□ -0.19
HDAC6-201ENST00000334136 COL23A1Q86Y22 540 aaPredicted RBP13.88□□□□□ -0.19
HDAC6-201ENST00000334136 ZNF34Q8IZ26 560 aa13.88□□□□□ -0.19
HDAC6-201ENST00000334136 NFXL1Q6ZNB6 911 aa13.87□□□□□ -0.19
HDAC6-201ENST00000334136 BAG3O95817 575 aa13.87□□□□□ -0.19
HDAC6-201ENST00000334136 NPR1P16066 1061 aa13.87□□□□□ -0.19
HDAC6-201ENST00000334136 MCM2P49736 904 aa13.87□□□□□ -0.19
HDAC6-201ENST00000334136 CHRNDQ07001 517 aa13.87□□□□□ -0.19
HDAC6-201ENST00000334136 TPD52L1Q16890 204 aaPredicted RBP13.87□□□□□ -0.19
HDAC6-201ENST00000334136 EPHA10Q5JZY3 1008 aa13.87□□□□□ -0.19
HDAC6-201ENST00000334136 NHSL1Q5SYE7 1610 aa13.87□□□□□ -0.19
HDAC6-201ENST00000334136 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.87□□□□□ -0.19
HDAC6-201ENST00000334136 CBX1P83916 185 aa13.86□□□□□ -0.19
HDAC6-201ENST00000334136 CPLX2Q6PUV4 134 aaKnown RBP13.86□□□□□ -0.19
HDAC6-201ENST00000334136 PAG1Q9NWQ8 432 aa13.86□□□□□ -0.19
HDAC6-201ENST00000334136 COL16A1Q07092 1604 aaPredicted RBP13.86□□□□□ -0.19
HDAC6-201ENST00000334136 TRPM3Q9HCF6 1732 aaPredicted RBP13.86□□□□□ -0.19
HDAC6-201ENST00000334136 CYP7A1P22680 504 aa13.86□□□□□ -0.19
HDAC6-201ENST00000334136 PSMA5P28066 241 aa13.86□□□□□ -0.19
HDAC6-201ENST00000334136 CEBPZQ03701 1054 aaKnown RBP13.86□□□□□ -0.19
HDAC6-201ENST00000334136 HDAC9Q9UKV0 1011 aa13.86□□□□□ -0.19
HDAC6-201ENST00000334136 DENND2AQ9ULE3 1009 aa13.86□□□□□ -0.19
HDAC6-201ENST00000334136 KIF3AQ9Y496 699 aa13.86□□□□□ -0.19
HDAC6-201ENST00000334136 LRP6O75581 1613 aa13.86□□□□□ -0.19
HDAC6-201ENST00000334136 PPEF1O14829 653 aaPredicted RBP13.86□□□□□ -0.19
HDAC6-201ENST00000334136 PPIP5K2O43314 1243 aa13.86□□□□□ -0.19
HDAC6-201ENST00000334136 ATP2B4P23634 1241 aa13.86□□□□□ -0.19
HDAC6-201ENST00000334136 TMC4Q7Z404 712 aa13.86□□□□□ -0.19
HDAC6-201ENST00000334136 MASTLQ96GX5 879 aa13.86□□□□□ -0.19
HDAC6-201ENST00000334136 SHPRHQ149N8 1683 aa13.86□□□□□ -0.19
HDAC6-201ENST00000334136 PHRF1Q9P1Y6 1649 aaKnown RBP13.86□□□□□ -0.19
HDAC6-201ENST00000334136 CDHR2Q9BYE9 1310 aa13.86□□□□□ -0.19
HDAC6-201ENST00000334136 SLC9C2Q5TAH2 1124 aa13.86□□□□□ -0.19
HDAC6-201ENST00000334136 NAA16Q6N069 864 aaPredicted RBP13.86□□□□□ -0.19
HDAC6-201ENST00000334136 PDE8BO95263 885 aa13.85□□□□□ -0.19
HDAC6-201ENST00000334136 SDSP20132 328 aa13.85□□□□□ -0.19
HDAC6-201ENST00000334136 GSTO1P78417 241 aa13.85□□□□□ -0.19
HDAC6-201ENST00000334136 PLEKHM2Q8IWE5 1019 aa13.85□□□□□ -0.19
HDAC6-201ENST00000334136 TTLL6Q8N841 843 aa13.85□□□□□ -0.19
HDAC6-201ENST00000334136 BRIP1Q9BX63 1249 aa13.85□□□□□ -0.19
HDAC6-201ENST00000334136 NAPBQ9H115 298 aa13.85□□□□□ -0.19
HDAC6-201ENST00000334136 USP25Q9UHP3 1055 aa13.85□□□□□ -0.19
HDAC6-201ENST00000334136 ZHX1Q9UKY1 873 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-201ENST00000334136 MINDY4BA8MYZ0 360 aa13.85□□□□□ -0.19
HDAC6-201ENST00000334136 POLR3DP05423 398 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-201ENST00000334136 ZFYP08048 801 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-201ENST00000334136 GRAPQ13588 217 aa13.85□□□□□ -0.19
HDAC6-201ENST00000334136 SART3Q15020 963 aaKnown RBP13.85□□□□□ -0.19
HDAC6-201ENST00000334136 ARHGAP27Q6ZUM4 889 aa13.85□□□□□ -0.19
HDAC6-201ENST00000334136 GRAPLQ8TC17 118 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-201ENST00000334136 OTUD7AQ8TE49 926 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-201ENST00000334136 LARP6Q9BRS8 491 aaKnown RBP13.85□□□□□ -0.19
HDAC6-201ENST00000334136 LRRC4BQ9NT99 713 aa13.85□□□□□ -0.19
HDAC6-201ENST00000334136 WDR33Q9C0J8 1336 aaKnown RBP13.85□□□□□ -0.19
HDAC6-201ENST00000334136 CHMP4CQ96CF2 233 aa13.85□□□□□ -0.19
HDAC6-201ENST00000334136 GYS1P13807 737 aa13.84□□□□□ -0.19
HDAC6-201ENST00000334136 PTPN12Q05209 780 aaKnown RBP13.84□□□□□ -0.19
HDAC6-201ENST00000334136 PRR5LQ6MZQ0 368 aa13.84□□□□□ -0.19
HDAC6-201ENST00000334136 AKAP17AQ02040 695 aaKnown RBP13.84□□□□□ -0.19
HDAC6-201ENST00000334136 KLHL40Q2TBA0 621 aa13.84□□□□□ -0.19
HDAC6-201ENST00000334136 DHX16O60231 1041 aaKnown RBP13.84□□□□□ -0.19
HDAC6-201ENST00000334136 LDHBP07195 334 aaKnown RBP13.84□□□□□ -0.19
HDAC6-201ENST00000334136 EAF2Q96CJ1 260 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-201ENST00000334136 MTMR7Q9Y216 660 aa13.84□□□□□ -0.19
HDAC6-201ENST00000334136 XDHP47989 1333 aa13.84□□□□□ -0.19
HDAC6-201ENST00000334136 CPLX1O14810 134 aa13.83□□□□□ -0.19
HDAC6-201ENST00000334136 SOGA3Q5TF21 947 aa13.83□□□□□ -0.19
HDAC6-201ENST00000334136 GJA3Q9Y6H8 435 aa13.83□□□□□ -0.19
HDAC6-201ENST00000334136 CIAO1O76071 339 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms