RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 SDF4Q9BRK5 362 aa27.59■■■□□ 2.01
TSKU-201ENST00000333090 NAT10Q9H0A0 1025 aaKnown RBP27.59■■■□□ 2.01
TSKU-201ENST00000333090 MRC1P22897 1456 aa27.58■■■□□ 2.01
TSKU-201ENST00000333090 HMGB1P09429 215 aaKnown RBP27.58■■■□□ 2.01
TSKU-201ENST00000333090 FBXO38Q6PIJ6 1188 aa27.58■■■□□ 2.01
TSKU-201ENST00000333090 KRT222Q8N1A0 295 aa27.58■■■□□ 2.01
TSKU-201ENST00000333090 NPHP1O15259 732 aa27.58■■■□□ 2.01
TSKU-201ENST00000333090 SLFNL1Q499Z3 407 aa27.58■■■□□ 2.01
TSKU-201ENST00000333090 ARHGEF25Q86VW2 580 aa27.57■■■□□ 2
TSKU-201ENST00000333090 HAUS7Q99871 368 aa27.57■■■□□ 2
TSKU-201ENST00000333090 SLFN14P0C7P3 912 aa27.56■■■□□ 2
TSKU-201ENST00000333090 GSDMDP57764 484 aa27.56■■■□□ 2
TSKU-201ENST00000333090 SLU7O95391 586 aaKnown RBP27.56■■■□□ 2
TSKU-201ENST00000333090 RFX5P48382 616 aaPredicted RBP27.56■■■□□ 2
TSKU-201ENST00000333090 NBPF11Q86T75 865 aa27.56■■■□□ 2
TSKU-201ENST00000333090 METTL22Q9BUU2 404 aaPredicted RBP27.56■■■□□ 2
TSKU-201ENST00000333090 A0A1B0GVL5 298 aa27.55■■■□□ 2
TSKU-201ENST00000333090 PIP4K2AP48426 406 aaPredicted RBP27.55■■■□□ 2
TSKU-201ENST00000333090 ILDR1Q86SU0 546 aaPredicted RBP27.55■■■□□ 2
TSKU-201ENST00000333090 PCDHA7Q9UN72 937 aa27.55■■■□□ 2
TSKU-201ENST00000333090 ATL3Q6DD88 541 aa27.55■■■□□ 2
TSKU-201ENST00000333090 CHST3Q7LGC8 479 aa27.55■■■□□ 2
TSKU-201ENST00000333090 UBE3BQ7Z3V4 1068 aa27.55■■■□□ 2
TSKU-201ENST00000333090 MRPS27Q92552 414 aaKnown RBP27.55■■■□□ 2
TSKU-201ENST00000333090 ZRSR1Q15695 479 aaKnown RBP27.54■■■□□ 2
TSKU-201ENST00000333090 RFX7Q2KHR2 1363 aa27.54■■■□□ 2
TSKU-201ENST00000333090 KBTBD3Q8NAB2 608 aa27.54■■■□□ 2
TSKU-201ENST00000333090 A0A0G2JLW4 131 aa27.54■■■□□ 2
TSKU-201ENST00000333090 SMC2O95347 1197 aa27.54■■■□□ 2
TSKU-201ENST00000333090 FMR1NBQ8N0W7 255 aaPredicted RBP27.54■■■□□ 2
TSKU-201ENST00000333090 ZNF790Q6PG37 636 aa27.53■■■□□ 2
TSKU-201ENST00000333090 SYTL4Q96C24 671 aaPredicted RBP27.53■■■□□ 2
TSKU-201ENST00000333090 OVOS2A0A0G2JMS6 1433 aa27.53■■■□□ 2
TSKU-201ENST00000333090 DPCR1Q3MIW9 517 aa27.53■■■□□ 2
TSKU-201ENST00000333090 OSBPL5Q9H0X9 879 aaPredicted RBP27.53■■■□□ 2
TSKU-201ENST00000333090 EXOSC10Q01780 885 aaKnown RBP27.52■■■□□ 2
TSKU-201ENST00000333090 ERBB3P21860 1342 aa27.52■■■□□ 2
TSKU-201ENST00000333090 KIF2AO00139 706 aaPredicted RBP27.52■■■□□ 2
TSKU-201ENST00000333090 GOLIM4O00461 696 aa27.52■■■□□ 2
TSKU-201ENST00000333090 NDUFA8P51970 172 aa27.52■■■□□ 2
TSKU-201ENST00000333090 TERF2Q15554 542 aa27.52■■■□□ 2
TSKU-201ENST00000333090 KRT28Q7Z3Y7 464 aa27.52■■■□□ 2
TSKU-201ENST00000333090 CABLES1Q8TDN4 633 aa27.52■■■□□ 2
TSKU-201ENST00000333090 SH3TC1Q8TE82 1336 aa27.51■■■□□ 2
TSKU-201ENST00000333090 SALL1Q9NSC2 1324 aa27.51■■■□□ 2
TSKU-201ENST00000333090 E4F1Q66K89 784 aaPredicted RBP27.51■■□□□ 1.99
TSKU-201ENST00000333090 ANKRD13DQ6ZTN6 518 aa27.51■■□□□ 1.99
TSKU-201ENST00000333090 TMC6Q7Z403 805 aa27.51■■□□□ 1.99
TSKU-201ENST00000333090 FMNL2Q96PY5 1086 aa27.51■■□□□ 1.99
TSKU-201ENST00000333090 XPO4Q9C0E2 1151 aaKnown RBP27.51■■□□□ 1.99
TSKU-201ENST00000333090 PDIA3P30101 505 aaKnown RBP27.51■■□□□ 1.99
TSKU-201ENST00000333090 SF3A1Q15459 793 aaKnown RBP27.51■■□□□ 1.99
TSKU-201ENST00000333090 KCND1Q9NSA2 647 aa27.51■■□□□ 1.99
TSKU-201ENST00000333090 MYH15Q9Y2K3 1946 aa27.5■■□□□ 1.99
TSKU-201ENST00000333090 PROSER2Q86WR7 435 aaPredicted RBP27.5■■□□□ 1.99
TSKU-201ENST00000333090 IFNKQ9P0W0 207 aa27.5■■□□□ 1.99
TSKU-201ENST00000333090 IMPACTQ9P2X3 320 aa27.5■■□□□ 1.99
TSKU-201ENST00000333090 CARMIL3Q8ND23 1372 aa27.5■■□□□ 1.99
TSKU-201ENST00000333090 E7EWF7 191 aa27.5■■□□□ 1.99
TSKU-201ENST00000333090 ADALQ6DHV7 355 aa27.5■■□□□ 1.99
TSKU-201ENST00000333090 NEUROD6Q96NK8 337 aa27.5■■□□□ 1.99
TSKU-201ENST00000333090 OTUD7BQ6GQQ9 843 aa27.49■■□□□ 1.99
TSKU-201ENST00000333090 AGXT2Q9BYV1 514 aa27.49■■□□□ 1.99
TSKU-201ENST00000333090 KIAA1468Q9P260 1216 aa27.49■■□□□ 1.99
TSKU-201ENST00000333090 ATP5J2-PTCD1G3V325 749 aa27.49■■□□□ 1.99
TSKU-201ENST00000333090 BIN1O00499 593 aa27.49■■□□□ 1.99
TSKU-201ENST00000333090 PTCD1O75127 700 aaKnown RBP27.49■■□□□ 1.99
TSKU-201ENST00000333090 SYT10Q6XYQ8 523 aa27.49■■□□□ 1.99
TSKU-201ENST00000333090 PPP1R13BQ96KQ4 1090 aa27.49■■□□□ 1.99
TSKU-201ENST00000333090 STK38Q15208 465 aa27.48■■□□□ 1.99
TSKU-201ENST00000333090 ARMCX5Q6P1M9 558 aa27.48■■□□□ 1.99
TSKU-201ENST00000333090 SFPQP23246 707 aaKnown RBP eCLIP27.48■■□□□ 1.99
TSKU-201ENST00000333090 DSCC1Q9BVC3 393 aa27.48■■□□□ 1.99
TSKU-201ENST00000333090 RTEL1Q9NZ71 1219 aa27.48■■□□□ 1.99
TSKU-201ENST00000333090 POLR3DP05423 398 aaPredicted RBP27.47■■□□□ 1.99
TSKU-201ENST00000333090 ERCC6LQ2NKX8 1250 aa27.47■■□□□ 1.99
TSKU-201ENST00000333090 PAG1Q9NWQ8 432 aa27.47■■□□□ 1.99
TSKU-201ENST00000333090 A0A087WZG4 1122 aa27.47■■□□□ 1.99
TSKU-201ENST00000333090 HSPD1P10809 573 aaKnown RBP27.47■■□□□ 1.99
TSKU-201ENST00000333090 FDPSP14324 419 aaKnown RBP27.47■■□□□ 1.99
TSKU-201ENST00000333090 RABL6Q3YEC7 729 aaPredicted RBP27.47■■□□□ 1.99
TSKU-201ENST00000333090 CCDC150Q8NCX0 1101 aa27.47■■□□□ 1.99
TSKU-201ENST00000333090 HELLSQ9NRZ9 838 aa27.47■■□□□ 1.99
TSKU-201ENST00000333090 NLRP2Q9NX02 1062 aa27.47■■□□□ 1.99
TSKU-201ENST00000333090 CLIC4Q9Y696 253 aa27.47■■□□□ 1.99
TSKU-201ENST00000333090 LINC00301Q8NCQ3 95 aa27.46■■□□□ 1.99
TSKU-201ENST00000333090 ZNF274Q96GC6 653 aaPredicted RBP27.46■■□□□ 1.99
TSKU-201ENST00000333090 ST7Q9NRC1 585 aa27.46■■□□□ 1.99
TSKU-201ENST00000333090 ZNF446Q9NWS9 450 aa27.46■■□□□ 1.99
TSKU-201ENST00000333090 LAMA4Q16363 1823 aa27.46■■□□□ 1.99
TSKU-201ENST00000333090 TAF3Q5VWG9 929 aa27.46■■□□□ 1.99
TSKU-201ENST00000333090 A0A1W2PQ27 194 aa27.45■■□□□ 1.99
TSKU-201ENST00000333090 A0A1W2PQ64 194 aa27.45■■□□□ 1.99
TSKU-201ENST00000333090 A0A1W2PQD8 194 aa27.45■■□□□ 1.99
TSKU-201ENST00000333090 NFATC2IPQ8NCF5 419 aa27.45■■□□□ 1.99
TSKU-201ENST00000333090 LRRN4CLQ8ND94 238 aa27.45■■□□□ 1.99
TSKU-201ENST00000333090 L2HGDHQ9H9P8 463 aa27.45■■□□□ 1.99
TSKU-201ENST00000333090 ZNF496Q96IT1 587 aaPredicted RBP27.45■■□□□ 1.98
TSKU-201ENST00000333090 FAM53CQ9NYF3 392 aa27.45■■□□□ 1.98
TSKU-201ENST00000333090 CHRNA2Q15822 529 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms