RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 MAP3K11Q16584 847 aa26.36■■□□□ 1.81
PNKP-201ENST00000322344 NSUN7Q8NE18 718 aaKnown RBP26.36■■□□□ 1.81
PNKP-201ENST00000322344 ZNF274Q96GC6 653 aaPredicted RBP26.36■■□□□ 1.81
PNKP-201ENST00000322344 USP25Q9UHP3 1055 aa26.36■■□□□ 1.81
PNKP-201ENST00000322344 KDM4AO75164 1064 aa26.36■■□□□ 1.81
PNKP-201ENST00000322344 ADORA1P30542 326 aa26.36■■□□□ 1.81
PNKP-201ENST00000322344 OSBP2Q969R2 916 aa26.36■■□□□ 1.81
PNKP-201ENST00000322344 BTG4Q9NY30 223 aa26.36■■□□□ 1.81
PNKP-201ENST00000322344 CFAP45Q9UL16 551 aa26.36■■□□□ 1.81
PNKP-201ENST00000322344 APOBRQ0VD83 1088 aa26.34■■□□□ 1.81
PNKP-201ENST00000322344 NLRP10Q86W26 655 aa26.34■■□□□ 1.81
PNKP-201ENST00000322344 TFIP11Q9UBB9 837 aaKnown RBP26.34■■□□□ 1.81
PNKP-201ENST00000322344 BCL9O00512 1426 aa26.34■■□□□ 1.81
PNKP-201ENST00000322344 TPM2P07951 284 aa26.34■■□□□ 1.81
PNKP-201ENST00000322344 LIG1P18858 919 aa26.34■■□□□ 1.81
PNKP-201ENST00000322344 TERF1P54274 439 aa26.34■■□□□ 1.81
PNKP-201ENST00000322344 DDX11Q96FC9 970 aa26.34■■□□□ 1.81
PNKP-201ENST00000322344 ADCY5O95622 1261 aa26.33■■□□□ 1.81
PNKP-201ENST00000322344 ATP2B3Q16720 1220 aa26.33■■□□□ 1.81
PNKP-201ENST00000322344 RIC1Q4ADV7 1423 aa26.33■■□□□ 1.81
PNKP-201ENST00000322344 APPBP2Q92624 585 aa26.33■■□□□ 1.81
PNKP-201ENST00000322344 RIPOR2Q9Y4F9 1068 aa26.33■■□□□ 1.81
PNKP-201ENST00000322344 ITGB4P16144 1822 aa26.33■■□□□ 1.81
PNKP-201ENST00000322344 PTPDC1A2A3K4 754 aa26.32■■□□□ 1.8
PNKP-201ENST00000322344 IMMTQ16891 758 aaKnown RBP26.32■■□□□ 1.8
PNKP-201ENST00000322344 WASHC4Q2M389 1173 aa26.32■■□□□ 1.8
PNKP-201ENST00000322344 COL14A1Q05707 1796 aaKnown RBP26.32■■□□□ 1.8
PNKP-201ENST00000322344 CYP19A1P11511 503 aaPredicted RBP26.32■■□□□ 1.8
PNKP-201ENST00000322344 METTL24Q5JXM2 366 aa26.32■■□□□ 1.8
PNKP-201ENST00000322344 TTLL11Q8NHH1 800 aa26.32■■□□□ 1.8
PNKP-201ENST00000322344 ZNF512BQ96KM6 892 aaPredicted RBP26.32■■□□□ 1.8
PNKP-201ENST00000322344 ANKRD18BA2A2Z9 1011 aa26.31■■□□□ 1.8
PNKP-201ENST00000322344 EVCP57679 992 aa26.31■■□□□ 1.8
PNKP-201ENST00000322344 ATL3Q6DD88 541 aa26.31■■□□□ 1.8
PNKP-201ENST00000322344 TNMDQ9H2S6 317 aa26.31■■□□□ 1.8
PNKP-201ENST00000322344 CTDNEP1O95476 244 aa26.31■■□□□ 1.8
PNKP-201ENST00000322344 CTSWP56202 376 aa26.31■■□□□ 1.8
PNKP-201ENST00000322344 HLFQ16534 295 aa26.31■■□□□ 1.8
PNKP-201ENST00000322344 ZSCAN25Q6NSZ9 544 aa26.31■■□□□ 1.8
PNKP-201ENST00000322344 CCDC85AQ96PX6 553 aaPredicted RBP26.31■■□□□ 1.8
PNKP-201ENST00000322344 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.31■■□□□ 1.82e-7■■■■■ 30.6
PNKP-201ENST00000322344 CLSTN2Q9H4D0 955 aa26.31■■□□□ 1.8
PNKP-201ENST00000322344 DACT1Q9NYF0 836 aa26.31■■□□□ 1.8
PNKP-201ENST00000322344 SALL1Q9NSC2 1324 aa26.3■■□□□ 1.8
PNKP-201ENST00000322344 ITGA6P23229 1130 aa26.3■■□□□ 1.8
PNKP-201ENST00000322344 PDIA3P30101 505 aaKnown RBP26.3■■□□□ 1.8
PNKP-201ENST00000322344 ZAP70P43403 619 aa26.3■■□□□ 1.8
PNKP-201ENST00000322344 LDHAL6AQ6ZMR3 332 aa26.3■■□□□ 1.8
PNKP-201ENST00000322344 RBM43Q6ZSC3 357 aaKnown RBP26.3■■□□□ 1.8
PNKP-201ENST00000322344 ERVV-1B6SEH8 477 aa26.29■■□□□ 1.8
PNKP-201ENST00000322344 FAM200AQ8TCP9 573 aa26.29■■□□□ 1.8
PNKP-201ENST00000322344 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.29■■□□□ 1.8
PNKP-201ENST00000322344 ANKRD36CQ5JPF3 1778 aa26.29■■□□□ 1.8
PNKP-201ENST00000322344 PLCH1Q4KWH8 1693 aa26.29■■□□□ 1.8
PNKP-201ENST00000322344 A0A0G2JLW4 131 aa26.29■■□□□ 1.8
PNKP-201ENST00000322344 SCARF1Q14162 830 aa26.29■■□□□ 1.8
PNKP-201ENST00000322344 GPTP24298 496 aa26.28■■□□□ 1.8
PNKP-201ENST00000322344 TTLL5Q6EMB2 1281 aa26.28■■□□□ 1.8
PNKP-201ENST00000322344 BICD2Q8TD16 824 aa26.28■■□□□ 1.8
PNKP-201ENST00000322344 GREM2Q9H772 168 aa26.28■■□□□ 1.8
PNKP-201ENST00000322344 TYRO3Q06418 890 aa26.27■■□□□ 1.8
PNKP-201ENST00000322344 KIAA2012Q0VF49 1180 aa26.27■■□□□ 1.8
PNKP-201ENST00000322344 TTF1Q15361 905 aaPredicted RBP26.27■■□□□ 1.8
PNKP-201ENST00000322344 PGBD1Q96JS3 809 aa26.27■■□□□ 1.8
PNKP-201ENST00000322344 IRS4O14654 1257 aaPredicted RBP26.27■■□□□ 1.8
PNKP-201ENST00000322344 CNNM1Q9NRU3 951 aa26.27■■□□□ 1.8
PNKP-201ENST00000322344 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.27■■□□□ 1.8
PNKP-201ENST00000322344 WDR19Q8NEZ3 1342 aa26.26■■□□□ 1.8
PNKP-201ENST00000322344 FOXP2O15409 715 aa26.26■■□□□ 1.79
PNKP-201ENST00000322344 PDE8AO60658 829 aa26.26■■□□□ 1.79
PNKP-201ENST00000322344 IL6STP40189 918 aaPredicted RBP26.26■■□□□ 1.79
PNKP-201ENST00000322344 CCT2P78371 535 aaKnown RBP26.26■■□□□ 1.79
PNKP-201ENST00000322344 ZNF396Q96N95 335 aaPredicted RBP26.26■■□□□ 1.79
PNKP-201ENST00000322344 SLC4A9Q96Q91 983 aa26.26■■□□□ 1.79
PNKP-201ENST00000322344 EXOC5O00471 708 aa26.26■■□□□ 1.79
PNKP-201ENST00000322344 FGAP02671 866 aa26.26■■□□□ 1.79
PNKP-201ENST00000322344 TRMT112Q9UI30 125 aaKnown RBP26.26■■□□□ 1.79
PNKP-201ENST00000322344 RCOR1Q9UKL0 485 aa26.26■■□□□ 1.79
PNKP-201ENST00000322344 MRVI1Q9Y6F6 885 aa26.26■■□□□ 1.79
PNKP-201ENST00000322344 CAMK4Q16566 473 aa26.25■■□□□ 1.79
PNKP-201ENST00000322344 SYNE4Q8N205 404 aa26.25■■□□□ 1.79
PNKP-201ENST00000322344 ZBTB1Q9Y2K1 713 aa26.25■■□□□ 1.79
PNKP-201ENST00000322344 TPM3P06753 285 aa26.24■■□□□ 1.79
PNKP-201ENST00000322344 ADD1P35611 737 aaKnown RBP26.24■■□□□ 1.79
PNKP-201ENST00000322344 VGLL2Q8N8G2 317 aa26.24■■□□□ 1.79
PNKP-201ENST00000322344 NAP1L2Q9ULW6 460 aaPredicted RBP26.24■■□□□ 1.79
PNKP-201ENST00000322344 NWD2Q9ULI1 1742 aa26.24■■□□□ 1.79
PNKP-201ENST00000322344 GPAA1O43292 621 aa26.24■■□□□ 1.79
PNKP-201ENST00000322344 DHX16O60231 1041 aaKnown RBP26.24■■□□□ 1.79
PNKP-201ENST00000322344 MCAMP43121 646 aa26.24■■□□□ 1.79
PNKP-201ENST00000322344 MB21D2Q8IYB1 491 aaPredicted RBP26.24■■□□□ 1.79
PNKP-201ENST00000322344 NCOA7Q8NI08 942 aa26.24■■□□□ 1.79
PNKP-201ENST00000322344 AK7Q96M32 723 aa26.24■■□□□ 1.79
PNKP-201ENST00000322344 PUS7LQ9H0K6 701 aaKnown RBP26.24■■□□□ 1.79
PNKP-201ENST00000322344 ATRNO75882 1429 aa26.24■■□□□ 1.79
PNKP-201ENST00000322344 NCOA5Q9HCD5 579 aaKnown RBP26.23■■□□□ 1.79
PNKP-201ENST00000322344 ZNF213O14771 459 aa26.22■■□□□ 1.79
PNKP-201ENST00000322344 PDE8BO95263 885 aa26.22■■□□□ 1.79
PNKP-201ENST00000322344 ADD2P35612 726 aa26.22■■□□□ 1.79
PNKP-201ENST00000322344 CHST3Q7LGC8 479 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms