RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 CCDC93Q567U6 631 aa20.82■□□□□ 0.92
PRKCB-202ENST00000321728 UBXN4Q92575 508 aa20.82■□□□□ 0.92
PRKCB-202ENST00000321728 DNAJC2Q99543 621 aaKnown RBP20.82■□□□□ 0.92
PRKCB-202ENST00000321728 CTDNEP1O95476 244 aa20.81■□□□□ 0.92
PRKCB-202ENST00000321728 DNAI1Q9UI46 699 aa20.81■□□□□ 0.92
PRKCB-202ENST00000321728 PCDHA7Q9UN72 937 aa20.81■□□□□ 0.92
PRKCB-202ENST00000321728 ATL3Q6DD88 541 aa20.81■□□□□ 0.92
PRKCB-202ENST00000321728 TMCO3Q6UWJ1 677 aa20.81■□□□□ 0.92
PRKCB-202ENST00000321728 FMR1NBQ8N0W7 255 aaPredicted RBP20.81■□□□□ 0.92
PRKCB-202ENST00000321728 TRERF1Q96PN7 1200 aa20.81■□□□□ 0.92
PRKCB-202ENST00000321728 NCOA5Q9HCD5 579 aaKnown RBP20.81■□□□□ 0.92
PRKCB-202ENST00000321728 ARGLU1Q9NWB6 273 aaPredicted RBP20.81■□□□□ 0.92
PRKCB-202ENST00000321728 BIN1O00499 593 aa20.81■□□□□ 0.92
PRKCB-202ENST00000321728 PIP4K2AP48426 406 aaPredicted RBP20.81■□□□□ 0.92
PRKCB-202ENST00000321728 SF3A1Q15459 793 aaKnown RBP20.81■□□□□ 0.92
PRKCB-202ENST00000321728 TPM4P67936 248 aa20.8■□□□□ 0.92
PRKCB-202ENST00000321728 KIAA1468Q9P260 1216 aa20.8■□□□□ 0.92
PRKCB-202ENST00000321728 POLR3GO15318 223 aaPredicted RBP20.8■□□□□ 0.92
PRKCB-202ENST00000321728 PLA2G4AP47712 749 aa20.8■□□□□ 0.92
PRKCB-202ENST00000321728 NDUFA8P51970 172 aa20.8■□□□□ 0.92
PRKCB-202ENST00000321728 STOX1Q6ZVD7 989 aa20.8■□□□□ 0.92
PRKCB-202ENST00000321728 MNS1Q8NEH6 495 aa20.8■□□□□ 0.92
PRKCB-202ENST00000321728 DHX32Q7L7V1 743 aaKnown RBP20.79■□□□□ 0.92
PRKCB-202ENST00000321728 HNRNPH2P55795 449 aaKnown RBP20.79■□□□□ 0.92
PRKCB-202ENST00000321728 ETF1P62495 437 aaKnown RBP20.79■□□□□ 0.92
PRKCB-202ENST00000321728 MCMDC2Q4G0Z9 681 aa20.79■□□□□ 0.92
PRKCB-202ENST00000321728 ILDR1Q86SU0 546 aaPredicted RBP20.78■□□□□ 0.92
PRKCB-202ENST00000321728 DBNLQ9UJU6 430 aaKnown RBP20.78■□□□□ 0.92
PRKCB-202ENST00000321728 ZNF609O15014 1411 aa20.78■□□□□ 0.92
PRKCB-202ENST00000321728 DDX58O95786 925 aaKnown RBP20.78■□□□□ 0.92
PRKCB-202ENST00000321728 TUBB4AP04350 444 aa20.78■□□□□ 0.92
PRKCB-202ENST00000321728 HMGB1P09429 215 aaKnown RBP20.78■□□□□ 0.92
PRKCB-202ENST00000321728 ATP5JP18859 108 aa20.78■□□□□ 0.92
PRKCB-202ENST00000321728 TEX35Q5T0J7 233 aa20.78■□□□□ 0.92
PRKCB-202ENST00000321728 ADALQ6DHV7 355 aa20.78■□□□□ 0.92
PRKCB-202ENST00000321728 ORC3Q9UBD5 711 aaPredicted RBP20.77■□□□□ 0.92
PRKCB-202ENST00000321728 MYH15Q9Y2K3 1946 aa20.77■□□□□ 0.92
PRKCB-202ENST00000321728 URI1O94763 535 aaPredicted RBP20.77■□□□□ 0.92
PRKCB-202ENST00000321728 STK38Q15208 465 aa20.77■□□□□ 0.92
PRKCB-202ENST00000321728 DDX46Q7L014 1031 aaKnown RBP20.77■□□□□ 0.92
PRKCB-202ENST00000321728 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.77■□□□□ 0.92
PRKCB-202ENST00000321728 KDM3BQ7LBC6 1761 aa20.76■□□□□ 0.91
PRKCB-202ENST00000321728 LMOD1P29536 600 aaPredicted RBP20.76■□□□□ 0.91
PRKCB-202ENST00000321728 KCNJ6P48051 423 aa20.76■□□□□ 0.91
PRKCB-202ENST00000321728 UTYO14607 1347 aa20.76■□□□□ 0.91
PRKCB-202ENST00000321728 SLC3A2P08195 630 aaKnown RBP20.76■□□□□ 0.91
PRKCB-202ENST00000321728 RIC3Q7Z5B4 369 aa20.76■□□□□ 0.91
PRKCB-202ENST00000321728 CCP110O43303 1012 aa20.75■□□□□ 0.91
PRKCB-202ENST00000321728 ZRANB2O95218 330 aaKnown RBP eCLIP20.75■□□□□ 0.91
PRKCB-202ENST00000321728 MYL6BP14649 208 aa20.75■□□□□ 0.91
PRKCB-202ENST00000321728 MAPK8IP2Q13387 824 aaPredicted RBP20.75■□□□□ 0.91
PRKCB-202ENST00000321728 DHX8Q14562 1220 aaKnown RBP20.75■□□□□ 0.91
PRKCB-202ENST00000321728 AKAP4Q5JQC9 854 aa20.75■□□□□ 0.91
PRKCB-202ENST00000321728 BPIFA3Q9BQP9 254 aa20.75■□□□□ 0.91
PRKCB-202ENST00000321728 PHLPP2Q6ZVD8 1323 aa20.75■□□□□ 0.91
PRKCB-202ENST00000321728 SLC39A6Q13433 755 aa20.75■□□□□ 0.91
PRKCB-202ENST00000321728 ESCO1Q5FWF5 840 aa20.75■□□□□ 0.91
PRKCB-202ENST00000321728 ISM2Q6H9L7 571 aa20.75■□□□□ 0.91
PRKCB-202ENST00000321728 CHST3Q7LGC8 479 aa20.75■□□□□ 0.91
PRKCB-202ENST00000321728 RTEL1Q9NZ71 1219 aa20.75■□□□□ 0.91
PRKCB-202ENST00000321728 TBX22Q9Y458 520 aa20.75■□□□□ 0.91
PRKCB-202ENST00000321728 MED1Q15648 1581 aaPredicted RBP20.75■□□□□ 0.91
PRKCB-202ENST00000321728 RGPD2P0DJD1 1756 aa20.74■□□□□ 0.91
PRKCB-202ENST00000321728 SEC31AO94979 1220 aaKnown RBP20.74■□□□□ 0.91
PRKCB-202ENST00000321728 CAPN2P17655 700 aa20.74■□□□□ 0.91
PRKCB-202ENST00000321728 TFCP2Q12800 502 aa20.74■□□□□ 0.91
PRKCB-202ENST00000321728 TNNI3KQ59H18 835 aa20.74■□□□□ 0.91
PRKCB-202ENST00000321728 PHF8Q9UPP1 1060 aa20.74■□□□□ 0.91
PRKCB-202ENST00000321728 FPGT-TNNI3KV9GXZ4 949 aa20.74■□□□□ 0.91
PRKCB-202ENST00000321728 A0A1W2PQ27 194 aa20.74■□□□□ 0.91
PRKCB-202ENST00000321728 A0A1W2PQ64 194 aa20.74■□□□□ 0.91
PRKCB-202ENST00000321728 A0A1W2PQD8 194 aa20.74■□□□□ 0.91
PRKCB-202ENST00000321728 TULP2O00295 520 aa20.74■□□□□ 0.91
PRKCB-202ENST00000321728 POLR3DP05423 398 aaPredicted RBP20.74■□□□□ 0.91
PRKCB-202ENST00000321728 EPHA10Q5JZY3 1008 aa20.74■□□□□ 0.91
PRKCB-202ENST00000321728 CARD6Q9BX69 1037 aa20.74■□□□□ 0.91
PRKCB-202ENST00000321728 CLIC4Q9Y696 253 aa20.74■□□□□ 0.91
PRKCB-202ENST00000321728 IGKV5-2P06315 115 aa20.73■□□□□ 0.91
PRKCB-202ENST00000321728 FANCCQ00597 558 aa20.73■□□□□ 0.91
PRKCB-202ENST00000321728 OTUD7BQ6GQQ9 843 aa20.73■□□□□ 0.91
PRKCB-202ENST00000321728 NEK11Q8NG66 645 aa20.73■□□□□ 0.91
PRKCB-202ENST00000321728 MARF1Q9Y4F3 1742 aaKnown RBP20.73■□□□□ 0.91
PRKCB-202ENST00000321728 PXDNQ92626 1479 aa20.73■□□□□ 0.91
PRKCB-202ENST00000321728 NLRP12P59046 1061 aa20.73■□□□□ 0.91
PRKCB-202ENST00000321728 PSME1Q06323 249 aa20.73■□□□□ 0.91
PRKCB-202ENST00000321728 LINC00301Q8NCQ3 95 aa20.73■□□□□ 0.91
PRKCB-202ENST00000321728 IP6K1Q92551 441 aa20.73■□□□□ 0.91
PRKCB-202ENST00000321728 CARMIL3Q8ND23 1372 aa20.73■□□□□ 0.91
PRKCB-202ENST00000321728 NEXNQ0ZGT2 675 aa20.72■□□□□ 0.91
PRKCB-202ENST00000321728 FAM177A1Q8N128 213 aaPredicted RBP20.72■□□□□ 0.91
PRKCB-202ENST00000321728 NCAPD2Q15021 1401 aa20.72■□□□□ 0.91
PRKCB-202ENST00000321728 ATP1A3P13637 1013 aa20.72■□□□□ 0.91
PRKCB-202ENST00000321728 PDIA3P30101 505 aaKnown RBP20.72■□□□□ 0.91
PRKCB-202ENST00000321728 NCAPHQ15003 741 aa20.72■□□□□ 0.91
PRKCB-202ENST00000321728 PLEKHO1Q53GL0 409 aaPredicted RBP20.72■□□□□ 0.91
PRKCB-202ENST00000321728 C1orf141Q5JVX7 400 aa20.72■□□□□ 0.91
PRKCB-202ENST00000321728 DBNDD2Q9BQY9 259 aa20.72■□□□□ 0.91
PRKCB-202ENST00000321728 SRRTQ9BXP5 876 aaKnown RBP20.72■□□□□ 0.91
PRKCB-202ENST00000321728 SALL1Q9NSC2 1324 aa20.72■□□□□ 0.91
PRKCB-202ENST00000321728 RNMTO43148 476 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms