RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 ANGEL2Q5VTE6 544 aaKnown RBP22.35■■□□□ 1.17
EXOSC4-201ENST00000316052 TXNRD3Q86VQ6 643 aa22.35■■□□□ 1.17
EXOSC4-201ENST00000316052 CDCA5Q96FF9 252 aa22.35■■□□□ 1.17
EXOSC4-201ENST00000316052 MXD3Q9BW11 206 aa22.35■■□□□ 1.17
EXOSC4-201ENST00000316052 PLA2G12BQ9BX93 195 aa22.35■■□□□ 1.17
EXOSC4-201ENST00000316052 MED23Q9ULK4 1368 aa22.35■■□□□ 1.17
EXOSC4-201ENST00000316052 VAMP4O75379 141 aa22.34■■□□□ 1.17
EXOSC4-201ENST00000316052 DNAAF4Q8WXU2 420 aa22.34■■□□□ 1.17
EXOSC4-201ENST00000316052 MYOZ2Q9NPC6 264 aa22.34■■□□□ 1.17
EXOSC4-201ENST00000316052 CSF1RP07333 972 aa22.33■■□□□ 1.17
EXOSC4-201ENST00000316052 ZNF157P51786 506 aaPredicted RBP22.33■■□□□ 1.17
EXOSC4-201ENST00000316052 FKBP5Q13451 457 aaPredicted RBP22.33■■□□□ 1.17
EXOSC4-201ENST00000316052 DACT2Q5SW24 774 aa22.33■■□□□ 1.17
EXOSC4-201ENST00000316052 SCAF8Q9UPN6 1271 aaKnown RBP22.33■■□□□ 1.17
EXOSC4-201ENST00000316052 ITGA6P23229 1130 aa22.32■■□□□ 1.16
EXOSC4-201ENST00000316052 KIF23Q02241 960 aaPredicted RBP22.32■■□□□ 1.16
EXOSC4-201ENST00000316052 FAM161AQ3B820 660 aa22.32■■□□□ 1.16
EXOSC4-201ENST00000316052 WDR63Q8IWG1 891 aa22.32■■□□□ 1.16
EXOSC4-201ENST00000316052 CCDC102AQ96A19 550 aa22.32■■□□□ 1.16
EXOSC4-201ENST00000316052 ZNF646O15015 1829 aaPredicted RBP22.31■■□□□ 1.16
EXOSC4-201ENST00000316052 KLRK1P26718 216 aa22.31■■□□□ 1.16
EXOSC4-201ENST00000316052 IGHMBP2P38935 993 aaKnown RBP22.31■■□□□ 1.16
EXOSC4-201ENST00000316052 EXOSC9Q06265 439 aaKnown RBP22.31■■□□□ 1.16
EXOSC4-201ENST00000316052 LINS1Q8NG48 757 aa22.31■■□□□ 1.16
EXOSC4-201ENST00000316052 LEMD3Q9Y2U8 911 aa22.31■■□□□ 1.16
EXOSC4-201ENST00000316052 NBPF9Q3BBW0 867 aa22.3■■□□□ 1.16
EXOSC4-201ENST00000316052 COA1Q9GZY4 146 aa22.3■■□□□ 1.16
EXOSC4-201ENST00000316052 MYH16Q9H6N6 1097 aa22.3■■□□□ 1.16
EXOSC4-201ENST00000316052 SPINK5Q9NQ38 1064 aaPredicted RBP22.3■■□□□ 1.16
EXOSC4-201ENST00000316052 ZNF804BA4D1E1 1349 aa22.29■■□□□ 1.16
EXOSC4-201ENST00000316052 PITPNM2Q9BZ72 1349 aa22.29■■□□□ 1.16
EXOSC4-201ENST00000316052 CCDC85CA6NKD9 419 aa22.28■■□□□ 1.16
EXOSC4-201ENST00000316052 SLC10A3P09131 477 aa22.28■■□□□ 1.16
EXOSC4-201ENST00000316052 STRIP1Q5VSL9 837 aa22.28■■□□□ 1.16
EXOSC4-201ENST00000316052 PRAMEF18Q5VWM3 479 aa22.28■■□□□ 1.16
EXOSC4-201ENST00000316052 FBXW7Q969H0 707 aa22.28■■□□□ 1.16
EXOSC4-201ENST00000316052 MPHOSPH8Q99549 860 aa22.28■■□□□ 1.16
EXOSC4-201ENST00000316052 MCOLN1Q9GZU1 580 aa22.28■■□□□ 1.16
EXOSC4-201ENST00000316052 ANKRD2Q9GZV1 360 aa22.28■■□□□ 1.16
EXOSC4-201ENST00000316052 F6X3S4 739 aa22.27■■□□□ 1.16
EXOSC4-201ENST00000316052 ANP32CO43423 234 aa22.27■■□□□ 1.16
EXOSC4-201ENST00000316052 MOB2Q70IA6 237 aa22.27■■□□□ 1.16
EXOSC4-201ENST00000316052 CSRNP1Q96S65 589 aa22.27■■□□□ 1.16
EXOSC4-201ENST00000316052 AKAP11Q9UKA4 1901 aa22.26■■□□□ 1.15
EXOSC4-201ENST00000316052 SNAP23O00161 211 aa22.26■■□□□ 1.15
EXOSC4-201ENST00000316052 FOXO4P98177 505 aa22.26■■□□□ 1.15
EXOSC4-201ENST00000316052 CHRNDQ07001 517 aa22.26■■□□□ 1.15
EXOSC4-201ENST00000316052 TTLL5Q6EMB2 1281 aa22.26■■□□□ 1.15
EXOSC4-201ENST00000316052 WNT10BO00744 389 aa22.25■■□□□ 1.15
EXOSC4-201ENST00000316052 BEND3Q5T5X7 828 aa22.25■■□□□ 1.15
EXOSC4-201ENST00000316052 OGFOD1Q8N543 542 aa22.25■■□□□ 1.15
EXOSC4-201ENST00000316052 RNF186Q9NXI6 227 aa22.25■■□□□ 1.15
EXOSC4-201ENST00000316052 ANKRD18BA2A2Z9 1011 aa22.24■■□□□ 1.15
EXOSC4-201ENST00000316052 TRPA1O75762 1119 aa22.24■■□□□ 1.15
EXOSC4-201ENST00000316052 RASAL3Q86YV0 1011 aa22.24■■□□□ 1.15
EXOSC4-201ENST00000316052 MYO3BQ8WXR4 1341 aa22.24■■□□□ 1.15
EXOSC4-201ENST00000316052 ZNF316A6NFI3 1004 aaPredicted RBP22.23■■□□□ 1.15
EXOSC4-201ENST00000316052 UBE2Q2LH0YL09 131 aa22.23■■□□□ 1.15
EXOSC4-201ENST00000316052 TAF5LO75529 589 aa22.23■■□□□ 1.15
EXOSC4-201ENST00000316052 FKBP1BP68106 108 aa22.23■■□□□ 1.15
EXOSC4-201ENST00000316052 GTF2IP78347 998 aa22.23■■□□□ 1.15
EXOSC4-201ENST00000316052 DGKZQ13574 1117 aa22.23■■□□□ 1.15
EXOSC4-201ENST00000316052 HELBQ8NG08 1087 aaPredicted RBP22.23■■□□□ 1.15
EXOSC4-201ENST00000316052 SAGE1Q9NXZ1 904 aa22.23■■□□□ 1.15
EXOSC4-201ENST00000316052 IRS2Q9Y4H2 1338 aa22.23■■□□□ 1.15
EXOSC4-201ENST00000316052 PAPPA2Q9BXP8 1791 aa22.22■■□□□ 1.15
EXOSC4-201ENST00000316052 SASH1O94885 1247 aa22.22■■□□□ 1.15
EXOSC4-201ENST00000316052 KCNJ4P48050 445 aa22.22■■□□□ 1.15
EXOSC4-201ENST00000316052 EPHA10Q5JZY3 1008 aa22.22■■□□□ 1.15
EXOSC4-201ENST00000316052 KIAA0825Q8IV33 1275 aa22.22■■□□□ 1.15
EXOSC4-201ENST00000316052 CD209Q9NNX6 404 aa22.22■■□□□ 1.15
EXOSC4-201ENST00000316052 IFIT5Q13325 482 aaKnown RBP22.21■■□□□ 1.15
EXOSC4-201ENST00000316052 LMBR1LQ6UX01 489 aa22.2■■□□□ 1.14
EXOSC4-201ENST00000316052 ZBED3Q96IU2 234 aaPredicted RBP22.2■■□□□ 1.14
EXOSC4-201ENST00000316052 CHMP3Q9Y3E7 222 aa22.2■■□□□ 1.14
EXOSC4-201ENST00000316052 ZEB1P37275 1124 aaPredicted RBP22.19■■□□□ 1.14
EXOSC4-201ENST00000316052 RGS19P49795 217 aa22.19■■□□□ 1.14
EXOSC4-201ENST00000316052 MMP14P50281 582 aa22.19■■□□□ 1.14
EXOSC4-201ENST00000316052 C15orf52Q6ZUT6 534 aaKnown RBP22.19■■□□□ 1.14
EXOSC4-201ENST00000316052 FAM9BQ8IZU0 186 aa22.19■■□□□ 1.14
EXOSC4-201ENST00000316052 CERS5Q8N5B7 392 aa22.19■■□□□ 1.14
EXOSC4-201ENST00000316052 ZNF594Q96JF6 807 aaPredicted RBP22.19■■□□□ 1.14
EXOSC4-201ENST00000316052 A0A1B0GUL6 1792 aa22.17■■□□□ 1.14
EXOSC4-201ENST00000316052 GRM8O00222 908 aa22.17■■□□□ 1.14
EXOSC4-201ENST00000316052 TTLL12Q14166 644 aaPredicted RBP22.17■■□□□ 1.14
EXOSC4-201ENST00000316052 REM2Q8IYK8 340 aaPredicted RBP22.17■■□□□ 1.14
EXOSC4-201ENST00000316052 HDAC9Q9UKV0 1011 aa22.17■■□□□ 1.14
EXOSC4-201ENST00000316052 TNRC18O15417 2968 aaPredicted RBP22.17■■□□□ 1.14
EXOSC4-201ENST00000316052 IL1R1P14778 569 aa22.15■■□□□ 1.14
EXOSC4-201ENST00000316052 PCDHAC2Q9Y5I4 1007 aa22.15■■□□□ 1.14
EXOSC4-201ENST00000316052 PLIN1O60240 522 aa22.14■■□□□ 1.13
EXOSC4-201ENST00000316052 PTPN12Q05209 780 aaKnown RBP22.14■■□□□ 1.13
EXOSC4-201ENST00000316052 PRKG1Q13976 671 aa22.14■■□□□ 1.13
EXOSC4-201ENST00000316052 CCDC57Q2TAC2 916 aa22.14■■□□□ 1.13
EXOSC4-201ENST00000316052 SLC4A10Q6U841 1118 aa22.14■■□□□ 1.13
EXOSC4-201ENST00000316052 LDHAL6AQ6ZMR3 332 aa22.14■■□□□ 1.13
EXOSC4-201ENST00000316052 APOBEC3FQ8IUX4 373 aaKnown RBP22.14■■□□□ 1.13
EXOSC4-201ENST00000316052 C9orf78Q9NZ63 289 aaPredicted RBP22.14■■□□□ 1.13
EXOSC4-201ENST00000316052 ALDH1L1O75891 902 aa22.13■■□□□ 1.13
EXOSC4-201ENST00000316052 NF2P35240 595 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms