RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 ZMYM1Q5SVZ6 1142 aa14.78□□□□□ -0.04
RNF4-201ENST00000314289 USPL1Q5W0Q7 1092 aa14.78□□□□□ -0.04
RNF4-201ENST00000314289 Q6ZUG5 572 aa14.78□□□□□ -0.04
RNF4-201ENST00000314289 CAMTA2O94983 1202 aa14.78□□□□□ -0.04
RNF4-201ENST00000314289 HSP90B1P14625 803 aaKnown RBP14.78□□□□□ -0.04
RNF4-201ENST00000314289 PHKA1P46020 1223 aa14.78□□□□□ -0.04
RNF4-201ENST00000314289 NASPP49321 788 aaPredicted RBP14.78□□□□□ -0.04
RNF4-201ENST00000314289 FAM173BQ6P4H8 233 aa14.78□□□□□ -0.04
RNF4-201ENST00000314289 CCDC24Q8N4L8 307 aa14.78□□□□□ -0.04
RNF4-201ENST00000314289 ZMYND15Q9H091 742 aa14.78□□□□□ -0.04
RNF4-201ENST00000314289 PUS7LQ9H0K6 701 aaKnown RBP14.78□□□□□ -0.04
RNF4-201ENST00000314289 ZSCAN23Q3MJ62 389 aa14.77□□□□□ -0.04
RNF4-201ENST00000314289 BRF1Q92994 677 aa14.77□□□□□ -0.04
RNF4-201ENST00000314289 TMEM63CQ9P1W3 806 aa14.77□□□□□ -0.04
RNF4-201ENST00000314289 U3KPZ7 1027 aaPredicted RBP14.77□□□□□ -0.04
RNF4-201ENST00000314289 SH3TC1Q8TE82 1336 aa14.77□□□□□ -0.04
RNF4-201ENST00000314289 ZSCAN22P10073 491 aaPredicted RBP14.77□□□□□ -0.05
RNF4-201ENST00000314289 PTMSP20962 102 aa14.77□□□□□ -0.05
RNF4-201ENST00000314289 FOSBP53539 338 aa14.77□□□□□ -0.05
RNF4-201ENST00000314289 USP48Q86UV5 1035 aa14.77□□□□□ -0.05
RNF4-201ENST00000314289 HMG20BQ9P0W2 317 aa14.77□□□□□ -0.05
RNF4-201ENST00000314289 NRAPQ86VF7 1730 aa14.77□□□□□ -0.05
RNF4-201ENST00000314289 WTIPA6NIX2 430 aaPredicted RBP14.77□□□□□ -0.05
RNF4-201ENST00000314289 FIBPO43427 364 aa14.77□□□□□ -0.05
RNF4-201ENST00000314289 IDH1O75874 414 aaKnown RBP14.77□□□□□ -0.05
RNF4-201ENST00000314289 LINC00116Q8NCU8 138 aa14.77□□□□□ -0.05
RNF4-201ENST00000314289 UTP14AQ9BVJ6 771 aaKnown RBP14.77□□□□□ -0.05
RNF4-201ENST00000314289 JAK2O60674 1132 aa14.76□□□□□ -0.05
RNF4-201ENST00000314289 PDE8BO95263 885 aa14.76□□□□□ -0.05
RNF4-201ENST00000314289 ANP32BQ92688 251 aaKnown RBP14.76□□□□□ -0.05
RNF4-201ENST00000314289 HELLSQ9NRZ9 838 aa14.76□□□□□ -0.05
RNF4-201ENST00000314289 JCADQ9P266 1359 aa14.76□□□□□ -0.05
RNF4-201ENST00000314289 WNK3Q9BYP7 1800 aa14.76□□□□□ -0.05
RNF4-201ENST00000314289 DDX11Q96FC9 970 aa14.76□□□□□ -0.05
RNF4-201ENST00000314289 ZSCAN31Q96LW9 406 aaPredicted RBP14.76□□□□□ -0.05
RNF4-201ENST00000314289 SH2B1Q9NRF2 756 aaPredicted RBP14.76□□□□□ -0.05
RNF4-201ENST00000314289 IQSEC3Q9UPP2 1182 aaPredicted RBP14.76□□□□□ -0.05
RNF4-201ENST00000314289 SYCE3A1L190 88 aa14.75□□□□□ -0.05
RNF4-201ENST00000314289 BARGINQ6ZT62 677 aa14.75□□□□□ -0.05
RNF4-201ENST00000314289 VGLL2Q8N8G2 317 aa14.75□□□□□ -0.05
RNF4-201ENST00000314289 MPHOSPH8Q99549 860 aa14.75□□□□□ -0.05
RNF4-201ENST00000314289 DNM1Q05193 864 aaKnown RBP14.75□□□□□ -0.05
RNF4-201ENST00000314289 LARP1BQ659C4 914 aaKnown RBP14.75□□□□□ -0.05
RNF4-201ENST00000314289 CCDC102BQ68D86 513 aa14.75□□□□□ -0.05
RNF4-201ENST00000314289 GPHNQ9NQX3 736 aaPredicted RBP14.75□□□□□ -0.05
RNF4-201ENST00000314289 F13A1P00488 732 aa14.74□□□□□ -0.05
RNF4-201ENST00000314289 MTMR6Q9Y217 621 aa14.74□□□□□ -0.05
RNF4-201ENST00000314289 SLC9C2Q5TAH2 1124 aa14.74□□□□□ -0.05
RNF4-201ENST00000314289 C3orf67Q6ZVT6 689 aa14.74□□□□□ -0.05
RNF4-201ENST00000314289 CDC37L1Q7L3B6 337 aa14.74□□□□□ -0.05
RNF4-201ENST00000314289 PIH1D3Q9NQM4 214 aaKnown RBP14.74□□□□□ -0.05
RNF4-201ENST00000314289 FOXP2O15409 715 aa14.74□□□□□ -0.05
RNF4-201ENST00000314289 CCT2P78371 535 aaKnown RBP14.74□□□□□ -0.05
RNF4-201ENST00000314289 APOBRQ0VD83 1088 aa14.74□□□□□ -0.05
RNF4-201ENST00000314289 CCDC173Q0VFZ6 552 aa14.74□□□□□ -0.05
RNF4-201ENST00000314289 RAB11FIP4Q86YS3 637 aa14.74□□□□□ -0.05
RNF4-201ENST00000314289 E7EWF7 191 aa14.73□□□□□ -0.05
RNF4-201ENST00000314289 KRT32Q14532 448 aa14.73□□□□□ -0.05
RNF4-201ENST00000314289 TSGA10IPQ3SY00 556 aa14.73□□□□□ -0.05
RNF4-201ENST00000314289 TAOK2Q9UL54 1235 aa14.73□□□□□ -0.05
RNF4-201ENST00000314289 NCOA5Q9HCD5 579 aaKnown RBP14.73□□□□□ -0.05
RNF4-201ENST00000314289 USP21Q9UK80 565 aa14.73□□□□□ -0.05
RNF4-201ENST00000314289 FBXO3Q9UK99 471 aa14.73□□□□□ -0.05
RNF4-201ENST00000314289 DENND2AQ9ULE3 1009 aa14.73□□□□□ -0.05
RNF4-201ENST00000314289 MYH3P11055 1940 aa14.73□□□□□ -0.05
RNF4-201ENST00000314289 SRP68Q9UHB9 627 aaKnown RBP14.72□□□□□ -0.05
RNF4-201ENST00000314289 BCL9LQ86UU0 1499 aa14.72□□□□□ -0.05
RNF4-201ENST00000314289 RFX7Q2KHR2 1363 aa14.72□□□□□ -0.05
RNF4-201ENST00000314289 NTSR2O95665 410 aa14.72□□□□□ -0.05
RNF4-201ENST00000314289 FGAP02671 866 aa14.72□□□□□ -0.05
RNF4-201ENST00000314289 MSNP26038 577 aaKnown RBP14.72□□□□□ -0.05
RNF4-201ENST00000314289 ANKRD1Q15327 319 aa14.72□□□□□ -0.05
RNF4-201ENST00000314289 ERFEQ4G0M1 354 aa14.72□□□□□ -0.05
RNF4-201ENST00000314289 DSCC1Q9BVC3 393 aa14.72□□□□□ -0.05
RNF4-201ENST00000314289 WWC3Q9ULE0 1092 aa14.72□□□□□ -0.05
RNF4-201ENST00000314289 ANKRD36CQ5JPF3 1778 aa14.72□□□□□ -0.05
RNF4-201ENST00000314289 GPAA1O43292 621 aa14.72□□□□□ -0.05
RNF4-201ENST00000314289 APPP05067 770 aa14.72□□□□□ -0.05
RNF4-201ENST00000314289 BCAMP50895 628 aa14.72□□□□□ -0.05
RNF4-201ENST00000314289 AMIGO3Q86WK7 504 aa14.72□□□□□ -0.05
RNF4-201ENST00000314289 MYO5AQ9Y4I1 1855 aaKnown RBP14.72□□□□□ -0.05
RNF4-201ENST00000314289 TPM2P07951 284 aa14.71□□□□□ -0.06
RNF4-201ENST00000314289 GTF2E1P29083 439 aaPredicted RBP14.71□□□□□ -0.06
RNF4-201ENST00000314289 SCRN1Q12765 414 aa14.71□□□□□ -0.06
RNF4-201ENST00000314289 PUM3Q15397 648 aaKnown RBP14.71□□□□□ -0.06
RNF4-201ENST00000314289 DHX32Q7L7V1 743 aaKnown RBP14.7□□□□□ -0.06
RNF4-201ENST00000314289 ZSCAN30Q86W11 494 aa14.7□□□□□ -0.06
RNF4-201ENST00000314289 STK11IPQ8N1F8 1099 aa14.7□□□□□ -0.06
RNF4-201ENST00000314289 RNF214Q8ND24 703 aa14.7□□□□□ -0.06
RNF4-201ENST00000314289 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.7□□□□□ -0.06
RNF4-201ENST00000314289 RASGRF1Q13972 1273 aa14.7□□□□□ -0.06
RNF4-201ENST00000314289 VPS72Q15906 364 aa14.7□□□□□ -0.06
RNF4-201ENST00000314289 NKX2-3Q8TAU0 364 aa14.7□□□□□ -0.06
RNF4-201ENST00000314289 APPBP2Q92624 585 aa14.7□□□□□ -0.06
RNF4-201ENST00000314289 SMARCC1Q92922 1105 aaPredicted RBP14.7□□□□□ -0.06
RNF4-201ENST00000314289 TAF1P21675 1872 aa14.7□□□□□ -0.06
RNF4-201ENST00000314289 ZNF532Q9HCE3 1301 aa14.69□□□□□ -0.06
RNF4-201ENST00000314289 CCDC152Q4G0S7 254 aa14.69□□□□□ -0.06
RNF4-201ENST00000314289 LPIN2Q92539 896 aa14.69□□□□□ -0.06
RNF4-201ENST00000314289 GTF3C6Q969F1 213 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms