RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 YY1P25490 414 aa11.27□□□□□ -0.61
PDE4D-201ENST00000309641 TIMM10P62072 90 aa11.27□□□□□ -0.61
PDE4D-201ENST00000309641 UBE4AQ14139 1066 aa11.27□□□□□ -0.61
PDE4D-201ENST00000309641 NIM1KQ8IY84 436 aa11.27□□□□□ -0.61
PDE4D-201ENST00000309641 ZNF526Q8TF50 670 aaPredicted RBP11.27□□□□□ -0.61
PDE4D-201ENST00000309641 EYA3Q99504 573 aa11.27□□□□□ -0.61
PDE4D-201ENST00000309641 DDNO94850 711 aaPredicted RBP11.26□□□□□ -0.61
PDE4D-201ENST00000309641 ADORA1P30542 326 aa11.26□□□□□ -0.61
PDE4D-201ENST00000309641 CXCL9Q07325 125 aa11.26□□□□□ -0.61
PDE4D-201ENST00000309641 OS9Q13438 667 aaPredicted RBP11.26□□□□□ -0.61
PDE4D-201ENST00000309641 FAM84BQ96KN1 310 aaPredicted RBP11.26□□□□□ -0.61
PDE4D-201ENST00000309641 HMMRO75330 724 aa11.26□□□□□ -0.61
PDE4D-201ENST00000309641 BCAMP50895 628 aa11.26□□□□□ -0.61
PDE4D-201ENST00000309641 PUM3Q15397 648 aaKnown RBP11.26□□□□□ -0.61
PDE4D-201ENST00000309641 ATP2B3Q16720 1220 aa11.26□□□□□ -0.61
PDE4D-201ENST00000309641 BCL11AQ9H165 835 aa11.26□□□□□ -0.61
PDE4D-201ENST00000309641 VPS33BQ9H267 617 aa11.26□□□□□ -0.61
PDE4D-201ENST00000309641 ZNRF3Q9ULT6 936 aa11.26□□□□□ -0.61
PDE4D-201ENST00000309641 C15orf52Q6ZUT6 534 aaKnown RBP11.25□□□□□ -0.61
PDE4D-201ENST00000309641 CD209Q9NNX6 404 aa11.25□□□□□ -0.61
PDE4D-201ENST00000309641 IL1RAPL2Q9NP60 686 aa11.25□□□□□ -0.61
PDE4D-201ENST00000309641 IQSEC3Q9UPP2 1182 aaPredicted RBP11.25□□□□□ -0.61
PDE4D-201ENST00000309641 A0A1B0GUL7 405 aa11.25□□□□□ -0.61
PDE4D-201ENST00000309641 LPIN2Q92539 896 aa11.25□□□□□ -0.61
PDE4D-201ENST00000309641 MXD3Q9BW11 206 aa11.25□□□□□ -0.61
PDE4D-201ENST00000309641 JAG2Q9Y219 1238 aa11.25□□□□□ -0.61
PDE4D-201ENST00000309641 G3V3G9 751 aa11.24□□□□□ -0.61
PDE4D-201ENST00000309641 IGHDP01880 384 aa11.24□□□□□ -0.61
PDE4D-201ENST00000309641 DCAF8Q5TAQ9 597 aa11.24□□□□□ -0.61
PDE4D-201ENST00000309641 FBXO33Q7Z6M2 555 aa11.24□□□□□ -0.61
PDE4D-201ENST00000309641 NEUROD6Q96NK8 337 aa11.24□□□□□ -0.61
PDE4D-201ENST00000309641 DCTPP1Q9H773 170 aa11.24□□□□□ -0.61
PDE4D-201ENST00000309641 TLR7Q9NYK1 1049 aaKnown RBP11.24□□□□□ -0.61
PDE4D-201ENST00000309641 ZBTB12Q9Y330 459 aaPredicted RBP11.24□□□□□ -0.61
PDE4D-201ENST00000309641 GJA3Q9Y6H8 435 aa11.24□□□□□ -0.61
PDE4D-201ENST00000309641 ZNF609O15014 1411 aa11.23□□□□□ -0.61
PDE4D-201ENST00000309641 GLTPD2A6NH11 291 aa11.23□□□□□ -0.61
PDE4D-201ENST00000309641 PSMD14O00487 310 aa11.23□□□□□ -0.61
PDE4D-201ENST00000309641 SMARCA5O60264 1052 aaPredicted RBP11.23□□□□□ -0.61
PDE4D-201ENST00000309641 IFIT1P09914 478 aaKnown RBP11.23□□□□□ -0.61
PDE4D-201ENST00000309641 SLC5A1P13866 664 aa11.23□□□□□ -0.61
PDE4D-201ENST00000309641 HIBADHP31937 336 aaKnown RBP11.23□□□□□ -0.61
PDE4D-201ENST00000309641 PHKA1P46020 1223 aa11.23□□□□□ -0.61
PDE4D-201ENST00000309641 EIF6P56537 245 aaKnown RBP11.23□□□□□ -0.61
PDE4D-201ENST00000309641 TNNI3KQ59H18 835 aa11.23□□□□□ -0.61
PDE4D-201ENST00000309641 RHPN1Q8TCX5 695 aa11.23□□□□□ -0.61
PDE4D-201ENST00000309641 EAF2Q96CJ1 260 aaPredicted RBP11.23□□□□□ -0.61
PDE4D-201ENST00000309641 COA1Q9GZY4 146 aa11.23□□□□□ -0.61
PDE4D-201ENST00000309641 FPGT-TNNI3KV9GXZ4 949 aa11.23□□□□□ -0.61
PDE4D-201ENST00000309641 SHTN1A0MZ66 631 aa11.23□□□□□ -0.61
PDE4D-201ENST00000309641 PODNQ7Z5L7 613 aa11.23□□□□□ -0.61
PDE4D-201ENST00000309641 XAGE2Q96GT9 111 aa11.23□□□□□ -0.61
PDE4D-201ENST00000309641 DBNDD2Q9BQY9 259 aa11.23□□□□□ -0.61
PDE4D-201ENST00000309641 CCDC8Q9H0W5 538 aaPredicted RBP11.23□□□□□ -0.61
PDE4D-201ENST00000309641 NMRK2Q9NPI5 230 aa11.23□□□□□ -0.61
PDE4D-201ENST00000309641 ZC3H4Q9UPT8 1303 aaKnown RBP11.22□□□□□ -0.61
PDE4D-201ENST00000309641 POTECB2RU33 542 aa11.22□□□□□ -0.61
PDE4D-201ENST00000309641 IL1R1P14778 569 aa11.22□□□□□ -0.61
PDE4D-201ENST00000309641 GTF2IP78347 998 aa11.22□□□□□ -0.61
PDE4D-201ENST00000309641 CIAPIN1Q6FI81 312 aa11.22□□□□□ -0.61
PDE4D-201ENST00000309641 ZNF804AQ7Z570 1209 aa11.22□□□□□ -0.61
PDE4D-201ENST00000309641 ZNF784Q8NCA9 323 aaPredicted RBP11.22□□□□□ -0.61
PDE4D-201ENST00000309641 TDRD7Q8NHU6 1098 aaKnown RBP11.22□□□□□ -0.61
PDE4D-201ENST00000309641 AKAP2Q9Y2D5 859 aa11.22□□□□□ -0.61
PDE4D-201ENST00000309641 DPY19L2Q6NUT2 758 aa11.21□□□□□ -0.61
PDE4D-201ENST00000309641 FBXW7Q969H0 707 aa11.21□□□□□ -0.61
PDE4D-201ENST00000309641 KIF1BPQ96EK5 621 aa11.21□□□□□ -0.61
PDE4D-201ENST00000309641 DBNLQ9UJU6 430 aaKnown RBP11.21□□□□□ -0.61
PDE4D-201ENST00000309641 ZNF646O15015 1829 aaPredicted RBP11.21□□□□□ -0.61
PDE4D-201ENST00000309641 SCNN1DP51172 638 aa11.21□□□□□ -0.62
PDE4D-201ENST00000309641 HDAC1Q13547 482 aaPredicted RBP11.21□□□□□ -0.62
PDE4D-201ENST00000309641 AAMPQ13685 434 aa11.21□□□□□ -0.62
PDE4D-201ENST00000309641 HSP90AB4PQ58FF6 505 aa11.21□□□□□ -0.62
PDE4D-201ENST00000309641 CAVIN4Q5BKX8 364 aa11.21□□□□□ -0.62
PDE4D-201ENST00000309641 CCDC102BQ68D86 513 aa11.21□□□□□ -0.62
PDE4D-201ENST00000309641 TTLL5Q6EMB2 1281 aa11.21□□□□□ -0.62
PDE4D-201ENST00000309641 VPS37DQ86XT2 251 aa11.21□□□□□ -0.62
PDE4D-201ENST00000309641 GPC2Q8N158 579 aa11.21□□□□□ -0.62
PDE4D-201ENST00000309641 CERS5Q8N5B7 392 aa11.21□□□□□ -0.62
PDE4D-201ENST00000309641 RRAGCQ9HB90 399 aa11.21□□□□□ -0.62
PDE4D-201ENST00000309641 COL1A1P02452 1464 aaPredicted RBP11.21□□□□□ -0.62
PDE4D-201ENST00000309641 ARAP2Q8WZ64 1704 aa11.2□□□□□ -0.62
PDE4D-201ENST00000309641 USP17L3A6NCW0 530 aa11.2□□□□□ -0.62
PDE4D-201ENST00000309641 USP17L4A6NCW7 530 aa11.2□□□□□ -0.62
PDE4D-201ENST00000309641 RAB11FIP3O75154 756 aa11.2□□□□□ -0.62
PDE4D-201ENST00000309641 VIL1P09327 827 aaKnown RBP11.2□□□□□ -0.62
PDE4D-201ENST00000309641 GMPSP49915 693 aaPredicted RBP11.2□□□□□ -0.62
PDE4D-201ENST00000309641 SCARF1Q14162 830 aa11.2□□□□□ -0.62
PDE4D-201ENST00000309641 DACT2Q5SW24 774 aa11.2□□□□□ -0.62
PDE4D-201ENST00000309641 PI16Q6UXB8 463 aa11.2□□□□□ -0.62
PDE4D-201ENST00000309641 USP17L1Q7RTZ2 530 aa11.2□□□□□ -0.62
PDE4D-201ENST00000309641 AACSQ86V21 672 aa11.2□□□□□ -0.62
PDE4D-201ENST00000309641 ERC1Q8IUD2 1116 aa11.2□□□□□ -0.62
PDE4D-201ENST00000309641 GPR108Q9NPR9 543 aa11.2□□□□□ -0.62
PDE4D-201ENST00000309641 EPS15P42566 896 aa11.19□□□□□ -0.62
PDE4D-201ENST00000309641 CHAF1AQ13111 956 aaPredicted RBP11.19□□□□□ -0.62
PDE4D-201ENST00000309641 GRIK5Q16478 980 aa11.19□□□□□ -0.62
PDE4D-201ENST00000309641 C16orf71Q8IYS4 520 aaPredicted RBP11.19□□□□□ -0.62
PDE4D-201ENST00000309641 LRRCC1Q9C099 1032 aa11.19□□□□□ -0.62
PDE4D-201ENST00000309641 PSME4Q14997 1843 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 372.6 ms