RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 GCC1Q96CN9 775 aa22.07■■□□□ 1.12
SSSCA1-201ENST00000309328 EXOC6BQ9Y2D4 811 aa22.07■■□□□ 1.12
SSSCA1-201ENST00000309328 SPEF2Q9C093 1822 aa22.07■■□□□ 1.12
SSSCA1-201ENST00000309328 FZD9O00144 591 aa22.06■■□□□ 1.12
SSSCA1-201ENST00000309328 SASH1O94885 1247 aa22.06■■□□□ 1.12
SSSCA1-201ENST00000309328 EIF6P56537 245 aaKnown RBP22.06■■□□□ 1.12
SSSCA1-201ENST00000309328 IRX6P78412 446 aaPredicted RBP22.06■■□□□ 1.12
SSSCA1-201ENST00000309328 VPS37DQ86XT2 251 aa22.06■■□□□ 1.12
SSSCA1-201ENST00000309328 RIMBP2O15034 1052 aa22.05■■□□□ 1.12
SSSCA1-201ENST00000309328 ZBTB22O15209 634 aa22.05■■□□□ 1.12
SSSCA1-201ENST00000309328 PRELPP51888 382 aa22.05■■□□□ 1.12
SSSCA1-201ENST00000309328 ECE2O60344 883 aa22.04■■□□□ 1.12
SSSCA1-201ENST00000309328 HIBADHP31937 336 aaKnown RBP22.04■■□□□ 1.12
SSSCA1-201ENST00000309328 DPY19L2Q6NUT2 758 aa22.04■■□□□ 1.12
SSSCA1-201ENST00000309328 CLASRPQ8N2M8 674 aaKnown RBP22.04■■□□□ 1.12
SSSCA1-201ENST00000309328 RHPN1Q8TCX5 695 aa22.04■■□□□ 1.12
SSSCA1-201ENST00000309328 GNL3LQ9NVN8 582 aaKnown RBP22.04■■□□□ 1.12
SSSCA1-201ENST00000309328 IRS2Q9Y4H2 1338 aa22.04■■□□□ 1.12
SSSCA1-201ENST00000309328 A0A1B0GUL7 405 aa22.03■■□□□ 1.12
SSSCA1-201ENST00000309328 TNIP1Q15025 636 aa22.03■■□□□ 1.12
SSSCA1-201ENST00000309328 LRRCC1Q9C099 1032 aa22.03■■□□□ 1.12
SSSCA1-201ENST00000309328 ZBTB47Q9UFB7 747 aaPredicted RBP22.03■■□□□ 1.12
SSSCA1-201ENST00000309328 IL1R1P14778 569 aa22.02■■□□□ 1.12
SSSCA1-201ENST00000309328 TNNI3KQ59H18 835 aa22.02■■□□□ 1.12
SSSCA1-201ENST00000309328 FBXO33Q7Z6M2 555 aa22.02■■□□□ 1.12
SSSCA1-201ENST00000309328 FPGT-TNNI3KV9GXZ4 949 aa22.02■■□□□ 1.12
SSSCA1-201ENST00000309328 ZNF609O15014 1411 aa22.02■■□□□ 1.12
SSSCA1-201ENST00000309328 FAM84BQ96KN1 310 aaPredicted RBP22.01■■□□□ 1.11
SSSCA1-201ENST00000309328 GPR101Q96P66 508 aaPredicted RBP22.01■■□□□ 1.11
SSSCA1-201ENST00000309328 DBNDD1Q9H9R9 158 aa22.01■■□□□ 1.11
SSSCA1-201ENST00000309328 CD209Q9NNX6 404 aa22.01■■□□□ 1.11
SSSCA1-201ENST00000309328 A0A1B0GUL6 1792 aa22■■□□□ 1.11
SSSCA1-201ENST00000309328 SNAP23O00161 211 aa22■■□□□ 1.11
SSSCA1-201ENST00000309328 SEMA3EO15041 775 aa22■■□□□ 1.11
SSSCA1-201ENST00000309328 DOK7Q18PE1 504 aa22■■□□□ 1.11
SSSCA1-201ENST00000309328 GORABQ5T7V8 394 aa22■■□□□ 1.11
SSSCA1-201ENST00000309328 TXNRD3Q86VQ6 643 aa22■■□□□ 1.11
SSSCA1-201ENST00000309328 GPC2Q8N158 579 aa22■■□□□ 1.11
SSSCA1-201ENST00000309328 NEUROD6Q96NK8 337 aa22■■□□□ 1.11
SSSCA1-201ENST00000309328 SBF1O95248 1867 aa22■■□□□ 1.11
SSSCA1-201ENST00000309328 CHD4Q14839 1912 aa22■■□□□ 1.11
SSSCA1-201ENST00000309328 WTIPA6NIX2 430 aaPredicted RBP21.99■■□□□ 1.11
SSSCA1-201ENST00000309328 KLRK1P26718 216 aa21.99■■□□□ 1.11
SSSCA1-201ENST00000309328 CIAPIN1Q6FI81 312 aa21.99■■□□□ 1.11
SSSCA1-201ENST00000309328 XAGE2Q96GT9 111 aa21.99■■□□□ 1.11
SSSCA1-201ENST00000309328 KDM2BQ8NHM5 1336 aa21.99■■□□□ 1.11
SSSCA1-201ENST00000309328 DICER1Q9UPY3 1922 aaKnown RBP21.98■■□□□ 1.11
SSSCA1-201ENST00000309328 USP17L3A6NCW0 530 aa21.98■■□□□ 1.11
SSSCA1-201ENST00000309328 USP17L4A6NCW7 530 aa21.98■■□□□ 1.11
SSSCA1-201ENST00000309328 GLTPD2A6NH11 291 aa21.98■■□□□ 1.11
SSSCA1-201ENST00000309328 GYG1P46976 350 aa21.98■■□□□ 1.11
SSSCA1-201ENST00000309328 MMP14P50281 582 aa21.98■■□□□ 1.11
SSSCA1-201ENST00000309328 TIMM10P62072 90 aa21.98■■□□□ 1.11
SSSCA1-201ENST00000309328 CCDC158Q5M9N0 1113 aa21.98■■□□□ 1.11
SSSCA1-201ENST00000309328 STRIP1Q5VSL9 837 aa21.98■■□□□ 1.11
SSSCA1-201ENST00000309328 USP17L1Q7RTZ2 530 aa21.98■■□□□ 1.11
SSSCA1-201ENST00000309328 TDRD7Q8NHU6 1098 aaKnown RBP21.98■■□□□ 1.11
SSSCA1-201ENST00000309328 MYO3BQ8WXR4 1341 aa21.98■■□□□ 1.11
SSSCA1-201ENST00000309328 FRAT2O75474 233 aaPredicted RBP21.97■■□□□ 1.11
SSSCA1-201ENST00000309328 IFIT2P09913 472 aaKnown RBP21.97■■□□□ 1.11
SSSCA1-201ENST00000309328 UQCRFS1P1P0C7P4 283 aa21.97■■□□□ 1.11
SSSCA1-201ENST00000309328 RPS12P25398 132 aaKnown RBP21.97■■□□□ 1.11
SSSCA1-201ENST00000309328 AACSQ86V21 672 aa21.97■■□□□ 1.11
SSSCA1-201ENST00000309328 SMC5Q8IY18 1101 aa21.97■■□□□ 1.11
SSSCA1-201ENST00000309328 COL4A5P29400 1685 aa21.96■■□□□ 1.11
SSSCA1-201ENST00000309328 YDJCA8MPS7 323 aa21.96■■□□□ 1.11
SSSCA1-201ENST00000309328 FKBP1AP62942 108 aaKnown RBP21.96■■□□□ 1.11
SSSCA1-201ENST00000309328 CXCL9Q07325 125 aa21.96■■□□□ 1.11
SSSCA1-201ENST00000309328 TBC1D22AQ8WUA7 517 aa21.96■■□□□ 1.11
SSSCA1-201ENST00000309328 ZNF512BQ96KM6 892 aaPredicted RBP21.96■■□□□ 1.11
SSSCA1-201ENST00000309328 DENND2AQ9ULE3 1009 aa21.96■■□□□ 1.11
SSSCA1-201ENST00000309328 PDS5AQ29RF7 1337 aaKnown RBP21.96■■□□□ 1.11
SSSCA1-201ENST00000309328 APBB1O00213 710 aa21.95■■□□□ 1.1
SSSCA1-201ENST00000309328 VIL1P09327 827 aaKnown RBP21.95■■□□□ 1.1
SSSCA1-201ENST00000309328 BCAMP50895 628 aa21.95■■□□□ 1.1
SSSCA1-201ENST00000309328 CCDC102BQ68D86 513 aa21.95■■□□□ 1.1
SSSCA1-201ENST00000309328 EAF2Q96CJ1 260 aaPredicted RBP21.95■■□□□ 1.1
SSSCA1-201ENST00000309328 GPATCH3Q96I76 525 aa21.95■■□□□ 1.1
SSSCA1-201ENST00000309328 IL1RAPL2Q9NP60 686 aa21.95■■□□□ 1.1
SSSCA1-201ENST00000309328 TIAM2Q8IVF5 1701 aa21.94■■□□□ 1.1
SSSCA1-201ENST00000309328 YY1P25490 414 aa21.94■■□□□ 1.1
SSSCA1-201ENST00000309328 TTLL5Q6EMB2 1281 aa21.94■■□□□ 1.1
SSSCA1-201ENST00000309328 AGBL3Q8NEM8 1001 aa21.94■■□□□ 1.1
SSSCA1-201ENST00000309328 L3MBTL3Q96JM7 780 aaPredicted RBP21.94■■□□□ 1.1
SSSCA1-201ENST00000309328 FAM205AQ6ZU69 1335 aa21.94■■□□□ 1.1
SSSCA1-201ENST00000309328 IQCA1LA6NCM1 817 aa21.93■■□□□ 1.1
SSSCA1-201ENST00000309328 RAD17O75943 681 aa21.93■■□□□ 1.1
SSSCA1-201ENST00000309328 ARID4AP29374 1257 aaPredicted RBP21.93■■□□□ 1.1
SSSCA1-201ENST00000309328 ADORA1P30542 326 aa21.93■■□□□ 1.1
SSSCA1-201ENST00000309328 WDR66Q8TBY9 1149 aa21.93■■□□□ 1.1
SSSCA1-201ENST00000309328 DPF2Q92785 391 aa21.93■■□□□ 1.1
SSSCA1-201ENST00000309328 ZNF541Q9H0D2 1346 aa21.93■■□□□ 1.1
SSSCA1-201ENST00000309328 DBNLQ9UJU6 430 aaKnown RBP21.93■■□□□ 1.1
SSSCA1-201ENST00000309328 ARAP2Q8WZ64 1704 aa21.92■■□□□ 1.1
SSSCA1-201ENST00000309328 PSMD14O00487 310 aa21.92■■□□□ 1.1
SSSCA1-201ENST00000309328 IGSF3O75054 1194 aa21.92■■□□□ 1.1
SSSCA1-201ENST00000309328 PHKA1P46020 1223 aa21.92■■□□□ 1.1
SSSCA1-201ENST00000309328 TTC39AQ5SRH9 613 aa21.92■■□□□ 1.1
SSSCA1-201ENST00000309328 RSBN1LQ6PCB5 846 aaPredicted RBP21.92■■□□□ 1.1
SSSCA1-201ENST00000309328 ZGPATQ8N5A5 531 aaKnown RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms