RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 CHGBP05060 677 aa12.21□□□□□ -0.46
APOBEC3F-201ENST00000308521 CNTROBQ8N137 903 aa12.21□□□□□ -0.46
APOBEC3F-201ENST00000308521 GPATCH3Q96I76 525 aa12.21□□□□□ -0.46
APOBEC3F-201ENST00000308521 SRP68Q9UHB9 627 aaKnown RBP12.21□□□□□ -0.46
APOBEC3F-201ENST00000308521 LIMCH1Q9UPQ0 1083 aa12.21□□□□□ -0.46
APOBEC3F-201ENST00000308521 CNPY2Q9Y2B0 182 aa12.21□□□□□ -0.46
APOBEC3F-201ENST00000308521 SNX14Q9Y5W7 946 aa12.21□□□□□ -0.46
APOBEC3F-201ENST00000308521 EYA2O00167 538 aa12.2□□□□□ -0.46
APOBEC3F-201ENST00000308521 F13A1P00488 732 aa12.2□□□□□ -0.46
APOBEC3F-201ENST00000308521 ITGA6P23229 1130 aa12.2□□□□□ -0.46
APOBEC3F-201ENST00000308521 IFIT5Q13325 482 aaKnown RBP12.2□□□□□ -0.46
APOBEC3F-201ENST00000308521 FEZ1Q99689 392 aa12.2□□□□□ -0.46
APOBEC3F-201ENST00000308521 COL15A1P39059 1388 aa12.2□□□□□ -0.46
APOBEC3F-201ENST00000308521 NUP98P52948 1817 aa12.2□□□□□ -0.46
APOBEC3F-201ENST00000308521 GNPATO15228 680 aa12.2□□□□□ -0.46
APOBEC3F-201ENST00000308521 ONECUT3O60422 494 aaPredicted RBP12.2□□□□□ -0.46
APOBEC3F-201ENST00000308521 GABPB1Q06547 395 aaPredicted RBP12.2□□□□□ -0.46
APOBEC3F-201ENST00000308521 CCDC24Q8N4L8 307 aa12.2□□□□□ -0.46
APOBEC3F-201ENST00000308521 LSG1Q9H089 658 aaKnown RBP12.2□□□□□ -0.46
APOBEC3F-201ENST00000308521 CSF1RP07333 972 aa12.19□□□□□ -0.46
APOBEC3F-201ENST00000308521 SYT1P21579 422 aa12.19□□□□□ -0.46
APOBEC3F-201ENST00000308521 FAM193AP78312 1265 aa12.19□□□□□ -0.46
APOBEC3F-201ENST00000308521 TSPYL1Q9H0U9 437 aa12.19□□□□□ -0.46
APOBEC3F-201ENST00000308521 USP42Q9H9J4 1324 aaKnown RBP12.19□□□□□ -0.46
APOBEC3F-201ENST00000308521 TRIM37O94972 964 aa12.19□□□□□ -0.46
APOBEC3F-201ENST00000308521 CTSWP56202 376 aa12.19□□□□□ -0.46
APOBEC3F-201ENST00000308521 FOXD4L6Q3SYB3 417 aaPredicted RBP12.19□□□□□ -0.46
APOBEC3F-201ENST00000308521 FOXD4L3Q6VB84 417 aaPredicted RBP12.19□□□□□ -0.46
APOBEC3F-201ENST00000308521 TTC12Q9H892 705 aaPredicted RBP12.19□□□□□ -0.46
APOBEC3F-201ENST00000308521 ATRNO75882 1429 aa12.18□□□□□ -0.46
APOBEC3F-201ENST00000308521 CCDC66A2RUB6 948 aa12.18□□□□□ -0.46
APOBEC3F-201ENST00000308521 IL15P40933 162 aaPredicted RBP12.18□□□□□ -0.46
APOBEC3F-201ENST00000308521 AK2P54819 239 aa12.18□□□□□ -0.46
APOBEC3F-201ENST00000308521 USPL1Q5W0Q7 1092 aa12.18□□□□□ -0.46
APOBEC3F-201ENST00000308521 LDHAL6AQ6ZMR3 332 aa12.18□□□□□ -0.46
APOBEC3F-201ENST00000308521 PAXIP1Q6ZW49 1069 aaPredicted RBP12.18□□□□□ -0.46
APOBEC3F-201ENST00000308521 RUFY3Q7L099 469 aa12.18□□□□□ -0.46
APOBEC3F-201ENST00000308521 ZNF710Q8N1W2 664 aa12.18□□□□□ -0.46
APOBEC3F-201ENST00000308521 SMC3Q9UQE7 1217 aa12.18□□□□□ -0.46
APOBEC3F-201ENST00000308521 HELBQ8NG08 1087 aaPredicted RBP12.18□□□□□ -0.46
APOBEC3F-201ENST00000308521 UTP14AQ9BVJ6 771 aaKnown RBP12.18□□□□□ -0.46
APOBEC3F-201ENST00000308521 SEC31BQ9NQW1 1179 aa12.18□□□□□ -0.46
APOBEC3F-201ENST00000308521 LRRC4BQ9NT99 713 aa12.18□□□□□ -0.46
APOBEC3F-201ENST00000308521 KIF3AQ9Y496 699 aa12.18□□□□□ -0.46
APOBEC3F-201ENST00000308521 SNAP23O00161 211 aa12.17□□□□□ -0.46
APOBEC3F-201ENST00000308521 PDE8AO60658 829 aa12.17□□□□□ -0.46
APOBEC3F-201ENST00000308521 ZSCAN31Q96LW9 406 aaPredicted RBP12.17□□□□□ -0.46
APOBEC3F-201ENST00000308521 FAM227BQ96M60 508 aa12.17□□□□□ -0.46
APOBEC3F-201ENST00000308521 CEP126Q9P2H0 1117 aa12.17□□□□□ -0.46
APOBEC3F-201ENST00000308521 U3KPZ7 1027 aaPredicted RBP12.17□□□□□ -0.46
APOBEC3F-201ENST00000308521 A0A1B0GUL7 405 aa12.17□□□□□ -0.46
APOBEC3F-201ENST00000308521 ADORA1P30542 326 aa12.17□□□□□ -0.46
APOBEC3F-201ENST00000308521 SLFNL1Q499Z3 407 aa12.17□□□□□ -0.46
APOBEC3F-201ENST00000308521 KIAA1524Q8TCG1 905 aa12.17□□□□□ -0.46
APOBEC3F-201ENST00000308521 PLA2G12BQ9BX93 195 aa12.17□□□□□ -0.46
APOBEC3F-201ENST00000308521 SH3TC1Q8TE82 1336 aa12.17□□□□□ -0.46
APOBEC3F-201ENST00000308521 THSD7AQ9UPZ6 1657 aa12.17□□□□□ -0.46
APOBEC3F-201ENST00000308521 TBC1D9BQ66K14 1250 aa12.16□□□□□ -0.46
APOBEC3F-201ENST00000308521 DDX46Q7L014 1031 aaKnown RBP12.16□□□□□ -0.46
APOBEC3F-201ENST00000308521 KRT27Q7Z3Y8 459 aa12.16□□□□□ -0.46
APOBEC3F-201ENST00000308521 KCNB2Q92953 911 aa12.16□□□□□ -0.46
APOBEC3F-201ENST00000308521 FSD1Q9BTV5 496 aa12.16□□□□□ -0.46
APOBEC3F-201ENST00000308521 CNNM1Q9NRU3 951 aa12.16□□□□□ -0.46
APOBEC3F-201ENST00000308521 DIAPH3Q9NSV4 1193 aa12.16□□□□□ -0.46
APOBEC3F-201ENST00000308521 CDHR2Q9BYE9 1310 aa12.16□□□□□ -0.46
APOBEC3F-201ENST00000308521 BTAF1O14981 1849 aa12.16□□□□□ -0.46
APOBEC3F-201ENST00000308521 ANKRD18BA2A2Z9 1011 aa12.16□□□□□ -0.46
APOBEC3F-201ENST00000308521 RASEFQ8IZ41 740 aa12.16□□□□□ -0.46
APOBEC3F-201ENST00000308521 EVI5LQ96CN4 794 aa12.16□□□□□ -0.46
APOBEC3F-201ENST00000308521 TM6SF1Q9BZW5 370 aa12.16□□□□□ -0.46
APOBEC3F-201ENST00000308521 BCL2L12Q9HB09 334 aa12.16□□□□□ -0.46
APOBEC3F-201ENST00000308521 SH2B1Q9NRF2 756 aaPredicted RBP12.16□□□□□ -0.46
APOBEC3F-201ENST00000308521 GOLGA6L6A8MZA4 724 aa12.15□□□□□ -0.46
APOBEC3F-201ENST00000308521 CBX1P83916 185 aa12.15□□□□□ -0.46
APOBEC3F-201ENST00000308521 METTL24Q5JXM2 366 aa12.15□□□□□ -0.46
APOBEC3F-201ENST00000308521 VPS53Q5VIR6 699 aa12.15□□□□□ -0.46
APOBEC3F-201ENST00000308521 FAM196AQ6ZSG2 479 aa12.15□□□□□ -0.46
APOBEC3F-201ENST00000308521 ARHGEF1Q92888 912 aaKnown RBP12.15□□□□□ -0.46
APOBEC3F-201ENST00000308521 SNRKQ9NRH2 765 aa12.15□□□□□ -0.46
APOBEC3F-201ENST00000308521 MTMR6Q9Y217 621 aa12.15□□□□□ -0.46
APOBEC3F-201ENST00000308521 NTSR2O95665 410 aa12.15□□□□□ -0.46
APOBEC3F-201ENST00000308521 BRD2P25440 801 aaKnown RBP12.15□□□□□ -0.46
APOBEC3F-201ENST00000308521 ERFEQ4G0M1 354 aa12.15□□□□□ -0.46
APOBEC3F-201ENST00000308521 C3orf67Q6ZVT6 689 aa12.15□□□□□ -0.46
APOBEC3F-201ENST00000308521 CREBRFQ8IUR6 639 aa12.15□□□□□ -0.46
APOBEC3F-201ENST00000308521 RTCBQ9Y3I0 505 aaKnown RBP12.15□□□□□ -0.46
APOBEC3F-201ENST00000308521 RPS6KA4O75676 772 aa12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 ATP5JP18859 108 aa12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 IRX3P78415 501 aaPredicted RBP12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 NMIQ13287 307 aaPredicted RBP12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 RIPOR2Q9Y4F9 1068 aa12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 GOLIM4O00461 696 aa12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 FIBPO43427 364 aa12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 ZPR1O75312 459 aa12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 TAF5LO75529 589 aa12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 CCDC192P0DO97 292 aa12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 PTH1RQ03431 593 aa12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 GORABQ5T7V8 394 aa12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 GIMAP6Q6P9H5 292 aa12.14□□□□□ -0.47
APOBEC3F-201ENST00000308521 RUFY2Q8WXA3 655 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms