RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 COL24A1Q17RW2 1714 aa12.98□□□□□ -0.33
CASP3-201ENST00000308394 ZNF609O15014 1411 aa12.98□□□□□ -0.33
CASP3-201ENST00000308394 TAF5LO75529 589 aa12.97□□□□□ -0.33
CASP3-201ENST00000308394 EVI5LQ96CN4 794 aa12.97□□□□□ -0.33
CASP3-201ENST00000308394 XAGE2Q96GT9 111 aa12.97□□□□□ -0.33
CASP3-201ENST00000308394 C22orf23Q9BZE7 217 aa12.97□□□□□ -0.33
CASP3-201ENST00000308394 LAMB2P55268 1798 aa12.97□□□□□ -0.33
CASP3-201ENST00000308394 CHMLP26374 656 aa12.97□□□□□ -0.33
CASP3-201ENST00000308394 ADORA1P30542 326 aa12.97□□□□□ -0.33
CASP3-201ENST00000308394 DDR1Q08345 913 aa12.97□□□□□ -0.33
CASP3-201ENST00000308394 CCDC158Q5M9N0 1113 aa12.97□□□□□ -0.33
CASP3-201ENST00000308394 DDX46Q7L014 1031 aaKnown RBP12.97□□□□□ -0.33
CASP3-201ENST00000308394 VGLL2Q8N8G2 317 aa12.97□□□□□ -0.33
CASP3-201ENST00000308394 CELF1Q92879 486 aaKnown RBP12.97□□□□□ -0.33
CASP3-201ENST00000308394 RIC1Q4ADV7 1423 aa12.97□□□□□ -0.33
CASP3-201ENST00000308394 POLRMTO00411 1230 aaKnown RBP12.96□□□□□ -0.33
CASP3-201ENST00000308394 MSL1Q68DK7 614 aa12.96□□□□□ -0.33
CASP3-201ENST00000308394 NDUFB9Q9Y6M9 179 aa12.96□□□□□ -0.33
CASP3-201ENST00000308394 TTC39AQ5SRH9 613 aa12.96□□□□□ -0.33
CASP3-201ENST00000308394 RGPD3A6NKT7 1758 aaPredicted RBP12.96□□□□□ -0.34
CASP3-201ENST00000308394 RGPD4Q7Z3J3 1758 aa12.96□□□□□ -0.34
CASP3-201ENST00000308394 RPS8P62241 208 aaKnown RBP12.96□□□□□ -0.34
CASP3-201ENST00000308394 CHRNDQ07001 517 aa12.96□□□□□ -0.34
CASP3-201ENST00000308394 PUM3Q15397 648 aaKnown RBP12.96□□□□□ -0.34
CASP3-201ENST00000308394 TBC1D32Q96NH3 1257 aa12.96□□□□□ -0.34
CASP3-201ENST00000308394 IFIT1P09914 478 aaKnown RBP12.95□□□□□ -0.34
CASP3-201ENST00000308394 EDC3Q96F86 508 aaKnown RBP12.95□□□□□ -0.34
CASP3-201ENST00000308394 BSDC1Q9NW68 430 aaPredicted RBP12.95□□□□□ -0.34
CASP3-201ENST00000308394 SNAP23O00161 211 aa12.95□□□□□ -0.34
CASP3-201ENST00000308394 LPIN2Q92539 896 aa12.95□□□□□ -0.34
CASP3-201ENST00000308394 RPGRQ92834 1020 aaKnown RBP12.95□□□□□ -0.34
CASP3-201ENST00000308394 FSD1Q9BTV5 496 aa12.95□□□□□ -0.34
CASP3-201ENST00000308394 MMP10P09238 476 aa12.94□□□□□ -0.34
CASP3-201ENST00000308394 CWC27Q6UX04 472 aaKnown RBP12.94□□□□□ -0.34
CASP3-201ENST00000308394 HAUS7Q99871 368 aa12.94□□□□□ -0.34
CASP3-201ENST00000308394 ESYT1Q9BSJ8 1104 aa12.94□□□□□ -0.34
CASP3-201ENST00000308394 DIAPH3Q9NSV4 1193 aa12.94□□□□□ -0.34
CASP3-201ENST00000308394 PARP3Q9Y6F1 533 aa12.94□□□□□ -0.34
CASP3-201ENST00000308394 REC8O95072 547 aa12.94□□□□□ -0.34
CASP3-201ENST00000308394 SLC5A1P13866 664 aa12.94□□□□□ -0.34
CASP3-201ENST00000308394 TUBGCP6Q96RT7 1819 aa12.93□□□□□ -0.34
CASP3-201ENST00000308394 FKBP4Q02790 459 aaKnown RBP eCLIP12.93□□□□□ -0.34
CASP3-201ENST00000308394 MINPP1Q9UNW1 487 aa12.93□□□□□ -0.34
CASP3-201ENST00000308394 LRP5O75197 1615 aa12.93□□□□□ -0.34
CASP3-201ENST00000308394 GOLIM4O00461 696 aa12.93□□□□□ -0.34
CASP3-201ENST00000308394 MMP14P50281 582 aa12.93□□□□□ -0.34
CASP3-201ENST00000308394 COL4A1P02462 1669 aa12.92□□□□□ -0.34
CASP3-201ENST00000308394 FGFR2P21802 821 aa12.92□□□□□ -0.34
CASP3-201ENST00000308394 SNRKQ9NRH2 765 aa12.92□□□□□ -0.34
CASP3-201ENST00000308394 PAG1Q9NWQ8 432 aa12.92□□□□□ -0.34
CASP3-201ENST00000308394 ANO2Q9NQ90 1003 aa12.92□□□□□ -0.34
CASP3-201ENST00000308394 SPEF2Q9C093 1822 aa12.92□□□□□ -0.34
CASP3-201ENST00000308394 TAF1P21675 1872 aa12.92□□□□□ -0.34
CASP3-201ENST00000308394 TNRC6CQ9HCJ0 1690 aaKnown RBP12.91□□□□□ -0.34
CASP3-201ENST00000308394 MYCNP04198 464 aaPredicted RBP12.91□□□□□ -0.34
CASP3-201ENST00000308394 GRAPQ13588 217 aa12.91□□□□□ -0.34
CASP3-201ENST00000308394 CCDC102BQ68D86 513 aa12.91□□□□□ -0.34
CASP3-201ENST00000308394 CCDC125Q86Z20 511 aa12.91□□□□□ -0.34
CASP3-201ENST00000308394 PIAS4Q8N2W9 510 aaPredicted RBP12.91□□□□□ -0.34
CASP3-201ENST00000308394 GRAPLQ8TC17 118 aaPredicted RBP12.91□□□□□ -0.34
CASP3-201ENST00000308394 RUFY2Q8WXA3 655 aa12.91□□□□□ -0.34
CASP3-201ENST00000308394 USP26Q9BXU7 913 aa12.91□□□□□ -0.34
CASP3-201ENST00000308394 HIP1O00291 1037 aa12.91□□□□□ -0.34
CASP3-201ENST00000308394 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.91□□□□□ -0.34
CASP3-201ENST00000308394 RBM17Q96I25 401 aaKnown RBP12.91□□□□□ -0.34
CASP3-201ENST00000308394 IPO9Q96P70 1041 aaKnown RBP12.91□□□□□ -0.34
CASP3-201ENST00000308394 AK9Q5TCS8 1911 aa12.91□□□□□ -0.34
CASP3-201ENST00000308394 PHKA1P46020 1223 aa12.9□□□□□ -0.34
CASP3-201ENST00000308394 KCNJ4P48050 445 aa12.9□□□□□ -0.34
CASP3-201ENST00000308394 SCARF1Q14162 830 aa12.9□□□□□ -0.34
CASP3-201ENST00000308394 CRY2Q49AN0 593 aa12.9□□□□□ -0.34
CASP3-201ENST00000308394 IL25Q9H293 177 aa12.9□□□□□ -0.34
CASP3-201ENST00000308394 CASZ1Q86V15 1759 aa12.9□□□□□ -0.34
CASP3-201ENST00000308394 TMTC2Q8N394 836 aa12.9□□□□□ -0.34
CASP3-201ENST00000308394 DDRGK1Q96HY6 314 aa12.9□□□□□ -0.34
CASP3-201ENST00000308394 BRIP1Q9BX63 1249 aa12.9□□□□□ -0.34
CASP3-201ENST00000308394 ANTXR1Q9H6X2 564 aa12.9□□□□□ -0.34
CASP3-201ENST00000308394 WTIPA6NIX2 430 aaPredicted RBP12.89□□□□□ -0.35
CASP3-201ENST00000308394 SGSM2O43147 1006 aa12.89□□□□□ -0.35
CASP3-201ENST00000308394 ZAP70P43403 619 aa12.89□□□□□ -0.35
CASP3-201ENST00000308394 PI16Q6UXB8 463 aa12.89□□□□□ -0.35
CASP3-201ENST00000308394 KIAA1211Q6ZU35 1233 aa12.89□□□□□ -0.35
CASP3-201ENST00000308394 KBTBD3Q8NAB2 608 aa12.89□□□□□ -0.35
CASP3-201ENST00000308394 FAM227BQ96M60 508 aa12.89□□□□□ -0.35
CASP3-201ENST00000308394 PDGFDQ9GZP0 370 aaPredicted RBP12.89□□□□□ -0.35
CASP3-201ENST00000308394 ANKRD2Q9GZV1 360 aa12.89□□□□□ -0.35
CASP3-201ENST00000308394 MCAMP43121 646 aa12.89□□□□□ -0.35
CASP3-201ENST00000308394 BCAMP50895 628 aa12.89□□□□□ -0.35
CASP3-201ENST00000308394 IRX3P78415 501 aaPredicted RBP12.89□□□□□ -0.35
CASP3-201ENST00000308394 NMIQ13287 307 aaPredicted RBP12.89□□□□□ -0.35
CASP3-201ENST00000308394 UBE4AQ14139 1066 aa12.89□□□□□ -0.35
CASP3-201ENST00000308394 ANKIB1Q9P2G1 1089 aa12.89□□□□□ -0.35
CASP3-201ENST00000308394 UQCRFS1P1P0C7P4 283 aa12.88□□□□□ -0.35
CASP3-201ENST00000308394 APPP05067 770 aa12.88□□□□□ -0.35
CASP3-201ENST00000308394 VPS37DQ86XT2 251 aa12.88□□□□□ -0.35
CASP3-201ENST00000308394 CHGBP05060 677 aa12.87□□□□□ -0.35
CASP3-201ENST00000308394 PDE6BP35913 854 aa12.87□□□□□ -0.35
CASP3-201ENST00000308394 CAVIN4Q5BKX8 364 aa12.87□□□□□ -0.35
CASP3-201ENST00000308394 ZNF512BQ96KM6 892 aaPredicted RBP12.87□□□□□ -0.35
CASP3-201ENST00000308394 A0A0D9SFI3 127 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms