RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 EZRP15311 586 aaKnown RBP18.25■□□□□ 0.51
USP42-201ENST00000306177 DNA2P51530 1060 aa18.25■□□□□ 0.51
USP42-201ENST00000306177 AK2P54819 239 aa18.25■□□□□ 0.51
USP42-201ENST00000306177 TPTE2Q6XPS3 522 aa18.25■□□□□ 0.51
USP42-201ENST00000306177 FAM200AQ8TCP9 573 aa18.25■□□□□ 0.51
USP42-201ENST00000306177 ZMYM4Q5VZL5 1548 aa18.24■□□□□ 0.51
USP42-201ENST00000306177 DNM1Q05193 864 aaKnown RBP18.24■□□□□ 0.51
USP42-201ENST00000306177 ANO6Q4KMQ2 910 aa18.24■□□□□ 0.51
USP42-201ENST00000306177 TBCAO75347 108 aaKnown RBP18.24■□□□□ 0.51
USP42-201ENST00000306177 HOXB7P09629 217 aa18.24■□□□□ 0.51
USP42-201ENST00000306177 STAT6P42226 847 aa18.24■□□□□ 0.51
USP42-201ENST00000306177 CHMP4BP1P59074 171 aa18.24■□□□□ 0.51
USP42-201ENST00000306177 SAMM50Q9Y512 469 aa18.24■□□□□ 0.51
USP42-201ENST00000306177 RTL9Q8NET4 1388 aa18.24■□□□□ 0.51
USP42-201ENST00000306177 POTEB2H3BUK9 544 aa18.24■□□□□ 0.51
USP42-201ENST00000306177 RRAGBQ5VZM2 374 aa18.24■□□□□ 0.51
USP42-201ENST00000306177 HEATR3Q7Z4Q2 680 aa18.24■□□□□ 0.51
USP42-201ENST00000306177 DACT1Q9NYF0 836 aa18.24■□□□□ 0.51
USP42-201ENST00000306177 IBSPP21815 317 aaPredicted RBP18.23■□□□□ 0.51
USP42-201ENST00000306177 SYCP3Q8IZU3 236 aa18.23■□□□□ 0.51
USP42-201ENST00000306177 CTAGE1Q96RT6 745 aa18.23■□□□□ 0.51
USP42-201ENST00000306177 UBASH3AP57075 661 aa18.23■□□□□ 0.51
USP42-201ENST00000306177 HELBQ8NG08 1087 aaPredicted RBP18.23■□□□□ 0.51
USP42-201ENST00000306177 AFMP43652 599 aa18.23■□□□□ 0.51
USP42-201ENST00000306177 CCDC171Q6TFL3 1326 aa18.23■□□□□ 0.51
USP42-201ENST00000306177 LIG1P18858 919 aa18.22■□□□□ 0.51
USP42-201ENST00000306177 INTS4Q96HW7 963 aaKnown RBP18.22■□□□□ 0.51
USP42-201ENST00000306177 TMX1Q9H3N1 280 aa18.22■□□□□ 0.51
USP42-201ENST00000306177 RUFY3Q7L099 469 aa18.22■□□□□ 0.51
USP42-201ENST00000306177 DHX32Q7L7V1 743 aaKnown RBP18.22■□□□□ 0.51
USP42-201ENST00000306177 NAA15Q9BXJ9 866 aaKnown RBP18.22■□□□□ 0.51
USP42-201ENST00000306177 MBD5Q9P267 1494 aa18.22■□□□□ 0.51
USP42-201ENST00000306177 PLEKHG3A1L390 1219 aa18.22■□□□□ 0.51
USP42-201ENST00000306177 SPAG1Q07617 926 aa18.22■□□□□ 0.51
USP42-201ENST00000306177 ZFYVE16Q7Z3T8 1539 aa18.22■□□□□ 0.51
USP42-201ENST00000306177 HDAC9Q9UKV0 1011 aa18.22■□□□□ 0.51
USP42-201ENST00000306177 RTCBQ9Y3I0 505 aaKnown RBP18.22■□□□□ 0.51
USP42-201ENST00000306177 LGR6Q9HBX8 967 aa18.21■□□□□ 0.51
USP42-201ENST00000306177 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.21■□□□□ 0.511e-6■■□□□ 12.4
USP42-201ENST00000306177 SPTLC2O15270 562 aa18.21■□□□□ 0.51
USP42-201ENST00000306177 MARCKSP29966 332 aaPredicted RBP18.21■□□□□ 0.51
USP42-201ENST00000306177 MAGEB6Q8N7X4 407 aa18.21■□□□□ 0.51
USP42-201ENST00000306177 CFAP65Q6ZU64 1925 aaKnown RBP18.21■□□□□ 0.51
USP42-201ENST00000306177 F8W031 263 aaPredicted RBP18.21■□□□□ 0.51
USP42-201ENST00000306177 RAB3GAP1Q15042 981 aa18.21■□□□□ 0.51
USP42-201ENST00000306177 USP26Q9BXU7 913 aa18.21■□□□□ 0.51
USP42-201ENST00000306177 TRIM75PA6NK02 468 aa18.21■□□□□ 0.51
USP42-201ENST00000306177 NAPAP54920 295 aa18.21■□□□□ 0.51
USP42-201ENST00000306177 EHBP1Q8NDI1 1231 aa18.21■□□□□ 0.51
USP42-201ENST00000306177 ANKRD2Q9GZV1 360 aa18.2■□□□□ 0.5
USP42-201ENST00000306177 PLCG2P16885 1265 aa18.2■□□□□ 0.5
USP42-201ENST00000306177 CALML3P27482 149 aa18.2■□□□□ 0.5
USP42-201ENST00000306177 USP8P40818 1118 aa18.2■□□□□ 0.5
USP42-201ENST00000306177 APOBRQ0VD83 1088 aa18.2■□□□□ 0.5
USP42-201ENST00000306177 PICALMQ13492 652 aa18.2■□□□□ 0.5
USP42-201ENST00000306177 TRMT1LQ7Z2T5 733 aaKnown RBP18.2■□□□□ 0.5
USP42-201ENST00000306177 PLBD2Q8NHP8 589 aa18.2■□□□□ 0.5
USP42-201ENST00000306177 GSTTP1A0A1W2PQM5 241 aa18.2■□□□□ 0.5
USP42-201ENST00000306177 TMCO5BA8MYB1 307 aa18.2■□□□□ 0.5
USP42-201ENST00000306177 IFFO1Q0D2I5 559 aa18.2■□□□□ 0.5
USP42-201ENST00000306177 PLXNC1O60486 1568 aa18.2■□□□□ 0.5
USP42-201ENST00000306177 CEP135Q66GS9 1140 aa18.19■□□□□ 0.5
USP42-201ENST00000306177 DYDC1Q8WWB3 177 aa18.19■□□□□ 0.5
USP42-201ENST00000306177 HELLSQ9NRZ9 838 aa18.19■□□□□ 0.5
USP42-201ENST00000306177 METTL22Q9BUU2 404 aaPredicted RBP18.19■□□□□ 0.5
USP42-201ENST00000306177 C6orf50Q9HD87 102 aa18.19■□□□□ 0.5
USP42-201ENST00000306177 PAXBP1Q9Y5B6 917 aa18.19■□□□□ 0.5
USP42-201ENST00000306177 MYO5CQ9NQX4 1742 aa18.19■□□□□ 0.5
USP42-201ENST00000306177 RTL1A6NKG5 1358 aa18.19■□□□□ 0.5
USP42-201ENST00000306177 SHTN1A0MZ66 631 aa18.19■□□□□ 0.5
USP42-201ENST00000306177 GNG11P61952 73 aa18.19■□□□□ 0.5
USP42-201ENST00000306177 CTNNBL1Q8WYA6 563 aaPredicted RBP18.19■□□□□ 0.5
USP42-201ENST00000306177 PTPDC1A2A3K4 754 aa18.19■□□□□ 0.5
USP42-201ENST00000306177 MIGA1Q8NAN2 632 aa18.19■□□□□ 0.5
USP42-201ENST00000306177 CCDC113Q9H0I3 377 aa18.19■□□□□ 0.5
USP42-201ENST00000306177 YEATS2Q9ULM3 1422 aa18.19■□□□□ 0.5
USP42-201ENST00000306177 CHST3Q7LGC8 479 aa18.19■□□□□ 0.5
USP42-201ENST00000306177 OGFOD1Q8N543 542 aa18.19■□□□□ 0.5
USP42-201ENST00000306177 MCM9Q9NXL9 1143 aa18.19■□□□□ 0.5
USP42-201ENST00000306177 LMTK3Q96Q04 1460 aa18.18■□□□□ 0.5
USP42-201ENST00000306177 ERICH4A6NGS2 130 aa18.18■□□□□ 0.5
USP42-201ENST00000306177 NOP2P46087 812 aaKnown RBP18.18■□□□□ 0.5
USP42-201ENST00000306177 MACROD2A1Z1Q3 448 aa18.18■□□□□ 0.5
USP42-201ENST00000306177 AKR1B10O60218 316 aa18.18■□□□□ 0.5
USP42-201ENST00000306177 LTKP29376 864 aa18.18■□□□□ 0.5
USP42-201ENST00000306177 BLMP54132 1417 aaPredicted RBP18.18■□□□□ 0.5
USP42-201ENST00000306177 ABCA8O94911 1581 aa18.18■□□□□ 0.5
USP42-201ENST00000306177 INSRP06213 1382 aa18.18■□□□□ 0.5
USP42-201ENST00000306177 SBNO2Q9Y2G9 1366 aa18.18■□□□□ 0.5
USP42-201ENST00000306177 PSMA7O14818 248 aa18.18■□□□□ 0.5
USP42-201ENST00000306177 FAM89AQ96GI7 184 aa18.18■□□□□ 0.5
USP42-201ENST00000306177 MPHOSPH6Q99547 160 aaKnown RBP18.18■□□□□ 0.5
USP42-201ENST00000306177 DNAJC25Q9H1X3 360 aa18.18■□□□□ 0.5
USP42-201ENST00000306177 TAOK3Q9H2K8 898 aa18.18■□□□□ 0.5
USP42-201ENST00000306177 GOPCQ9HD26 462 aa18.18■□□□□ 0.5
USP42-201ENST00000306177 CCDC172P0C7W6 258 aa18.18■□□□□ 0.5
USP42-201ENST00000306177 BRAPQ7Z569 592 aa18.18■□□□□ 0.5
USP42-201ENST00000306177 SLC52A2Q9HAB3 445 aa18.18■□□□□ 0.5
USP42-201ENST00000306177 USP19O94966 1318 aa18.17■□□□□ 0.5
USP42-201ENST00000306177 AOPEPQ8N6M6 819 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms