RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 NOP2P46087 812 aaKnown RBP23.79■■□□□ 1.4
LTBP3-201ENST00000301873 MAP9Q49MG5 647 aa23.79■■□□□ 1.4
LTBP3-201ENST00000301873 CCDC178Q5BJE1 867 aa23.79■■□□□ 1.4
LTBP3-201ENST00000301873 HEATR3Q7Z4Q2 680 aa23.79■■□□□ 1.4
LTBP3-201ENST00000301873 PKNOX2Q96KN3 472 aa23.79■■□□□ 1.4
LTBP3-201ENST00000301873 UTP14AQ9BVJ6 771 aaKnown RBP23.79■■□□□ 1.4
LTBP3-201ENST00000301873 CCDC113Q9H0I3 377 aa23.79■■□□□ 1.4
LTBP3-201ENST00000301873 TMCO5BA8MYB1 307 aa23.78■■□□□ 1.4
LTBP3-201ENST00000301873 NSFL1CQ9UNZ2 370 aaKnown RBP23.78■■□□□ 1.4
LTBP3-201ENST00000301873 DYNC1I1O14576 645 aa23.78■■□□□ 1.4
LTBP3-201ENST00000301873 LIG1P18858 919 aa23.78■■□□□ 1.4
LTBP3-201ENST00000301873 ZKSCAN3Q9BRR0 538 aa23.78■■□□□ 1.4
LTBP3-201ENST00000301873 PTPRTO14522 1441 aa23.78■■□□□ 1.4
LTBP3-201ENST00000301873 SGSM2O43147 1006 aa23.78■■□□□ 1.4
LTBP3-201ENST00000301873 HLA-DOAP06340 250 aa23.78■■□□□ 1.4
LTBP3-201ENST00000301873 STX17P56962 302 aa23.78■■□□□ 1.4
LTBP3-201ENST00000301873 A1BGP04217 495 aa23.77■■□□□ 1.4
LTBP3-201ENST00000301873 TRERF1Q96PN7 1200 aa23.77■■□□□ 1.4
LTBP3-201ENST00000301873 JADE2Q9NQC1 790 aa23.77■■□□□ 1.4
LTBP3-201ENST00000301873 A0A1B0GVL5 298 aa23.77■■□□□ 1.4
LTBP3-201ENST00000301873 HLTFQ14527 1009 aaKnown RBP eCLIP23.77■■□□□ 1.4
LTBP3-201ENST00000301873 ZNF594Q96JF6 807 aaPredicted RBP23.77■■□□□ 1.4
LTBP3-201ENST00000301873 PTGS1P23219 599 aa23.77■■□□□ 1.39
LTBP3-201ENST00000301873 STAT6P42226 847 aa23.77■■□□□ 1.39
LTBP3-201ENST00000301873 EIF2AK4Q9P2K8 1649 aaKnown RBP23.76■■□□□ 1.39
LTBP3-201ENST00000301873 GOLGA6L9A6NEM1 432 aa23.76■■□□□ 1.39
LTBP3-201ENST00000301873 EYA2O00167 538 aa23.76■■□□□ 1.39
LTBP3-201ENST00000301873 CABP5Q9NP86 173 aa23.76■■□□□ 1.39
LTBP3-201ENST00000301873 RTL1A6NKG5 1358 aa23.76■■□□□ 1.39
LTBP3-201ENST00000301873 SPECC1Q5M775 1068 aa23.76■■□□□ 1.39
LTBP3-201ENST00000301873 MCM9Q9NXL9 1143 aa23.76■■□□□ 1.39
LTBP3-201ENST00000301873 PAXBP1Q9Y5B6 917 aa23.76■■□□□ 1.39
LTBP3-201ENST00000301873 PYM1Q9BRP8 204 aaKnown RBP23.76■■□□□ 1.39
LTBP3-201ENST00000301873 RBSNQ9H1K0 784 aa23.76■■□□□ 1.39
LTBP3-201ENST00000301873 NCOA5Q9HCD5 579 aaKnown RBP23.76■■□□□ 1.39
LTBP3-201ENST00000301873 BMP15O95972 392 aa23.75■■□□□ 1.39
LTBP3-201ENST00000301873 SNX14Q9Y5W7 946 aa23.75■■□□□ 1.39
LTBP3-201ENST00000301873 DISP1Q96F81 1524 aa23.75■■□□□ 1.39
LTBP3-201ENST00000301873 SAMM50Q9Y512 469 aa23.75■■□□□ 1.39
LTBP3-201ENST00000301873 MAGEB6P1A0A0J9YX57 407 aa23.75■■□□□ 1.39
LTBP3-201ENST00000301873 CETN2P41208 172 aa23.74■■□□□ 1.39
LTBP3-201ENST00000301873 MAPK8IP2Q13387 824 aaPredicted RBP23.74■■□□□ 1.39
LTBP3-201ENST00000301873 PRPF4BQ13523 1007 aaKnown RBP23.74■■□□□ 1.39
LTBP3-201ENST00000301873 EXOC1Q9NV70 894 aa23.74■■□□□ 1.39
LTBP3-201ENST00000301873 RAD50Q92878 1312 aa23.74■■□□□ 1.39
LTBP3-201ENST00000301873 PICALMQ13492 652 aa23.74■■□□□ 1.39
LTBP3-201ENST00000301873 TNNI3KQ59H18 835 aa23.74■■□□□ 1.39
LTBP3-201ENST00000301873 METTL22Q9BUU2 404 aaPredicted RBP23.74■■□□□ 1.39
LTBP3-201ENST00000301873 FPGT-TNNI3KV9GXZ4 949 aa23.74■■□□□ 1.39
LTBP3-201ENST00000301873 POTEJP0CG39 1038 aa23.73■■□□□ 1.39
LTBP3-201ENST00000301873 HMGB2P26583 209 aaKnown RBP23.73■■□□□ 1.39
LTBP3-201ENST00000301873 GNAQP50148 359 aa23.73■■□□□ 1.39
LTBP3-201ENST00000301873 SUCLG2Q96I99 432 aa23.73■■□□□ 1.39
LTBP3-201ENST00000301873 ZNF496Q96IT1 587 aaPredicted RBP23.73■■□□□ 1.39
LTBP3-201ENST00000301873 IFNKQ9P0W0 207 aa23.73■■□□□ 1.39
LTBP3-201ENST00000301873 SLC27A2O14975 620 aa23.73■■□□□ 1.39
LTBP3-201ENST00000301873 OTUD7BQ6GQQ9 843 aa23.73■■□□□ 1.39
LTBP3-201ENST00000301873 GSTTP1A0A1W2PQM5 241 aa23.72■■□□□ 1.39
LTBP3-201ENST00000301873 SPAG5Q96R06 1193 aa23.72■■□□□ 1.39
LTBP3-201ENST00000301873 B4E1Z4 1266 aa23.72■■□□□ 1.39
LTBP3-201ENST00000301873 MBD4O95243 580 aa23.72■■□□□ 1.39
LTBP3-201ENST00000301873 NAPAP54920 295 aa23.72■■□□□ 1.39
LTBP3-201ENST00000301873 ASIC1P78348 528 aa23.72■■□□□ 1.39
LTBP3-201ENST00000301873 TPTE2Q6XPS3 522 aa23.72■■□□□ 1.39
LTBP3-201ENST00000301873 ADAMTS12P58397 1594 aa23.72■■□□□ 1.39
LTBP3-201ENST00000301873 GTF2F1P35269 517 aaKnown RBP eCLIP23.72■■□□□ 1.391e-6■■■■□ 21.6
LTBP3-201ENST00000301873 CTNNBL1Q8WYA6 563 aaPredicted RBP23.72■■□□□ 1.39
LTBP3-201ENST00000301873 EDC3Q96F86 508 aaKnown RBP23.72■■□□□ 1.39
LTBP3-201ENST00000301873 CTTNBP2Q8WZ74 1663 aa23.72■■□□□ 1.39
LTBP3-201ENST00000301873 EDC4Q6P2E9 1401 aaKnown RBP23.72■■□□□ 1.39
LTBP3-201ENST00000301873 SBNO1A3KN83 1393 aa23.71■■□□□ 1.39
LTBP3-201ENST00000301873 CETN1Q12798 172 aa23.71■■□□□ 1.39
LTBP3-201ENST00000301873 FAM114A1Q8IWE2 563 aa23.71■■□□□ 1.39
LTBP3-201ENST00000301873 DRC1Q96MC2 740 aa23.71■■□□□ 1.39
LTBP3-201ENST00000301873 BCCIPQ9P287 314 aaKnown RBP eCLIP23.71■■□□□ 1.39
LTBP3-201ENST00000301873 PSMA7O14818 248 aa23.71■■□□□ 1.39
LTBP3-201ENST00000301873 RPS6KB1P23443 525 aa23.71■■□□□ 1.39
LTBP3-201ENST00000301873 IFFO1Q0D2I5 559 aa23.71■■□□□ 1.39
LTBP3-201ENST00000301873 RMND1Q9NWS8 449 aa23.71■■□□□ 1.39
LTBP3-201ENST00000301873 SYCP3Q8IZU3 236 aa23.7■■□□□ 1.39
LTBP3-201ENST00000301873 PLBD2Q8NHP8 589 aa23.7■■□□□ 1.39
LTBP3-201ENST00000301873 SMARCC1Q92922 1105 aaPredicted RBP23.7■■□□□ 1.39
LTBP3-201ENST00000301873 ZBTB9Q96C00 473 aa23.7■■□□□ 1.39
LTBP3-201ENST00000301873 MMRN2Q9H8L6 949 aa23.7■■□□□ 1.39
LTBP3-201ENST00000301873 GSTO1P78417 241 aa23.7■■□□□ 1.38
LTBP3-201ENST00000301873 SPAG1Q07617 926 aa23.7■■□□□ 1.38
LTBP3-201ENST00000301873 ALS2CR12Q96Q35 445 aa23.7■■□□□ 1.38
LTBP3-201ENST00000301873 HOXB7P09629 217 aa23.7■■□□□ 1.38
LTBP3-201ENST00000301873 DYDC1Q8WWB3 177 aa23.7■■□□□ 1.38
LTBP3-201ENST00000301873 C8orf37Q96NL8 207 aa23.7■■□□□ 1.38
LTBP3-201ENST00000301873 PLCD4Q9BRC7 762 aa23.7■■□□□ 1.38
LTBP3-201ENST00000301873 USP44Q9H0E7 712 aa23.7■■□□□ 1.38
LTBP3-201ENST00000301873 GOPCQ9HD26 462 aa23.7■■□□□ 1.38
LTBP3-201ENST00000301873 DNMT1P26358 1616 aaKnown RBP23.7■■□□□ 1.38
LTBP3-201ENST00000301873 SCLT1Q96NL6 688 aa23.69■■□□□ 1.38
LTBP3-201ENST00000301873 CFAP65Q6ZU64 1925 aaKnown RBP23.69■■□□□ 1.38
LTBP3-201ENST00000301873 GOLGA6L7A0A1B0GV03 622 aa23.69■■□□□ 1.38
LTBP3-201ENST00000301873 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.69■■□□□ 1.38
LTBP3-201ENST00000301873 ZMYM4Q5VZL5 1548 aa23.69■■□□□ 1.38
LTBP3-201ENST00000301873 BMS1Q14692 1282 aaKnown RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms