RNA–Protein interactions for RNA: ENST00000296799.8

ARHGEF28-202, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ARHGEF28, Length 4,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-202ENST00000296799 FAM227BQ96M60 508 aa17.44■□□□□ 0.38
ARHGEF28-202ENST00000296799 HELLSQ9NRZ9 838 aa17.44■□□□□ 0.38
ARHGEF28-202ENST00000296799 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.44■□□□□ 0.383e-8■■□□□ 13.6
ARHGEF28-202ENST00000296799 NDUFB9Q9Y6M9 179 aa17.44■□□□□ 0.38
ARHGEF28-202ENST00000296799 TTLL7Q6ZT98 887 aa17.43■□□□□ 0.38
ARHGEF28-202ENST00000296799 DENND2AQ9ULE3 1009 aa17.43■□□□□ 0.38
ARHGEF28-202ENST00000296799 ABCC3O15438 1527 aa17.43■□□□□ 0.38
ARHGEF28-202ENST00000296799 SGSM2O43147 1006 aa17.43■□□□□ 0.38
ARHGEF28-202ENST00000296799 ARHGAP29Q52LW3 1261 aa17.43■□□□□ 0.38
ARHGEF28-202ENST00000296799 CALML4Q96GE6 196 aa17.43■□□□□ 0.38
ARHGEF28-202ENST00000296799 KBTBD3Q8NAB2 608 aa17.43■□□□□ 0.38
ARHGEF28-202ENST00000296799 HIBADHP31937 336 aaKnown RBP17.42■□□□□ 0.38
ARHGEF28-202ENST00000296799 SYKP43405 635 aa17.42■□□□□ 0.38
ARHGEF28-202ENST00000296799 TNNT3P45378 269 aaPredicted RBP17.42■□□□□ 0.38
ARHGEF28-202ENST00000296799 USP48Q86UV5 1035 aa17.42■□□□□ 0.38
ARHGEF28-202ENST00000296799 KCNG4Q8TDN1 519 aa17.42■□□□□ 0.38
ARHGEF28-202ENST00000296799 TOP1P11387 765 aaKnown RBP17.42■□□□□ 0.38
ARHGEF28-202ENST00000296799 INTS4Q96HW7 963 aaKnown RBP17.42■□□□□ 0.38
ARHGEF28-202ENST00000296799 EYA3Q99504 573 aa17.42■□□□□ 0.38
ARHGEF28-202ENST00000296799 SEPT11Q9NVA2 429 aaKnown RBP17.42■□□□□ 0.38
ARHGEF28-202ENST00000296799 MATR3P43243 847 aaKnown RBP eCLIP17.42■□□□□ 0.388e-7■■■■□ 21.4
ARHGEF28-202ENST00000296799 TXLNBQ8N3L3 684 aa17.42■□□□□ 0.38
ARHGEF28-202ENST00000296799 SSH3Q8TE77 659 aa17.42■□□□□ 0.38
ARHGEF28-202ENST00000296799 APPBP2Q92624 585 aa17.42■□□□□ 0.38
ARHGEF28-202ENST00000296799 RXRAP19793 462 aa17.41■□□□□ 0.38
ARHGEF28-202ENST00000296799 HEATR3Q7Z4Q2 680 aa17.41■□□□□ 0.38
ARHGEF28-202ENST00000296799 LPIN2Q92539 896 aa17.41■□□□□ 0.38
ARHGEF28-202ENST00000296799 STX1AQ16623 288 aa17.41■□□□□ 0.38
ARHGEF28-202ENST00000296799 TRMT2AQ8IZ69 625 aaKnown RBP17.41■□□□□ 0.38
ARHGEF28-202ENST00000296799 CCDC148Q8NFR7 591 aa17.41■□□□□ 0.38
ARHGEF28-202ENST00000296799 CLIP2Q9UDT6 1046 aa17.41■□□□□ 0.38
ARHGEF28-202ENST00000296799 ARHGAP31Q2M1Z3 1444 aa17.41■□□□□ 0.38
ARHGEF28-202ENST00000296799 RTL1A6NKG5 1358 aa17.41■□□□□ 0.38
ARHGEF28-202ENST00000296799 AOX1Q06278 1338 aa17.41■□□□□ 0.38
ARHGEF28-202ENST00000296799 UFL1O94874 794 aa17.41■□□□□ 0.38
ARHGEF28-202ENST00000296799 NBPF14Q5TI25 921 aa17.41■□□□□ 0.38
ARHGEF28-202ENST00000296799 EHMT1Q9H9B1 1298 aa17.41■□□□□ 0.38
ARHGEF28-202ENST00000296799 PTPDC1A2A3K4 754 aa17.4■□□□□ 0.38
ARHGEF28-202ENST00000296799 MARCKSP29966 332 aaPredicted RBP17.4■□□□□ 0.38
ARHGEF28-202ENST00000296799 AMPD3Q01432 767 aa17.4■□□□□ 0.38
ARHGEF28-202ENST00000296799 BEND3Q5T5X7 828 aa17.4■□□□□ 0.38
ARHGEF28-202ENST00000296799 TSG101Q99816 390 aa17.4■□□□□ 0.38
ARHGEF28-202ENST00000296799 DACT1Q9NYF0 836 aa17.4■□□□□ 0.38
ARHGEF28-202ENST00000296799 FKBP15Q5T1M5 1219 aa17.4■□□□□ 0.38
ARHGEF28-202ENST00000296799 KANK3Q6NY19 840 aa17.4■□□□□ 0.38
ARHGEF28-202ENST00000296799 ZNF771Q7L3S4 317 aaPredicted RBP17.4■□□□□ 0.38
ARHGEF28-202ENST00000296799 ZNF397Q8NF99 534 aaPredicted RBP17.4■□□□□ 0.38
ARHGEF28-202ENST00000296799 CARD10Q9BWT7 1032 aa17.4■□□□□ 0.38
ARHGEF28-202ENST00000296799 ERBB3P21860 1342 aa17.4■□□□□ 0.38
ARHGEF28-202ENST00000296799 GPAA1O43292 621 aa17.39■□□□□ 0.38
ARHGEF28-202ENST00000296799 KIF20AO95235 890 aa17.39■□□□□ 0.38
ARHGEF28-202ENST00000296799 CCDC181Q5TID7 509 aa17.39■□□□□ 0.38
ARHGEF28-202ENST00000296799 JDP2Q8WYK2 163 aa17.39■□□□□ 0.38
ARHGEF28-202ENST00000296799 VEZTQ9HBM0 779 aa17.39■□□□□ 0.38
ARHGEF28-202ENST00000296799 WDHD1O75717 1129 aaPredicted RBP17.39■□□□□ 0.37
ARHGEF28-202ENST00000296799 BMP15O95972 392 aa17.39■□□□□ 0.37
ARHGEF28-202ENST00000296799 CHMP4BP1P59074 171 aa17.39■□□□□ 0.37
ARHGEF28-202ENST00000296799 ZSCAN23Q3MJ62 389 aa17.39■□□□□ 0.37
ARHGEF28-202ENST00000296799 ZKSCAN3Q9BRR0 538 aa17.39■□□□□ 0.37
ARHGEF28-202ENST00000296799 CALM1P0DP23 149 aa17.39■□□□□ 0.37
ARHGEF28-202ENST00000296799 CALM2P0DP24 149 aa17.39■□□□□ 0.37
ARHGEF28-202ENST00000296799 CALM3P0DP25 149 aa17.39■□□□□ 0.37
ARHGEF28-202ENST00000296799 CDR1P51861 262 aa17.39■□□□□ 0.37
ARHGEF28-202ENST00000296799 PPP4R3BQ5MIZ7 849 aa17.39■□□□□ 0.37
ARHGEF28-202ENST00000296799 ERCC4Q92889 916 aaPredicted RBP17.39■□□□□ 0.37
ARHGEF28-202ENST00000296799 RBM17Q96I25 401 aaKnown RBP17.39■□□□□ 0.37
ARHGEF28-202ENST00000296799 CAVIN2O95810 425 aa17.39■□□□□ 0.37
ARHGEF28-202ENST00000296799 KIAA1328Q86T90 577 aa17.39■□□□□ 0.37
ARHGEF28-202ENST00000296799 MRPS27Q92552 414 aaKnown RBP17.39■□□□□ 0.37
ARHGEF28-202ENST00000296799 SYT1P21579 422 aa17.38■□□□□ 0.37
ARHGEF28-202ENST00000296799 PYM1Q9BRP8 204 aaKnown RBP17.38■□□□□ 0.37
ARHGEF28-202ENST00000296799 ZNF521Q96K83 1311 aa17.38■□□□□ 0.37
ARHGEF28-202ENST00000296799 B4E1Z4 1266 aa17.38■□□□□ 0.37
ARHGEF28-202ENST00000296799 CDC42BPAQ5VT25 1732 aa17.38■□□□□ 0.37
ARHGEF28-202ENST00000296799 FGFR1OPO95684 399 aaKnown RBP17.38■□□□□ 0.37
ARHGEF28-202ENST00000296799 NAPAP54920 295 aa17.38■□□□□ 0.37
ARHGEF28-202ENST00000296799 CACNA2D4Q7Z3S7 1137 aa17.38■□□□□ 0.37
ARHGEF28-202ENST00000296799 CPLX3Q8WVH0 158 aa17.38■□□□□ 0.37
ARHGEF28-202ENST00000296799 EDC3Q96F86 508 aaKnown RBP17.38■□□□□ 0.37
ARHGEF28-202ENST00000296799 ASAP1Q9ULH1 1129 aa17.38■□□□□ 0.37
ARHGEF28-202ENST00000296799 KIF24Q5T7B8 1368 aa17.38■□□□□ 0.37
ARHGEF28-202ENST00000296799 ERBB4Q15303 1308 aa17.38■□□□□ 0.37
ARHGEF28-202ENST00000296799 TRIM75PA6NK02 468 aa17.37■□□□□ 0.37
ARHGEF28-202ENST00000296799 SLC27A2O14975 620 aa17.37■□□□□ 0.37
ARHGEF28-202ENST00000296799 POLD1P28340 1107 aa17.37■□□□□ 0.37
ARHGEF28-202ENST00000296799 KIF1BO60333 1816 aa17.37■□□□□ 0.37
ARHGEF28-202ENST00000296799 RDXP35241 583 aaKnown RBP17.37■□□□□ 0.37
ARHGEF28-202ENST00000296799 RAB3GAP1Q15042 981 aa17.37■□□□□ 0.37
ARHGEF28-202ENST00000296799 PROSER3Q2NL68 480 aa17.37■□□□□ 0.37
ARHGEF28-202ENST00000296799 EAF2Q96CJ1 260 aaPredicted RBP17.37■□□□□ 0.37
ARHGEF28-202ENST00000296799 ARMT1Q9H993 441 aa17.37■□□□□ 0.37
ARHGEF28-202ENST00000296799 TEX11Q8IYF3 940 aa17.37■□□□□ 0.37
ARHGEF28-202ENST00000296799 SAMM50Q9Y512 469 aa17.37■□□□□ 0.37
ARHGEF28-202ENST00000296799 SPTLC2O15270 562 aa17.37■□□□□ 0.37
ARHGEF28-202ENST00000296799 ZAP70P43403 619 aa17.37■□□□□ 0.37
ARHGEF28-202ENST00000296799 RBM26Q5T8P6 1007 aaKnown RBP17.37■□□□□ 0.37
ARHGEF28-202ENST00000296799 MYO6Q9UM54 1294 aa17.37■□□□□ 0.37
ARHGEF28-202ENST00000296799 TTC6Q86TZ1 520 aa17.36■□□□□ 0.37
ARHGEF28-202ENST00000296799 ARAP3Q8WWN8 1544 aa17.36■□□□□ 0.37
ARHGEF28-202ENST00000296799 SYNMO15061 1565 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms