RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 PTPRTO14522 1441 aa19.74■□□□□ 0.75
CDCP1-201ENST00000296129 CCDC150Q8NCX0 1101 aa19.74■□□□□ 0.75
CDCP1-201ENST00000296129 BABAM1Q9NWV8 329 aa19.74■□□□□ 0.75
CDCP1-201ENST00000296129 KDM5AP29375 1690 aaKnown RBP19.73■□□□□ 0.75
CDCP1-201ENST00000296129 USP19O94966 1318 aa19.73■□□□□ 0.75
CDCP1-201ENST00000296129 GNAQP50148 359 aa19.73■□□□□ 0.75
CDCP1-201ENST00000296129 NAPAP54920 295 aa19.73■□□□□ 0.75
CDCP1-201ENST00000296129 CHL1O00533 1208 aa19.73■□□□□ 0.75
CDCP1-201ENST00000296129 NEBLO76041 1014 aa19.73■□□□□ 0.75
CDCP1-201ENST00000296129 RAB3GAP1Q15042 981 aa19.73■□□□□ 0.75
CDCP1-201ENST00000296129 SYCP3Q8IZU3 236 aa19.73■□□□□ 0.75
CDCP1-201ENST00000296129 FAM89AQ96GI7 184 aa19.73■□□□□ 0.75
CDCP1-201ENST00000296129 MCM9Q9NXL9 1143 aa19.73■□□□□ 0.75
CDCP1-201ENST00000296129 PTPDC1A2A3K4 754 aa19.73■□□□□ 0.75
CDCP1-201ENST00000296129 SNW1Q13573 536 aaKnown RBP19.73■□□□□ 0.75
CDCP1-201ENST00000296129 LUZP1Q86V48 1076 aa19.73■□□□□ 0.75
CDCP1-201ENST00000296129 JAG2Q9Y219 1238 aa19.73■□□□□ 0.75
CDCP1-201ENST00000296129 DHX32Q7L7V1 743 aaKnown RBP19.72■□□□□ 0.75
CDCP1-201ENST00000296129 GBP2P32456 591 aaPredicted RBP19.72■□□□□ 0.75
CDCP1-201ENST00000296129 HSP90AA4PQ58FG1 418 aa19.72■□□□□ 0.75
CDCP1-201ENST00000296129 STXBP4Q6ZWJ1 553 aa19.72■□□□□ 0.75
CDCP1-201ENST00000296129 N4BP3O15049 544 aa19.72■□□□□ 0.75
CDCP1-201ENST00000296129 UBASH3AP57075 661 aa19.72■□□□□ 0.75
CDCP1-201ENST00000296129 RTL1A6NKG5 1358 aa19.72■□□□□ 0.75
CDCP1-201ENST00000296129 TBCAO75347 108 aaKnown RBP19.72■□□□□ 0.75
CDCP1-201ENST00000296129 RXRAP19793 462 aa19.72■□□□□ 0.75
CDCP1-201ENST00000296129 BLMP54132 1417 aaPredicted RBP19.72■□□□□ 0.75
CDCP1-201ENST00000296129 CETN1Q12798 172 aa19.71■□□□□ 0.75
CDCP1-201ENST00000296129 HELLSQ9NRZ9 838 aa19.71■□□□□ 0.75
CDCP1-201ENST00000296129 HDAC9Q9UKV0 1011 aa19.71■□□□□ 0.75
CDCP1-201ENST00000296129 ALS2CR12Q96Q35 445 aa19.71■□□□□ 0.75
CDCP1-201ENST00000296129 DNAJC25Q9H1X3 360 aa19.71■□□□□ 0.75
CDCP1-201ENST00000296129 NSFL1CQ9UNZ2 370 aaKnown RBP19.71■□□□□ 0.75
CDCP1-201ENST00000296129 CALM1P0DP23 149 aa19.71■□□□□ 0.75
CDCP1-201ENST00000296129 CALM2P0DP24 149 aa19.71■□□□□ 0.75
CDCP1-201ENST00000296129 CALM3P0DP25 149 aa19.71■□□□□ 0.75
CDCP1-201ENST00000296129 TNNI3KQ59H18 835 aa19.71■□□□□ 0.75
CDCP1-201ENST00000296129 KLHDC4Q8TBB5 520 aa19.71■□□□□ 0.75
CDCP1-201ENST00000296129 ANKRD2Q9GZV1 360 aa19.71■□□□□ 0.75
CDCP1-201ENST00000296129 SLC52A2Q9HAB3 445 aa19.71■□□□□ 0.75
CDCP1-201ENST00000296129 FPGT-TNNI3KV9GXZ4 949 aa19.71■□□□□ 0.75
CDCP1-201ENST00000296129 USP8P40818 1118 aa19.71■□□□□ 0.75
CDCP1-201ENST00000296129 CCDC129Q6ZRS4 1044 aa19.71■□□□□ 0.75
CDCP1-201ENST00000296129 SPTLC2O15270 562 aa19.71■□□□□ 0.75
CDCP1-201ENST00000296129 CPA1P15085 419 aa19.71■□□□□ 0.75
CDCP1-201ENST00000296129 MAP9Q49MG5 647 aa19.71■□□□□ 0.75
CDCP1-201ENST00000296129 PAFAH1B1P43034 410 aa19.7■□□□□ 0.74
CDCP1-201ENST00000296129 AOPEPQ8N6M6 819 aa19.7■□□□□ 0.74
CDCP1-201ENST00000296129 ZNF830Q96NB3 372 aaPredicted RBP19.7■□□□□ 0.74
CDCP1-201ENST00000296129 ITGA6P23229 1130 aa19.7■□□□□ 0.74
CDCP1-201ENST00000296129 ERMNQ8TAM6 284 aa19.7■□□□□ 0.74
CDCP1-201ENST00000296129 FAM200AQ8TCP9 573 aa19.7■□□□□ 0.74
CDCP1-201ENST00000296129 A0A1B0GUL7 405 aa19.7■□□□□ 0.74
CDCP1-201ENST00000296129 ARHGEF5Q12774 1597 aa19.7■□□□□ 0.74
CDCP1-201ENST00000296129 RIMBP2O15034 1052 aa19.7■□□□□ 0.74
CDCP1-201ENST00000296129 KRT2P35908 639 aa19.7■□□□□ 0.74
CDCP1-201ENST00000296129 ZRSR2Q15696 482 aaKnown RBP19.7■□□□□ 0.74
CDCP1-201ENST00000296129 ARHGEF10O15013 1369 aa19.69■□□□□ 0.74
CDCP1-201ENST00000296129 GNPATO15228 680 aa19.69■□□□□ 0.74
CDCP1-201ENST00000296129 HOXB7P09629 217 aa19.69■□□□□ 0.74
CDCP1-201ENST00000296129 TIMM10P62072 90 aa19.69■□□□□ 0.74
CDCP1-201ENST00000296129 PPP4R3BQ5MIZ7 849 aa19.69■□□□□ 0.74
CDCP1-201ENST00000296129 DHX58Q96C10 678 aa19.69■□□□□ 0.74
CDCP1-201ENST00000296129 DNAI2Q9GZS0 605 aa19.69■□□□□ 0.74
CDCP1-201ENST00000296129 ERICH4A6NGS2 130 aa19.69■□□□□ 0.74
CDCP1-201ENST00000296129 MMRN2Q9H8L6 949 aa19.69■□□□□ 0.74
CDCP1-201ENST00000296129 TFCP2L1Q9NZI6 479 aa19.69■□□□□ 0.74
CDCP1-201ENST00000296129 LMTK3Q96Q04 1460 aa19.69■□□□□ 0.74
CDCP1-201ENST00000296129 EYA2O00167 538 aa19.69■□□□□ 0.74
CDCP1-201ENST00000296129 MBD4O95243 580 aa19.69■□□□□ 0.74
CDCP1-201ENST00000296129 MYO5CQ9NQX4 1742 aa19.69■□□□□ 0.74
CDCP1-201ENST00000296129 MCM3P25205 808 aa19.69■□□□□ 0.74
CDCP1-201ENST00000296129 ZFYVE16Q7Z3T8 1539 aa19.69■□□□□ 0.74
CDCP1-201ENST00000296129 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.68■□□□□ 0.74
CDCP1-201ENST00000296129 WDHD1O75717 1129 aaPredicted RBP19.68■□□□□ 0.74
CDCP1-201ENST00000296129 LDHBP07195 334 aaKnown RBP19.68■□□□□ 0.74
CDCP1-201ENST00000296129 TRIM75PA6NK02 468 aa19.68■□□□□ 0.74
CDCP1-201ENST00000296129 CGNQ9P2M7 1197 aaKnown RBP19.68■□□□□ 0.74
CDCP1-201ENST00000296129 GOLGA6L9A6NEM1 432 aa19.68■□□□□ 0.74
CDCP1-201ENST00000296129 CEP135Q66GS9 1140 aa19.68■□□□□ 0.74
CDCP1-201ENST00000296129 DDX17Q92841 729 aaKnown RBP19.68■□□□□ 0.74
CDCP1-201ENST00000296129 ZKSCAN3Q9BRR0 538 aa19.68■□□□□ 0.74
CDCP1-201ENST00000296129 CTNNBL1Q8WYA6 563 aaPredicted RBP19.68■□□□□ 0.74
CDCP1-201ENST00000296129 GOPCQ9HD26 462 aa19.68■□□□□ 0.74
CDCP1-201ENST00000296129 RRP36Q96EU6 259 aaKnown RBP19.67■□□□□ 0.74
CDCP1-201ENST00000296129 INTS4Q96HW7 963 aaKnown RBP19.67■□□□□ 0.74
CDCP1-201ENST00000296129 ZC3H12CQ9C0D7 883 aaKnown RBP19.67■□□□□ 0.74
CDCP1-201ENST00000296129 C6orf50Q9HD87 102 aa19.67■□□□□ 0.74
CDCP1-201ENST00000296129 PARP3Q9Y6F1 533 aa19.67■□□□□ 0.74
CDCP1-201ENST00000296129 TMCO5BA8MYB1 307 aa19.67■□□□□ 0.74
CDCP1-201ENST00000296129 RRP9O43818 475 aaKnown RBP19.67■□□□□ 0.74
CDCP1-201ENST00000296129 ZNF594Q96JF6 807 aaPredicted RBP19.67■□□□□ 0.74
CDCP1-201ENST00000296129 OGFOD1Q8N543 542 aa19.67■□□□□ 0.74
CDCP1-201ENST00000296129 SUCLG2Q96I99 432 aa19.67■□□□□ 0.74
CDCP1-201ENST00000296129 DBNDD2Q9BQY9 259 aa19.67■□□□□ 0.74
CDCP1-201ENST00000296129 CTAGE1Q96RT6 745 aa19.66■□□□□ 0.74
CDCP1-201ENST00000296129 CFAP65Q6ZU64 1925 aaKnown RBP19.66■□□□□ 0.74
CDCP1-201ENST00000296129 TMEM2Q9UHN6 1383 aa19.66■□□□□ 0.74
CDCP1-201ENST00000296129 MYCNP04198 464 aaPredicted RBP19.66■□□□□ 0.74
CDCP1-201ENST00000296129 PLCG2P16885 1265 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms