RNA–Protein interactions for RNA: ENST00000290399.10

SIM2-201, Transcript of SIM bHLH transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM2, Length 4,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM2-201ENST00000290399 CPLX3Q8WVH0 158 aa21.08■□□□□ 0.97
SIM2-201ENST00000290399 SPHKAPQ2M3C7 1700 aa21.08■□□□□ 0.97
SIM2-201ENST00000290399 CDK12Q9NYV4 1490 aaPredicted RBP21.08■□□□□ 0.97
SIM2-201ENST00000290399 KIF2AO00139 706 aaPredicted RBP21.08■□□□□ 0.97
SIM2-201ENST00000290399 NOM1Q5C9Z4 860 aaKnown RBP21.08■□□□□ 0.97
SIM2-201ENST00000290399 XAGE2Q96GT9 111 aa21.08■□□□□ 0.97
SIM2-201ENST00000290399 KAT14Q9H8E8 782 aa21.08■□□□□ 0.97
SIM2-201ENST00000290399 VAT1LQ9HCJ6 419 aa21.08■□□□□ 0.97
SIM2-201ENST00000290399 CT47A1Q5JQC4 288 aaPredicted RBP21.08■□□□□ 0.96
SIM2-201ENST00000290399 MADDQ8WXG6 1647 aa21.07■□□□□ 0.96
SIM2-201ENST00000290399 CD2BP2O95400 341 aaKnown RBP21.07■□□□□ 0.96
SIM2-201ENST00000290399 NEMFO60524 1076 aa21.07■□□□□ 0.96
SIM2-201ENST00000290399 NCOA5Q9HCD5 579 aaKnown RBP21.07■□□□□ 0.96
SIM2-201ENST00000290399 GSDMDP57764 484 aa21.07■□□□□ 0.96
SIM2-201ENST00000290399 IFIT1BQ5T764 474 aaKnown RBP21.07■□□□□ 0.96
SIM2-201ENST00000290399 SPTY2D1Q68D10 685 aaPredicted RBP21.07■□□□□ 0.96
SIM2-201ENST00000290399 PTH1RQ03431 593 aa21.06■□□□□ 0.96
SIM2-201ENST00000290399 SLAIN2Q9P270 581 aa21.06■□□□□ 0.96
SIM2-201ENST00000290399 URI1O94763 535 aaPredicted RBP21.06■□□□□ 0.96
SIM2-201ENST00000290399 SH3TC1Q8TE82 1336 aa21.06■□□□□ 0.96
SIM2-201ENST00000290399 BRD1O95696 1058 aa21.05■□□□□ 0.96
SIM2-201ENST00000290399 HSP90AA4PQ58FG1 418 aa21.05■□□□□ 0.96
SIM2-201ENST00000290399 ZSCAN12O43309 604 aa21.05■□□□□ 0.96
SIM2-201ENST00000290399 ATP5JP18859 108 aa21.05■□□□□ 0.96
SIM2-201ENST00000290399 CCDC96Q2M329 555 aa21.05■□□□□ 0.96
SIM2-201ENST00000290399 A2ML1A8K2U0 1454 aa21.05■□□□□ 0.96
SIM2-201ENST00000290399 UBA7P41226 1012 aa21.05■□□□□ 0.96
SIM2-201ENST00000290399 C8orf37Q96NL8 207 aa21.05■□□□□ 0.96
SIM2-201ENST00000290399 KDRP35968 1356 aa21.05■□□□□ 0.96
SIM2-201ENST00000290399 ZNF76P36508 570 aa21.05■□□□□ 0.96
SIM2-201ENST00000290399 TTLL7Q6ZT98 887 aa21.05■□□□□ 0.96
SIM2-201ENST00000290399 OSBPL3Q9H4L5 887 aa21.05■□□□□ 0.96
SIM2-201ENST00000290399 GADD45BO75293 160 aaPredicted RBP21.04■□□□□ 0.96
SIM2-201ENST00000290399 NOLC1Q14978 699 aaKnown RBP eCLIP21.04■□□□□ 0.96
SIM2-201ENST00000290399 AOPEPQ8N6M6 819 aa21.04■□□□□ 0.96
SIM2-201ENST00000290399 STAP2Q9UGK3 403 aa21.04■□□□□ 0.96
SIM2-201ENST00000290399 A0A0D9SFI3 127 aa21.04■□□□□ 0.96
SIM2-201ENST00000290399 PRAMEF22A3QJZ6 481 aa21.04■□□□□ 0.96
SIM2-201ENST00000290399 MBD4O95243 580 aa21.04■□□□□ 0.96
SIM2-201ENST00000290399 SLF2Q8IX21 1173 aa21.04■□□□□ 0.96
SIM2-201ENST00000290399 APPBP2Q92624 585 aa21.04■□□□□ 0.96
SIM2-201ENST00000290399 ZNF219Q9P2Y4 722 aaPredicted RBP21.04■□□□□ 0.96
SIM2-201ENST00000290399 ERCC4Q92889 916 aaPredicted RBP21.04■□□□□ 0.96
SIM2-201ENST00000290399 TM6SF1Q9BZW5 370 aa21.03■□□□□ 0.96
SIM2-201ENST00000290399 TMOD2Q9NZR1 351 aa21.03■□□□□ 0.96
SIM2-201ENST00000290399 E9PCH4 1651 aa21.03■□□□□ 0.96
SIM2-201ENST00000290399 MAGEB6P1A0A0J9YX57 407 aa21.03■□□□□ 0.96
SIM2-201ENST00000290399 GPAA1O43292 621 aa21.03■□□□□ 0.96
SIM2-201ENST00000290399 LUZP1Q86V48 1076 aa21.03■□□□□ 0.96
SIM2-201ENST00000290399 CHAMP1Q96JM3 812 aa21.03■□□□□ 0.96
SIM2-201ENST00000290399 LUC7LQ9NQ29 371 aaKnown RBP21.03■□□□□ 0.96
SIM2-201ENST00000290399 B4E1Z4 1266 aa21.02■□□□□ 0.96
SIM2-201ENST00000290399 GLI2P10070 1586 aa21.02■□□□□ 0.96
SIM2-201ENST00000290399 ZKSCAN3Q9BRR0 538 aa21.02■□□□□ 0.96
SIM2-201ENST00000290399 TMEM63CQ9P1W3 806 aa21.02■□□□□ 0.96
SIM2-201ENST00000290399 ZNF445P59923 1031 aa21.02■□□□□ 0.95
SIM2-201ENST00000290399 TOM1O60784 492 aa21.01■□□□□ 0.95
SIM2-201ENST00000290399 LMOD1P29536 600 aaPredicted RBP21.01■□□□□ 0.95
SIM2-201ENST00000290399 KANK3Q6NY19 840 aa21.01■□□□□ 0.95
SIM2-201ENST00000290399 TPTE2Q6XPS3 522 aa21.01■□□□□ 0.95
SIM2-201ENST00000290399 JAK2O60674 1132 aa21.01■□□□□ 0.95
SIM2-201ENST00000290399 GNAT2P19087 354 aa21.01■□□□□ 0.95
SIM2-201ENST00000290399 AFMP43652 599 aa21.01■□□□□ 0.95
SIM2-201ENST00000290399 KIAA1328Q86T90 577 aa21.01■□□□□ 0.95
SIM2-201ENST00000290399 TCP11L1Q9NUJ3 509 aa21.01■□□□□ 0.95
SIM2-201ENST00000290399 ME3Q16798 604 aa21.01■□□□□ 0.95
SIM2-201ENST00000290399 SEC62Q99442 399 aaKnown RBP21.01■□□□□ 0.95
SIM2-201ENST00000290399 UBAP1LF5GYI3 381 aa21■□□□□ 0.95
SIM2-201ENST00000290399 PDE8AO60658 829 aa21■□□□□ 0.95
SIM2-201ENST00000290399 SKILP12757 684 aa21■□□□□ 0.95
SIM2-201ENST00000290399 JAG2Q9Y219 1238 aa21■□□□□ 0.95
SIM2-201ENST00000290399 A0A1B0GVL5 298 aa21■□□□□ 0.95
SIM2-201ENST00000290399 ERVV-2B6SEH9 535 aa21■□□□□ 0.95
SIM2-201ENST00000290399 UBASH3AP57075 661 aa21■□□□□ 0.95
SIM2-201ENST00000290399 TCIRG1Q13488 830 aa21■□□□□ 0.95
SIM2-201ENST00000290399 OTUD7BQ6GQQ9 843 aa21■□□□□ 0.95
SIM2-201ENST00000290399 RASEFQ8IZ41 740 aa21■□□□□ 0.95
SIM2-201ENST00000290399 RAB34Q9BZG1 259 aa21■□□□□ 0.95
SIM2-201ENST00000290399 ZAP70P43403 619 aa21■□□□□ 0.95
SIM2-201ENST00000290399 IDEP14735 1019 aa20.99■□□□□ 0.95
SIM2-201ENST00000290399 HS1BP3Q53T59 392 aa20.99■□□□□ 0.95
SIM2-201ENST00000290399 CDC37L1Q7L3B6 337 aa20.99■□□□□ 0.95
SIM2-201ENST00000290399 ANTXR1Q9H6X2 564 aa20.99■□□□□ 0.95
SIM2-201ENST00000290399 ABCA6Q8N139 1617 aa20.99■□□□□ 0.95
SIM2-201ENST00000290399 PUM3Q15397 648 aaKnown RBP20.99■□□□□ 0.95
SIM2-201ENST00000290399 ZFYVE27Q5T4F4 411 aa20.99■□□□□ 0.95
SIM2-201ENST00000290399 CCDC181Q5TID7 509 aa20.99■□□□□ 0.95
SIM2-201ENST00000290399 BRAPQ7Z569 592 aa20.99■□□□□ 0.95
SIM2-201ENST00000290399 SSH2Q76I76 1423 aa20.99■□□□□ 0.95
SIM2-201ENST00000290399 TAF5LO75529 589 aa20.98■□□□□ 0.95
SIM2-201ENST00000290399 SF3B2Q13435 895 aaKnown RBP20.98■□□□□ 0.95
SIM2-201ENST00000290399 TRIM75PA6NK02 468 aa20.98■□□□□ 0.95
SIM2-201ENST00000290399 TSPY3P0CV98 308 aa20.98■□□□□ 0.95
SIM2-201ENST00000290399 TSPY8P0CW00 308 aa20.98■□□□□ 0.95
SIM2-201ENST00000290399 RRAGDQ9NQL2 400 aaPredicted RBP20.98■□□□□ 0.95
SIM2-201ENST00000290399 PTCH1Q13635 1447 aa20.98■□□□□ 0.95
SIM2-201ENST00000290399 KIF4BQ2VIQ3 1234 aa20.98■□□□□ 0.95
SIM2-201ENST00000290399 CCDC12Q8WUD4 166 aaPredicted RBP20.98■□□□□ 0.95
SIM2-201ENST00000290399 NSFL1CQ9UNZ2 370 aaKnown RBP20.98■□□□□ 0.95
SIM2-201ENST00000290399 TMEM94Q12767 1356 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms