RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 GGA3Q9NZ52 723 aa19.41■□□□□ 0.7
PDE6D-201ENST00000287600 IGKV5-2P06315 115 aa19.4■□□□□ 0.7
PDE6D-201ENST00000287600 NOGQ13253 232 aa19.4■□□□□ 0.7
PDE6D-201ENST00000287600 SULF1Q8IWU6 871 aa19.4■□□□□ 0.7
PDE6D-201ENST00000287600 GBA2Q9HCG7 927 aaPredicted RBP19.4■□□□□ 0.7
PDE6D-201ENST00000287600 ZNF609O15014 1411 aa19.4■□□□□ 0.7
PDE6D-201ENST00000287600 ATP2B4P23634 1241 aa19.39■□□□□ 0.69
PDE6D-201ENST00000287600 HNRNPUQ00839 825 aaKnown RBP eCLIP19.39■□□□□ 0.69
PDE6D-201ENST00000287600 CWF19L2Q2TBE0 894 aaKnown RBP19.39■□□□□ 0.69
PDE6D-201ENST00000287600 RSBN1LQ6PCB5 846 aaPredicted RBP19.39■□□□□ 0.69
PDE6D-201ENST00000287600 C2orf69Q8N8R5 385 aa19.39■□□□□ 0.69
PDE6D-201ENST00000287600 FLIIQ13045 1269 aa19.38■□□□□ 0.69
PDE6D-201ENST00000287600 RGMBQ6NW40 437 aa19.38■□□□□ 0.69
PDE6D-201ENST00000287600 AGBL3Q8NEM8 1001 aa19.38■□□□□ 0.69
PDE6D-201ENST00000287600 MED23Q9ULK4 1368 aa19.37■□□□□ 0.69
PDE6D-201ENST00000287600 ASTN2O75129 1339 aaPredicted RBP19.37■□□□□ 0.69
PDE6D-201ENST00000287600 NEURL1BA8MQ27 555 aa19.37■□□□□ 0.69
PDE6D-201ENST00000287600 TTLL11Q8NHH1 800 aa19.37■□□□□ 0.69
PDE6D-201ENST00000287600 GREM2Q9H772 168 aa19.37■□□□□ 0.69
PDE6D-201ENST00000287600 ZNF280AP59817 542 aaPredicted RBP19.36■□□□□ 0.69
PDE6D-201ENST00000287600 FKBP5Q13451 457 aaPredicted RBP19.36■□□□□ 0.69
PDE6D-201ENST00000287600 ANGEL2Q5VTE6 544 aaKnown RBP19.36■□□□□ 0.69
PDE6D-201ENST00000287600 UBE3BQ7Z3V4 1068 aa19.36■□□□□ 0.69
PDE6D-201ENST00000287600 TRMT2AQ8IZ69 625 aaKnown RBP19.36■□□□□ 0.69
PDE6D-201ENST00000287600 USP17L3A6NCW0 530 aa19.35■□□□□ 0.69
PDE6D-201ENST00000287600 USP17L4A6NCW7 530 aa19.35■□□□□ 0.69
PDE6D-201ENST00000287600 USP17L8P0C7I0 530 aa19.35■□□□□ 0.69
PDE6D-201ENST00000287600 USP17L1Q7RTZ2 530 aa19.35■□□□□ 0.69
PDE6D-201ENST00000287600 PODNQ7Z5L7 613 aa19.35■□□□□ 0.69
PDE6D-201ENST00000287600 CDCA5Q96FF9 252 aa19.35■□□□□ 0.69
PDE6D-201ENST00000287600 ZIC5Q96T25 663 aa19.35■□□□□ 0.69
PDE6D-201ENST00000287600 BSDC1Q9NW68 430 aaPredicted RBP19.35■□□□□ 0.69
PDE6D-201ENST00000287600 MINPP1Q9UNW1 487 aa19.35■□□□□ 0.69
PDE6D-201ENST00000287600 CASP8AP2Q9UKL3 1982 aa19.35■□□□□ 0.69
PDE6D-201ENST00000287600 IGHMBP2P38935 993 aaKnown RBP19.34■□□□□ 0.69
PDE6D-201ENST00000287600 ZNF157P51786 506 aaPredicted RBP19.34■□□□□ 0.69
PDE6D-201ENST00000287600 SCARF1Q14162 830 aa19.34■□□□□ 0.69
PDE6D-201ENST00000287600 FBXW7Q969H0 707 aa19.34■□□□□ 0.69
PDE6D-201ENST00000287600 CCDC102AQ96A19 550 aa19.34■□□□□ 0.69
PDE6D-201ENST00000287600 MYOZ2Q9NPC6 264 aa19.34■□□□□ 0.69
PDE6D-201ENST00000287600 ZNF646O15015 1829 aaPredicted RBP19.34■□□□□ 0.69
PDE6D-201ENST00000287600 CCDC85CA6NKD9 419 aa19.33■□□□□ 0.68
PDE6D-201ENST00000287600 FAM155AB1AL88 458 aaPredicted RBP19.33■□□□□ 0.68
PDE6D-201ENST00000287600 CCT4P50991 539 aaKnown RBP19.33■□□□□ 0.68
PDE6D-201ENST00000287600 PAPPA2Q9BXP8 1791 aa19.33■□□□□ 0.68
PDE6D-201ENST00000287600 CACNA1FO60840 1977 aa19.33■□□□□ 0.68
PDE6D-201ENST00000287600 WTIPA6NIX2 430 aaPredicted RBP19.32■□□□□ 0.68
PDE6D-201ENST00000287600 GMLQ99445 158 aa19.32■□□□□ 0.68
PDE6D-201ENST00000287600 AKAP11Q9UKA4 1901 aa19.31■□□□□ 0.68
PDE6D-201ENST00000287600 H7C1W4 665 aa19.31■□□□□ 0.68
PDE6D-201ENST00000287600 GCKRQ14397 625 aa19.31■□□□□ 0.68
PDE6D-201ENST00000287600 FAM161AQ3B820 660 aa19.31■□□□□ 0.68
PDE6D-201ENST00000287600 DNAAF4Q8WXU2 420 aa19.31■□□□□ 0.68
PDE6D-201ENST00000287600 PITPNM2Q9BZ72 1349 aa19.3■□□□□ 0.68
PDE6D-201ENST00000287600 F6X3S4 739 aa19.3■□□□□ 0.68
PDE6D-201ENST00000287600 SLC10A3P09131 477 aa19.3■□□□□ 0.68
PDE6D-201ENST00000287600 ITGA6P23229 1130 aa19.3■□□□□ 0.68
PDE6D-201ENST00000287600 KIF23Q02241 960 aaPredicted RBP19.3■□□□□ 0.68
PDE6D-201ENST00000287600 MRPL50Q8N5N7 158 aaKnown RBP19.3■□□□□ 0.68
PDE6D-201ENST00000287600 SSH1Q8WYL5 1049 aa19.3■□□□□ 0.68
PDE6D-201ENST00000287600 PLA2G12BQ9BX93 195 aa19.3■□□□□ 0.68
PDE6D-201ENST00000287600 MCOLN1Q9GZU1 580 aa19.3■□□□□ 0.68
PDE6D-201ENST00000287600 COA1Q9GZY4 146 aa19.3■□□□□ 0.68
PDE6D-201ENST00000287600 MYO3BQ8WXR4 1341 aa19.29■□□□□ 0.68
PDE6D-201ENST00000287600 DACT2Q5SW24 774 aa19.29■□□□□ 0.68
PDE6D-201ENST00000287600 OGFOD1Q8N543 542 aa19.29■□□□□ 0.68
PDE6D-201ENST00000287600 MPHOSPH8Q99549 860 aa19.29■□□□□ 0.68
PDE6D-201ENST00000287600 MXD3Q9BW11 206 aa19.29■□□□□ 0.68
PDE6D-201ENST00000287600 SAGE1Q9NXZ1 904 aa19.29■□□□□ 0.68
PDE6D-201ENST00000287600 LEMD3Q9Y2U8 911 aa19.29■□□□□ 0.68
PDE6D-201ENST00000287600 ZNF804BA4D1E1 1349 aa19.28■□□□□ 0.68
PDE6D-201ENST00000287600 FKBP1BP68106 108 aa19.28■□□□□ 0.68
PDE6D-201ENST00000287600 DGKZQ13574 1117 aa19.28■□□□□ 0.68
PDE6D-201ENST00000287600 LINS1Q8NG48 757 aa19.28■□□□□ 0.68
PDE6D-201ENST00000287600 ANKRD2Q9GZV1 360 aa19.28■□□□□ 0.68
PDE6D-201ENST00000287600 SCAF8Q9UPN6 1271 aaKnown RBP19.28■□□□□ 0.68
PDE6D-201ENST00000287600 A0A1B0GUL6 1792 aa19.27■□□□□ 0.68
PDE6D-201ENST00000287600 CT47B1P0C2W7 299 aaPredicted RBP19.27■□□□□ 0.68
PDE6D-201ENST00000287600 KCNJ4P48050 445 aa19.27■□□□□ 0.68
PDE6D-201ENST00000287600 STRIP1Q5VSL9 837 aa19.27■□□□□ 0.68
PDE6D-201ENST00000287600 TXNRD3Q86VQ6 643 aa19.27■□□□□ 0.68
PDE6D-201ENST00000287600 RASAL3Q86YV0 1011 aa19.27■□□□□ 0.68
PDE6D-201ENST00000287600 KLRK1P26718 216 aa19.26■□□□□ 0.67
PDE6D-201ENST00000287600 CASP7P55210 303 aa19.26■□□□□ 0.67
PDE6D-201ENST00000287600 NBPF9Q3BBW0 867 aa19.26■□□□□ 0.67
PDE6D-201ENST00000287600 ALDH1L2Q3SY69 923 aa19.26■□□□□ 0.67
PDE6D-201ENST00000287600 SMC4Q9NTJ3 1288 aa19.26■□□□□ 0.67
PDE6D-201ENST00000287600 ANKRD18BA2A2Z9 1011 aa19.25■□□□□ 0.67
PDE6D-201ENST00000287600 TRPA1O75762 1119 aa19.25■□□□□ 0.67
PDE6D-201ENST00000287600 CSF1RP07333 972 aa19.25■□□□□ 0.67
PDE6D-201ENST00000287600 RNF186Q9NXI6 227 aa19.25■□□□□ 0.67
PDE6D-201ENST00000287600 CHMP3Q9Y3E7 222 aa19.25■□□□□ 0.67
PDE6D-201ENST00000287600 WNT10BO00744 389 aa19.24■□□□□ 0.67
PDE6D-201ENST00000287600 SASH1O94885 1247 aa19.24■□□□□ 0.67
PDE6D-201ENST00000287600 CHRNDQ07001 517 aa19.24■□□□□ 0.67
PDE6D-201ENST00000287600 TTLL12Q14166 644 aaPredicted RBP19.24■□□□□ 0.67
PDE6D-201ENST00000287600 BEND3Q5T5X7 828 aa19.24■□□□□ 0.67
PDE6D-201ENST00000287600 PRAMEF18Q5VWM3 479 aa19.24■□□□□ 0.67
PDE6D-201ENST00000287600 SLC4A10Q6U841 1118 aa19.24■□□□□ 0.67
PDE6D-201ENST00000287600 ZBED9Q6R2W3 1325 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms