RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 ZBTB7BO15156 539 aaPredicted RBP18.72■□□□□ 0.59
SH3RF1-201ENST00000284637 KIAA0753Q2KHM9 967 aa18.72■□□□□ 0.59
SH3RF1-201ENST00000284637 SLC9C2Q5TAH2 1124 aa18.72■□□□□ 0.59
SH3RF1-201ENST00000284637 GUCA1BQ9UMX6 200 aa18.72■□□□□ 0.59
SH3RF1-201ENST00000284637 PRAG1Q86YV5 1406 aa18.72■□□□□ 0.59
SH3RF1-201ENST00000284637 ANKRD24Q8TF21 1146 aa18.72■□□□□ 0.59
SH3RF1-201ENST00000284637 KRT23Q9C075 422 aa18.72■□□□□ 0.59
SH3RF1-201ENST00000284637 TTC41PQ6P2S7 1318 aa18.71■□□□□ 0.59
SH3RF1-201ENST00000284637 CD109Q6YHK3 1445 aa18.71■□□□□ 0.59
SH3RF1-201ENST00000284637 ATP2B3Q16720 1220 aa18.71■□□□□ 0.59
SH3RF1-201ENST00000284637 ZNF569Q5MCW4 686 aa18.71■□□□□ 0.59
SH3RF1-201ENST00000284637 GIGYF2Q6Y7W6 1299 aaKnown RBP18.71■□□□□ 0.59
SH3RF1-201ENST00000284637 HDXQ7Z353 690 aa18.71■□□□□ 0.59
SH3RF1-201ENST00000284637 PSMA7O14818 248 aa18.71■□□□□ 0.59
SH3RF1-201ENST00000284637 UQCRFS1P1P0C7P4 283 aa18.71■□□□□ 0.59
SH3RF1-201ENST00000284637 SARNPP82979 210 aaKnown RBP18.71■□□□□ 0.59
SH3RF1-201ENST00000284637 MTHFSDQ2M296 383 aaKnown RBP18.71■□□□□ 0.59
SH3RF1-201ENST00000284637 A0A1B0GVL5 298 aa18.7■□□□□ 0.58
SH3RF1-201ENST00000284637 PER1O15534 1290 aaPredicted RBP18.7■□□□□ 0.58
SH3RF1-201ENST00000284637 OPA1O60313 960 aa18.7■□□□□ 0.58
SH3RF1-201ENST00000284637 BMP15O95972 392 aa18.7■□□□□ 0.58
SH3RF1-201ENST00000284637 ELF2Q15723 593 aa18.7■□□□□ 0.58
SH3RF1-201ENST00000284637 CWF19L2Q2TBE0 894 aaKnown RBP18.7■□□□□ 0.58
SH3RF1-201ENST00000284637 PAG1Q9NWQ8 432 aa18.7■□□□□ 0.58
SH3RF1-201ENST00000284637 SLC4A4Q9Y6R1 1079 aa18.7■□□□□ 0.58
SH3RF1-201ENST00000284637 IFIT1BQ5T764 474 aaKnown RBP18.7■□□□□ 0.58
SH3RF1-201ENST00000284637 FAM173BQ6P4H8 233 aa18.7■□□□□ 0.58
SH3RF1-201ENST00000284637 TACC1O75410 805 aa18.7■□□□□ 0.58
SH3RF1-201ENST00000284637 TRIM75PA6NK02 468 aa18.7■□□□□ 0.58
SH3RF1-201ENST00000284637 DTNBO60941 627 aa18.69■□□□□ 0.58
SH3RF1-201ENST00000284637 PIP4K2BP78356 416 aa18.69■□□□□ 0.58
SH3RF1-201ENST00000284637 ESR2Q92731 530 aa18.69■□□□□ 0.58
SH3RF1-201ENST00000284637 EVCP57679 992 aa18.69■□□□□ 0.58
SH3RF1-201ENST00000284637 DNAJC21Q5F1R6 531 aaKnown RBP18.69■□□□□ 0.58
SH3RF1-201ENST00000284637 SYCP3Q8IZU3 236 aa18.69■□□□□ 0.58
SH3RF1-201ENST00000284637 TMTC2Q8N394 836 aa18.69■□□□□ 0.58
SH3RF1-201ENST00000284637 CYP7A1P22680 504 aa18.69■□□□□ 0.58
SH3RF1-201ENST00000284637 CEBPAP49715 358 aaPredicted RBP18.69■□□□□ 0.58
SH3RF1-201ENST00000284637 ASIC1P78348 528 aa18.69■□□□□ 0.58
SH3RF1-201ENST00000284637 ARID5AQ03989 594 aa18.69■□□□□ 0.58
SH3RF1-201ENST00000284637 KIF5AQ12840 1032 aa18.69■□□□□ 0.58
SH3RF1-201ENST00000284637 RXRAP19793 462 aa18.68■□□□□ 0.58
SH3RF1-201ENST00000284637 CDC5LQ99459 802 aaKnown RBP18.68■□□□□ 0.58
SH3RF1-201ENST00000284637 LMBRD1Q9NUN5 540 aa18.68■□□□□ 0.58
SH3RF1-201ENST00000284637 ZSCAN26Q16670 478 aa18.68■□□□□ 0.58
SH3RF1-201ENST00000284637 DHX32Q7L7V1 743 aaKnown RBP18.68■□□□□ 0.58
SH3RF1-201ENST00000284637 SOS1Q07889 1333 aaPredicted RBP18.68■□□□□ 0.58
SH3RF1-201ENST00000284637 IFI16Q16666 785 aaKnown RBP18.68■□□□□ 0.58
SH3RF1-201ENST00000284637 GAS2L3Q86XJ1 694 aa18.68■□□□□ 0.58
SH3RF1-201ENST00000284637 KRT86O43790 486 aa18.68■□□□□ 0.58
SH3RF1-201ENST00000284637 MAP2K2P36507 400 aa18.68■□□□□ 0.58
SH3RF1-201ENST00000284637 IL15P40933 162 aaPredicted RBP18.68■□□□□ 0.58
SH3RF1-201ENST00000284637 CNNM2Q9H8M5 875 aa18.67■□□□□ 0.58
SH3RF1-201ENST00000284637 CHRNA2Q15822 529 aa18.67■□□□□ 0.58
SH3RF1-201ENST00000284637 CCDC42Q96M95 316 aa18.67■□□□□ 0.58
SH3RF1-201ENST00000284637 THOC2Q8NI27 1593 aaKnown RBP18.67■□□□□ 0.58
SH3RF1-201ENST00000284637 BANK1Q8NDB2 785 aa18.67■□□□□ 0.58
SH3RF1-201ENST00000284637 RSRC1Q96IZ7 334 aaKnown RBP18.67■□□□□ 0.58
SH3RF1-201ENST00000284637 GPATCH8Q9UKJ3 1502 aaKnown RBP18.67■□□□□ 0.58
SH3RF1-201ENST00000284637 CCDC121Q6ZUS5 278 aa18.67■□□□□ 0.58
SH3RF1-201ENST00000284637 LINS1Q8NG48 757 aa18.67■□□□□ 0.58
SH3RF1-201ENST00000284637 CPSF2Q9P2I0 782 aaKnown RBP18.67■□□□□ 0.58
SH3RF1-201ENST00000284637 CCDC155Q8N6L0 562 aa18.66■□□□□ 0.58
SH3RF1-201ENST00000284637 ZEB2O60315 1214 aa18.66■□□□□ 0.58
SH3RF1-201ENST00000284637 BAG3O95817 575 aa18.66■□□□□ 0.58
SH3RF1-201ENST00000284637 KRT83P78385 493 aa18.66■□□□□ 0.58
SH3RF1-201ENST00000284637 HEATR3Q7Z4Q2 680 aa18.66■□□□□ 0.58
SH3RF1-201ENST00000284637 LRRC27Q9C0I9 530 aa18.66■□□□□ 0.58
SH3RF1-201ENST00000284637 C6orf229H3BNL8 230 aa18.66■□□□□ 0.58
SH3RF1-201ENST00000284637 UBXN1Q04323 297 aa18.66■□□□□ 0.58
SH3RF1-201ENST00000284637 KRT28Q7Z3Y7 464 aa18.66■□□□□ 0.58
SH3RF1-201ENST00000284637 KRI1Q8N9T8 703 aaKnown RBP18.66■□□□□ 0.58
SH3RF1-201ENST00000284637 CRNKL1Q9BZJ0 848 aaKnown RBP18.66■□□□□ 0.58
SH3RF1-201ENST00000284637 POTEDQ86YR6 584 aa18.66■□□□□ 0.58
SH3RF1-201ENST00000284637 RBM28Q9NW13 759 aaKnown RBP18.66■□□□□ 0.58
SH3RF1-201ENST00000284637 DMRT2Q9Y5R5 561 aa18.66■□□□□ 0.58
SH3RF1-201ENST00000284637 PIK3C2GO75747 1445 aa18.65■□□□□ 0.58
SH3RF1-201ENST00000284637 LDHCP07864 332 aa18.65■□□□□ 0.58
SH3RF1-201ENST00000284637 TBCAO75347 108 aaKnown RBP18.65■□□□□ 0.58
SH3RF1-201ENST00000284637 CUL7Q14999 1698 aa18.65■□□□□ 0.58
SH3RF1-201ENST00000284637 MSL1Q68DK7 614 aa18.65■□□□□ 0.58
SH3RF1-201ENST00000284637 PPP4R3AQ6IN85 833 aa18.65■□□□□ 0.58
SH3RF1-201ENST00000284637 MKRN1Q9UHC7 482 aaKnown RBP18.65■□□□□ 0.58
SH3RF1-201ENST00000284637 CHMP4BP1P59074 171 aa18.65■□□□□ 0.58
SH3RF1-201ENST00000284637 NAA25Q14CX7 972 aa18.65■□□□□ 0.58
SH3RF1-201ENST00000284637 SCLT1Q96NL6 688 aa18.65■□□□□ 0.58
SH3RF1-201ENST00000284637 TEX13AQ9BXU3 409 aaPredicted RBP18.65■□□□□ 0.58
SH3RF1-201ENST00000284637 CCDC114Q96M63 670 aa18.65■□□□□ 0.58
SH3RF1-201ENST00000284637 MSH6P52701 1360 aa18.65■□□□□ 0.58
SH3RF1-201ENST00000284637 RNF113AO15541 343 aaKnown RBP18.64■□□□□ 0.57
SH3RF1-201ENST00000284637 MYL5Q02045 173 aa18.64■□□□□ 0.57
SH3RF1-201ENST00000284637 FAM160A1Q05DH4 1040 aa18.64■□□□□ 0.57
SH3RF1-201ENST00000284637 TFCP2Q12800 502 aa18.64■□□□□ 0.57
SH3RF1-201ENST00000284637 G2E3Q7L622 706 aa18.64■□□□□ 0.57
SH3RF1-201ENST00000284637 SLF2Q8IX21 1173 aa18.64■□□□□ 0.57
SH3RF1-201ENST00000284637 BAG1Q99933 345 aaPredicted RBP18.64■□□□□ 0.57
SH3RF1-201ENST00000284637 GADD45BO75293 160 aaPredicted RBP18.64■□□□□ 0.57
SH3RF1-201ENST00000284637 PPP2R3AQ06190 1150 aa18.64■□□□□ 0.57
SH3RF1-201ENST00000284637 FBF1Q8TES7 1133 aa18.64■□□□□ 0.57
SH3RF1-201ENST00000284637 POGZQ7Z3K3 1410 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms