RNA–Protein interactions for RNA: ENST00000275575.11

PHTF2-202, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-202ENST00000275575 CNKSR1Q969H4 720 aa4.54□□□□□ -1.68
PHTF2-202ENST00000275575 BCS1LQ9Y276 419 aa4.54□□□□□ -1.68
PHTF2-202ENST00000275575 ROBO3Q96MS0 1386 aa4.54□□□□□ -1.68
PHTF2-202ENST00000275575 PARP10Q53GL7 1025 aa4.54□□□□□ -1.68
PHTF2-202ENST00000275575 CNBD1Q8NA66 436 aa4.54□□□□□ -1.68
PHTF2-202ENST00000275575 RBM42Q9BTD8 480 aaKnown RBP4.54□□□□□ -1.68
PHTF2-202ENST00000275575 TMEM88BA6NKF7 163 aa4.54□□□□□ -1.68
PHTF2-202ENST00000275575 CANXP27824 592 aaKnown RBP4.54□□□□□ -1.68
PHTF2-202ENST00000275575 MAP2K2P36507 400 aa4.54□□□□□ -1.68
PHTF2-202ENST00000275575 GCKRQ14397 625 aa4.54□□□□□ -1.68
PHTF2-202ENST00000275575 GREM2Q9H772 168 aa4.54□□□□□ -1.68
PHTF2-202ENST00000275575 ZNRF3Q9ULT6 936 aa4.54□□□□□ -1.68
PHTF2-202ENST00000275575 MICAL3Q7RTP6 2002 aa4.54□□□□□ -1.68
PHTF2-202ENST00000275575 COL4A3Q01955 1670 aa4.54□□□□□ -1.68
PHTF2-202ENST00000275575 BBOX1O75936 387 aa4.53□□□□□ -1.68
PHTF2-202ENST00000275575 STARD3NLO95772 234 aa4.53□□□□□ -1.68
PHTF2-202ENST00000275575 CNTROBQ8N137 903 aa4.53□□□□□ -1.68
PHTF2-202ENST00000275575 MXD3Q9BW11 206 aa4.53□□□□□ -1.68
PHTF2-202ENST00000275575 KDM2BQ8NHM5 1336 aa4.53□□□□□ -1.68
PHTF2-202ENST00000275575 PATJQ8NI35 1801 aa4.53□□□□□ -1.68
PHTF2-202ENST00000275575 WNT10BO00744 389 aa4.53□□□□□ -1.68
PHTF2-202ENST00000275575 MKRN4PQ13434 485 aaPredicted RBP4.53□□□□□ -1.68
PHTF2-202ENST00000275575 CC2D2BQ6DHV5 1058 aa4.53□□□□□ -1.68
PHTF2-202ENST00000275575 CCDC191Q8NCU4 936 aa4.53□□□□□ -1.68
PHTF2-202ENST00000275575 USP44Q9H0E7 712 aa4.53□□□□□ -1.68
PHTF2-202ENST00000275575 DNAJC18Q9H819 358 aa4.53□□□□□ -1.68
PHTF2-202ENST00000275575 ADARB2Q9NS39 739 aaKnown RBP4.53□□□□□ -1.68
PHTF2-202ENST00000275575 FNDC1Q4ZHG4 1894 aaPredicted RBP4.53□□□□□ -1.68
PHTF2-202ENST00000275575 MYH15Q9Y2K3 1946 aa4.53□□□□□ -1.68
PHTF2-202ENST00000275575 H0YIN7 160 aa4.53□□□□□ -1.68
PHTF2-202ENST00000275575 IGF2BP3O00425 579 aaKnown RBP eCLIP4.53□□□□□ -1.68
PHTF2-202ENST00000275575 USP2O75604 605 aaPredicted RBP4.53□□□□□ -1.68
PHTF2-202ENST00000275575 NKX2-3Q8TAU0 364 aa4.53□□□□□ -1.68
PHTF2-202ENST00000275575 GPR101Q96P66 508 aaPredicted RBP4.53□□□□□ -1.68
PHTF2-202ENST00000275575 ZBTB12Q9Y330 459 aaPredicted RBP4.53□□□□□ -1.68
PHTF2-202ENST00000275575 FANCMQ8IYD8 2048 aa4.53□□□□□ -1.68
PHTF2-202ENST00000275575 ZZEF1O43149 2961 aa4.53□□□□□ -1.68
PHTF2-202ENST00000275575 SENP3-EIF4A1A0A087X0R7 540 aa4.53□□□□□ -1.69
PHTF2-202ENST00000275575 GMPSP49915 693 aaPredicted RBP4.53□□□□□ -1.69
PHTF2-202ENST00000275575 POLA2Q14181 598 aa4.53□□□□□ -1.69
PHTF2-202ENST00000275575 APOBEC3HQ6NTF7 200 aaKnown RBP4.53□□□□□ -1.69
PHTF2-202ENST00000275575 ARMC5Q96C12 935 aa4.53□□□□□ -1.69
PHTF2-202ENST00000275575 TACC3Q9Y6A5 838 aa4.53□□□□□ -1.69
PHTF2-202ENST00000275575 ZBED9Q6R2W3 1325 aa4.52□□□□□ -1.69
PHTF2-202ENST00000275575 NIP7Q9Y221 180 aaKnown RBP eCLIP4.52□□□□□ -1.69
PHTF2-202ENST00000275575 MYH6P13533 1939 aa4.52□□□□□ -1.69
PHTF2-202ENST00000275575 NBPF19A0A087WUL8 3843 aa4.52□□□□□ -1.69
PHTF2-202ENST00000275575 SNAP23O00161 211 aa4.52□□□□□ -1.69
PHTF2-202ENST00000275575 CTSWP56202 376 aa4.52□□□□□ -1.69
PHTF2-202ENST00000275575 C1orf141Q5JVX7 400 aa4.52□□□□□ -1.69
PHTF2-202ENST00000275575 ARHGAP27Q6ZUM4 889 aa4.52□□□□□ -1.69
PHTF2-202ENST00000275575 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.52□□□□□ -1.69
PHTF2-202ENST00000275575 RHBDL3P58872 404 aa4.52□□□□□ -1.69
PHTF2-202ENST00000275575 SLFN5Q08AF3 891 aa4.52□□□□□ -1.69
PHTF2-202ENST00000275575 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.52□□□□□ -1.69
PHTF2-202ENST00000275575 WDR63Q8IWG1 891 aa4.52□□□□□ -1.69
PHTF2-202ENST00000275575 SIRT2Q8IXJ6 389 aa4.52□□□□□ -1.69
PHTF2-202ENST00000275575 AGBL3Q8NEM8 1001 aa4.52□□□□□ -1.69
PHTF2-202ENST00000275575 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.52□□□□□ -1.69
PHTF2-202ENST00000275575 RNF186Q9NXI6 227 aa4.52□□□□□ -1.69
PHTF2-202ENST00000275575 MYO16Q9Y6X6 1858 aa4.52□□□□□ -1.69
PHTF2-202ENST00000275575 RPS12P25398 132 aaKnown RBP4.51□□□□□ -1.69
PHTF2-202ENST00000275575 MMP14P50281 582 aa4.51□□□□□ -1.69
PHTF2-202ENST00000275575 NKX3-2P78367 333 aa4.51□□□□□ -1.69
PHTF2-202ENST00000275575 PTPN12Q05209 780 aaKnown RBP4.51□□□□□ -1.69
PHTF2-202ENST00000275575 RSBN1LQ6PCB5 846 aaPredicted RBP4.51□□□□□ -1.69
PHTF2-202ENST00000275575 SETDB2Q96T68 719 aa4.51□□□□□ -1.69
PHTF2-202ENST00000275575 KMT2BQ9UMN6 2715 aaPredicted RBP4.51□□□□□ -1.69
PHTF2-202ENST00000275575 SOGA3Q5TF21 947 aa4.51□□□□□ -1.69
PHTF2-202ENST00000275575 TMC4Q7Z404 712 aa4.51□□□□□ -1.69
PHTF2-202ENST00000275575 FAM163AQ96GL9 167 aaPredicted RBP4.51□□□□□ -1.69
PHTF2-202ENST00000275575 CRISPLD2Q9H0B8 497 aa4.51□□□□□ -1.69
PHTF2-202ENST00000275575 DAGLAQ9Y4D2 1042 aa4.51□□□□□ -1.69
PHTF2-202ENST00000275575 NBPF9Q3BBW0 867 aa4.51□□□□□ -1.69
PHTF2-202ENST00000275575 NOL9Q5SY16 702 aaKnown RBP4.51□□□□□ -1.69
PHTF2-202ENST00000275575 MAP1SQ66K74 1059 aaPredicted RBP4.51□□□□□ -1.69
PHTF2-202ENST00000275575 SIAH1Q8IUQ4 282 aa4.51□□□□□ -1.69
PHTF2-202ENST00000275575 FAM84BQ96KN1 310 aaPredicted RBP4.51□□□□□ -1.69
PHTF2-202ENST00000275575 PPP1R1BQ9UD71 204 aaPredicted RBP4.51□□□□□ -1.69
PHTF2-202ENST00000275575 XDHP47989 1333 aa4.51□□□□□ -1.69
PHTF2-202ENST00000275575 ZBTB7CA1YPR0 619 aa4.51□□□□□ -1.69
PHTF2-202ENST00000275575 ADM5C9JUS6 153 aa4.51□□□□□ -1.69
PHTF2-202ENST00000275575 HCLS1P14317 486 aaPredicted RBP4.51□□□□□ -1.69
PHTF2-202ENST00000275575 FAM89AQ96GI7 184 aa4.51□□□□□ -1.69
PHTF2-202ENST00000275575 FAM198AQ9UFP1 575 aa4.51□□□□□ -1.69
PHTF2-202ENST00000275575 KCNH4Q9UQ05 1017 aa4.51□□□□□ -1.69
PHTF2-202ENST00000275575 ECE2O60344 883 aa4.5□□□□□ -1.69
PHTF2-202ENST00000275575 ALDH1B1P30837 517 aa4.5□□□□□ -1.69
PHTF2-202ENST00000275575 RIPK4P57078 832 aa4.5□□□□□ -1.69
PHTF2-202ENST00000275575 KSR2Q6VAB6 950 aa4.5□□□□□ -1.69
PHTF2-202ENST00000275575 PCGF6Q9BYE7 350 aa4.5□□□□□ -1.69
PHTF2-202ENST00000275575 GLIS2Q9BZE0 524 aaPredicted RBP4.5□□□□□ -1.69
PHTF2-202ENST00000275575 HACL1Q9UJ83 578 aa4.5□□□□□ -1.69
PHTF2-202ENST00000275575 SNCAIPQ9Y6H5 919 aa4.5□□□□□ -1.69
PHTF2-202ENST00000275575 OBSL1O75147 1896 aa4.5□□□□□ -1.69
PHTF2-202ENST00000275575 NPM3O75607 178 aaKnown RBP4.5□□□□□ -1.69
PHTF2-202ENST00000275575 NBPF7P0C2Y1 421 aaPredicted RBP4.5□□□□□ -1.69
PHTF2-202ENST00000275575 MAP3K21Q5TCX8 1036 aa4.5□□□□□ -1.69
PHTF2-202ENST00000275575 TNNQ9UQP3 1299 aa4.5□□□□□ -1.69
PHTF2-202ENST00000275575 CNMDO75829 334 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms