RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 IP6K1Q92551 441 aa21.77■■□□□ 1.08
SSC4D-201ENST00000275560 MYD88Q99836 296 aa21.77■■□□□ 1.08
SSC4D-201ENST00000275560 MAPK8IP2Q13387 824 aaPredicted RBP21.77■■□□□ 1.08
SSC4D-201ENST00000275560 TNNI3KQ59H18 835 aa21.77■■□□□ 1.08
SSC4D-201ENST00000275560 U3KPZ7 1027 aaPredicted RBP21.77■■□□□ 1.08
SSC4D-201ENST00000275560 FPGT-TNNI3KV9GXZ4 949 aa21.77■■□□□ 1.08
SSC4D-201ENST00000275560 VGLL3A8MV65 326 aa21.76■■□□□ 1.07
SSC4D-201ENST00000275560 NAA16Q6N069 864 aaPredicted RBP21.76■■□□□ 1.07
SSC4D-201ENST00000275560 CLIC4Q9Y696 253 aa21.76■■□□□ 1.07
SSC4D-201ENST00000275560 MYH15Q9Y2K3 1946 aa21.76■■□□□ 1.07
SSC4D-201ENST00000275560 PDIA6Q15084 440 aa21.76■■□□□ 1.07
SSC4D-201ENST00000275560 MCMDC2Q4G0Z9 681 aa21.76■■□□□ 1.07
SSC4D-201ENST00000275560 ARHGAP29Q52LW3 1261 aa21.76■■□□□ 1.07
SSC4D-201ENST00000275560 FHOD1Q9Y613 1164 aa21.76■■□□□ 1.07
SSC4D-201ENST00000275560 OSBPL5Q9H0X9 879 aaPredicted RBP21.75■■□□□ 1.07
SSC4D-201ENST00000275560 EPC1Q9H2F5 836 aa21.75■■□□□ 1.07
SSC4D-201ENST00000275560 H2AFXP16104 143 aaPredicted RBP21.75■■□□□ 1.07
SSC4D-201ENST00000275560 ATP5JP18859 108 aa21.75■■□□□ 1.07
SSC4D-201ENST00000275560 TAF3Q5VWG9 929 aa21.75■■□□□ 1.07
SSC4D-201ENST00000275560 MRPS27Q92552 414 aaKnown RBP21.75■■□□□ 1.07
SSC4D-201ENST00000275560 LTN1O94822 1766 aa21.75■■□□□ 1.07
SSC4D-201ENST00000275560 UTYO14607 1347 aa21.75■■□□□ 1.07
SSC4D-201ENST00000275560 LMOD1P29536 600 aaPredicted RBP21.75■■□□□ 1.07
SSC4D-201ENST00000275560 GSDMDP57764 484 aa21.75■■□□□ 1.07
SSC4D-201ENST00000275560 C1orf141Q5JVX7 400 aa21.75■■□□□ 1.07
SSC4D-201ENST00000275560 DHX32Q7L7V1 743 aaKnown RBP21.75■■□□□ 1.07
SSC4D-201ENST00000275560 HOMER1Q86YM7 354 aa21.75■■□□□ 1.07
SSC4D-201ENST00000275560 ZNF396Q96N95 335 aaPredicted RBP21.75■■□□□ 1.07
SSC4D-201ENST00000275560 NEURL1BA8MQ27 555 aa21.74■■□□□ 1.07
SSC4D-201ENST00000275560 LAMA4Q16363 1823 aa21.74■■□□□ 1.07
SSC4D-201ENST00000275560 ATP1A3P13637 1013 aa21.74■■□□□ 1.07
SSC4D-201ENST00000275560 SFPQP23246 707 aaKnown RBP eCLIP21.74■■□□□ 1.07
SSC4D-201ENST00000275560 IRX5P78411 483 aaPredicted RBP21.74■■□□□ 1.07
SSC4D-201ENST00000275560 NOL10Q9BSC4 688 aaKnown RBP21.74■■□□□ 1.07
SSC4D-201ENST00000275560 NAT10Q9H0A0 1025 aaKnown RBP21.74■■□□□ 1.07
SSC4D-201ENST00000275560 L2HGDHQ9H9P8 463 aa21.74■■□□□ 1.07
SSC4D-201ENST00000275560 DNAI1Q9UI46 699 aa21.74■■□□□ 1.07
SSC4D-201ENST00000275560 HDAC5Q9UQL6 1122 aa21.74■■□□□ 1.07
SSC4D-201ENST00000275560 FANCGO15287 622 aa21.73■■□□□ 1.07
SSC4D-201ENST00000275560 KIAA1468Q9P260 1216 aa21.73■■□□□ 1.07
SSC4D-201ENST00000275560 FDPSP14324 419 aaKnown RBP21.73■■□□□ 1.07
SSC4D-201ENST00000275560 PTPN12Q05209 780 aaKnown RBP21.73■■□□□ 1.07
SSC4D-201ENST00000275560 GCKRQ14397 625 aa21.73■■□□□ 1.07
SSC4D-201ENST00000275560 PLEKHO1Q53GL0 409 aaPredicted RBP21.73■■□□□ 1.07
SSC4D-201ENST00000275560 CCDC93Q567U6 631 aa21.73■■□□□ 1.07
SSC4D-201ENST00000275560 TTLL5Q6EMB2 1281 aa21.73■■□□□ 1.07
SSC4D-201ENST00000275560 XAGE3Q8WTP9 111 aa21.73■■□□□ 1.07
SSC4D-201ENST00000275560 LLPHQ9BRT6 129 aaKnown RBP21.73■■□□□ 1.07
SSC4D-201ENST00000275560 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.73■■□□□ 1.07
SSC4D-201ENST00000275560 NEDD4P46934 1319 aa21.72■■□□□ 1.07
SSC4D-201ENST00000275560 DDX58O95786 925 aaKnown RBP21.72■■□□□ 1.07
SSC4D-201ENST00000275560 TMX1Q9H3N1 280 aa21.72■■□□□ 1.07
SSC4D-201ENST00000275560 EID1Q9Y6B2 187 aa21.72■■□□□ 1.07
SSC4D-201ENST00000275560 GOLIM4O00461 696 aa21.72■■□□□ 1.07
SSC4D-201ENST00000275560 POLR3GO15318 223 aaPredicted RBP21.72■■□□□ 1.07
SSC4D-201ENST00000275560 SEC31AO94979 1220 aaKnown RBP21.72■■□□□ 1.07
SSC4D-201ENST00000275560 KCNA6P17658 529 aa21.72■■□□□ 1.07
SSC4D-201ENST00000275560 PDIA3P30101 505 aaKnown RBP21.72■■□□□ 1.07
SSC4D-201ENST00000275560 SF3A1Q15459 793 aaKnown RBP21.72■■□□□ 1.07
SSC4D-201ENST00000275560 ZRSR1Q15695 479 aaKnown RBP21.72■■□□□ 1.07
SSC4D-201ENST00000275560 FAM177A1Q8N128 213 aaPredicted RBP21.72■■□□□ 1.07
SSC4D-201ENST00000275560 CHMP4AQ9BY43 222 aa21.72■■□□□ 1.07
SSC4D-201ENST00000275560 DDX21Q9NR30 783 aaKnown RBP eCLIP21.72■■□□□ 1.07
SSC4D-201ENST00000275560 PNMA6AP0CW24 399 aaPredicted RBP21.71■■□□□ 1.07
SSC4D-201ENST00000275560 PLA2G4AP47712 749 aa21.71■■□□□ 1.07
SSC4D-201ENST00000275560 COPS6Q7L5N1 327 aa21.71■■□□□ 1.07
SSC4D-201ENST00000275560 UBE3BQ7Z3V4 1068 aa21.71■■□□□ 1.07
SSC4D-201ENST00000275560 CARMIL3Q8ND23 1372 aa21.71■■□□□ 1.07
SSC4D-201ENST00000275560 CCDC66A2RUB6 948 aa21.7■■□□□ 1.07
SSC4D-201ENST00000275560 ATP5J2-PTCD1G3V325 749 aa21.7■■□□□ 1.07
SSC4D-201ENST00000275560 PTCD1O75127 700 aaKnown RBP21.7■■□□□ 1.07
SSC4D-201ENST00000275560 BMS1Q14692 1282 aaKnown RBP21.7■■□□□ 1.07
SSC4D-201ENST00000275560 STK38Q15208 465 aa21.7■■□□□ 1.07
SSC4D-201ENST00000275560 ZBTB9Q96C00 473 aa21.7■■□□□ 1.07
SSC4D-201ENST00000275560 SALL1Q9NSC2 1324 aa21.7■■□□□ 1.06
SSC4D-201ENST00000275560 E7EWF7 191 aa21.7■■□□□ 1.06
SSC4D-201ENST00000275560 RFX5P48382 616 aaPredicted RBP21.7■■□□□ 1.06
SSC4D-201ENST00000275560 EXOSC10Q01780 885 aaKnown RBP21.7■■□□□ 1.06
SSC4D-201ENST00000275560 DPF2Q92785 391 aa21.7■■□□□ 1.06
SSC4D-201ENST00000275560 NEUROD6Q96NK8 337 aa21.7■■□□□ 1.06
SSC4D-201ENST00000275560 KCND1Q9NSA2 647 aa21.7■■□□□ 1.06
SSC4D-201ENST00000275560 NCAPHQ15003 741 aa21.69■■□□□ 1.06
SSC4D-201ENST00000275560 ADALQ6DHV7 355 aa21.69■■□□□ 1.06
SSC4D-201ENST00000275560 LINC00301Q8NCQ3 95 aa21.69■■□□□ 1.06
SSC4D-201ENST00000275560 IMPACTQ9P2X3 320 aa21.69■■□□□ 1.06
SSC4D-201ENST00000275560 NEXNQ0ZGT2 675 aa21.69■■□□□ 1.06
SSC4D-201ENST00000275560 TIGD1Q96MW7 591 aa21.69■■□□□ 1.06
SSC4D-201ENST00000275560 HAUS7Q99871 368 aa21.69■■□□□ 1.06
SSC4D-201ENST00000275560 KIF2AO00139 706 aaPredicted RBP21.68■■□□□ 1.06
SSC4D-201ENST00000275560 HSP90AA4PQ58FG1 418 aa21.68■■□□□ 1.06
SSC4D-201ENST00000275560 CCDC150Q8NCX0 1101 aa21.68■■□□□ 1.06
SSC4D-201ENST00000275560 HAND2P61296 217 aa21.68■■□□□ 1.06
SSC4D-201ENST00000275560 NCAPD2Q15021 1401 aa21.68■■□□□ 1.06
SSC4D-201ENST00000275560 HEG1Q9ULI3 1381 aa21.67■■□□□ 1.06
SSC4D-201ENST00000275560 URI1O94763 535 aaPredicted RBP21.67■■□□□ 1.06
SSC4D-201ENST00000275560 SLC3A2P08195 630 aaKnown RBP21.67■■□□□ 1.06
SSC4D-201ENST00000275560 TIMM10P62072 90 aa21.67■■□□□ 1.06
SSC4D-201ENST00000275560 MARCKSP29966 332 aaPredicted RBP21.67■■□□□ 1.06
SSC4D-201ENST00000275560 FANCCQ00597 558 aa21.67■■□□□ 1.06
SSC4D-201ENST00000275560 CARD6Q9BX69 1037 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms