RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 TXNRD1Q16881 649 aa13.58□□□□□ -0.24
LRTM1-201ENST00000273286 NLRP2Q9NX02 1062 aa13.58□□□□□ -0.24
LRTM1-201ENST00000273286 STK32BQ9NY57 414 aa13.58□□□□□ -0.24
LRTM1-201ENST00000273286 NME9Q86XW9 330 aa13.57□□□□□ -0.24
LRTM1-201ENST00000273286 PHTF2Q8N3S3 785 aa13.57□□□□□ -0.24
LRTM1-201ENST00000273286 LTN1O94822 1766 aa13.57□□□□□ -0.24
LRTM1-201ENST00000273286 A0A1W2PP64 1363 aa13.57□□□□□ -0.24
LRTM1-201ENST00000273286 TSGA10IPQ3SY00 556 aa13.56□□□□□ -0.24
LRTM1-201ENST00000273286 RIPOR1Q6ZS17 1223 aa13.56□□□□□ -0.24
LRTM1-201ENST00000273286 CNKSR1Q969H4 720 aa13.56□□□□□ -0.24
LRTM1-201ENST00000273286 CASZ1Q86V15 1759 aa13.56□□□□□ -0.24
LRTM1-201ENST00000273286 NHSQ6T4R5 1651 aa13.56□□□□□ -0.24
LRTM1-201ENST00000273286 IL2RAP01589 272 aa13.56□□□□□ -0.24
LRTM1-201ENST00000273286 SLC15A2Q16348 729 aa13.56□□□□□ -0.24
LRTM1-201ENST00000273286 WASHC4Q2M389 1173 aa13.56□□□□□ -0.24
LRTM1-201ENST00000273286 NBPF10Q6P3W6 841 aaKnown RBP13.56□□□□□ -0.24
LRTM1-201ENST00000273286 NBPF15Q8N660 670 aa13.56□□□□□ -0.24
LRTM1-201ENST00000273286 ANKRD24Q8TF21 1146 aa13.56□□□□□ -0.24
LRTM1-201ENST00000273286 ZNF837Q96EG3 531 aaPredicted RBP13.56□□□□□ -0.24
LRTM1-201ENST00000273286 SLC12A5Q9H2X9 1139 aa13.56□□□□□ -0.24
LRTM1-201ENST00000273286 DYRK1BQ9Y463 629 aa13.56□□□□□ -0.24
LRTM1-201ENST00000273286 FAM208AQ9UK61 1670 aaKnown RBP13.55□□□□□ -0.24
LRTM1-201ENST00000273286 OXLD1Q5BKU9 147 aa13.55□□□□□ -0.24
LRTM1-201ENST00000273286 GAS2L1Q99501 681 aaPredicted RBP13.55□□□□□ -0.24
LRTM1-201ENST00000273286 ESYT1Q9BSJ8 1104 aa13.55□□□□□ -0.24
LRTM1-201ENST00000273286 SPATA31C2B4DYI2 1134 aa13.54□□□□□ -0.24
LRTM1-201ENST00000273286 PTF1AQ7RTS3 328 aa13.54□□□□□ -0.24
LRTM1-201ENST00000273286 TRIM22Q8IYM9 498 aa13.54□□□□□ -0.24
LRTM1-201ENST00000273286 IP6K1Q92551 441 aa13.54□□□□□ -0.24
LRTM1-201ENST00000273286 YY1P25490 414 aa13.53□□□□□ -0.24
LRTM1-201ENST00000273286 TAS1R3Q7RTX0 852 aa13.53□□□□□ -0.24
LRTM1-201ENST00000273286 COG3Q96JB2 828 aa13.53□□□□□ -0.24
LRTM1-201ENST00000273286 MTFR1LQ9H019 292 aa13.53□□□□□ -0.24
LRTM1-201ENST00000273286 CENPCQ03188 943 aa13.52□□□□□ -0.25
LRTM1-201ENST00000273286 USP4Q13107 963 aa13.52□□□□□ -0.25
LRTM1-201ENST00000273286 GMCL1Q96IK5 515 aa13.51□□□□□ -0.25
LRTM1-201ENST00000273286 TESK2Q96S53 571 aa13.51□□□□□ -0.25
LRTM1-201ENST00000273286 TIMMDC1Q9NPL8 285 aa13.51□□□□□ -0.25
LRTM1-201ENST00000273286 COG6Q9Y2V7 657 aa13.51□□□□□ -0.25
LRTM1-201ENST00000273286 ST20-MTHFSA0A0A6YYL1 179 aa13.5□□□□□ -0.25
LRTM1-201ENST00000273286 SEMA3FQ13275 785 aa13.5□□□□□ -0.25
LRTM1-201ENST00000273286 GAS6Q14393 721 aa13.5□□□□□ -0.25
LRTM1-201ENST00000273286 DBN1Q16643 649 aa13.5□□□□□ -0.25
LRTM1-201ENST00000273286 ZNF385CQ66K41 422 aaPredicted RBP13.5□□□□□ -0.25
LRTM1-201ENST00000273286 SVOPQ8N4V2 548 aa13.5□□□□□ -0.25
LRTM1-201ENST00000273286 RTL1A6NKG5 1358 aa13.5□□□□□ -0.25
LRTM1-201ENST00000273286 ANKRD36BQ8N2N9 1353 aa13.5□□□□□ -0.25
LRTM1-201ENST00000273286 GPR25O00155 361 aa13.49□□□□□ -0.25
LRTM1-201ENST00000273286 ZBTB7AO95365 584 aa13.49□□□□□ -0.25
LRTM1-201ENST00000273286 SLURP2P0DP57 97 aa13.49□□□□□ -0.25
LRTM1-201ENST00000273286 HMGB2P26583 209 aaKnown RBP13.49□□□□□ -0.25
LRTM1-201ENST00000273286 WDR44Q5JSH3 913 aa13.49□□□□□ -0.25
LRTM1-201ENST00000273286 ACSBG1Q96GR2 724 aa13.49□□□□□ -0.25
LRTM1-201ENST00000273286 ZSCAN10Q96SZ4 725 aaPredicted RBP13.49□□□□□ -0.25
LRTM1-201ENST00000273286 STAU1O95793 577 aaKnown RBP13.48□□□□□ -0.25
LRTM1-201ENST00000273286 CDCA8Q53HL2 280 aa13.48□□□□□ -0.25
LRTM1-201ENST00000273286 WHAMMQ8TF30 809 aa13.48□□□□□ -0.25
LRTM1-201ENST00000273286 XAGE2Q96GT9 111 aa13.48□□□□□ -0.25
LRTM1-201ENST00000273286 HRH3Q9Y5N1 445 aa13.48□□□□□ -0.25
LRTM1-201ENST00000273286 BTAF1O14981 1849 aa13.48□□□□□ -0.25
LRTM1-201ENST00000273286 CGNL1Q0VF96 1302 aa13.48□□□□□ -0.25
LRTM1-201ENST00000273286 KAT6BQ8WYB5 2073 aa13.48□□□□□ -0.25
LRTM1-201ENST00000273286 PAPPAQ13219 1627 aa13.48□□□□□ -0.25
LRTM1-201ENST00000273286 H7C1W4 665 aa13.47□□□□□ -0.25
LRTM1-201ENST00000273286 SOX11P35716 441 aa13.47□□□□□ -0.25
LRTM1-201ENST00000273286 AMPHP49418 695 aa13.47□□□□□ -0.25
LRTM1-201ENST00000273286 TMF1P82094 1093 aa13.47□□□□□ -0.25
LRTM1-201ENST00000273286 FOXR1Q6PIV2 292 aa13.47□□□□□ -0.25
LRTM1-201ENST00000273286 MAP3K19Q56UN5 1328 aa13.47□□□□□ -0.25
LRTM1-201ENST00000273286 HOXC9P31274 260 aa13.47□□□□□ -0.25
LRTM1-201ENST00000273286 PLPP7Q8NBV4 271 aa13.47□□□□□ -0.25
LRTM1-201ENST00000273286 FHDC1Q9C0D6 1143 aaPredicted RBP13.47□□□□□ -0.25
LRTM1-201ENST00000273286 PDGFDQ9GZP0 370 aaPredicted RBP13.47□□□□□ -0.25
LRTM1-201ENST00000273286 ETNK1Q9HBU6 452 aa13.47□□□□□ -0.25
LRTM1-201ENST00000273286 MAP3K5Q99683 1374 aa13.47□□□□□ -0.25
LRTM1-201ENST00000273286 SMG6Q86US8 1419 aaKnown RBP13.47□□□□□ -0.25
LRTM1-201ENST00000273286 MYOM1P52179 1685 aa13.46□□□□□ -0.25
LRTM1-201ENST00000273286 KIF24Q5T7B8 1368 aa13.46□□□□□ -0.26
LRTM1-201ENST00000273286 GTF2E1P29083 439 aaPredicted RBP13.46□□□□□ -0.26
LRTM1-201ENST00000273286 PHKA2P46019 1235 aa13.46□□□□□ -0.26
LRTM1-201ENST00000273286 SRSF11Q05519 484 aaKnown RBP13.46□□□□□ -0.26
LRTM1-201ENST00000273286 DDX54Q8TDD1 881 aaKnown RBP13.46□□□□□ -0.26
LRTM1-201ENST00000273286 GTPBP3Q969Y2 492 aaKnown RBP13.46□□□□□ -0.26
LRTM1-201ENST00000273286 GNASQ5JWF2 1037 aa13.45□□□□□ -0.26
LRTM1-201ENST00000273286 TMEM214Q6NUQ4 689 aaKnown RBP13.45□□□□□ -0.26
LRTM1-201ENST00000273286 LTV1Q96GA3 475 aaPredicted RBP13.45□□□□□ -0.26
LRTM1-201ENST00000273286 SYT17Q9BSW7 474 aa13.45□□□□□ -0.26
LRTM1-201ENST00000273286 ADAMTS8Q9UP79 889 aa13.45□□□□□ -0.26
LRTM1-201ENST00000273286 F11P03951 625 aa13.44□□□□□ -0.26
LRTM1-201ENST00000273286 MAP7D1Q3KQU3 841 aa13.44□□□□□ -0.26
LRTM1-201ENST00000273286 ZCRB1Q8TBF4 217 aaKnown RBP13.44□□□□□ -0.26
LRTM1-201ENST00000273286 ARXQ96QS3 562 aa13.44□□□□□ -0.26
LRTM1-201ENST00000273286 GPAMQ9HCL2 828 aa13.44□□□□□ -0.26
LRTM1-201ENST00000273286 USP47Q96K76 1375 aa13.43□□□□□ -0.26
LRTM1-201ENST00000273286 QSER1Q2KHR3 1735 aa13.43□□□□□ -0.26
LRTM1-201ENST00000273286 TLR1Q15399 786 aa13.43□□□□□ -0.26
LRTM1-201ENST00000273286 POM121Q96HA1 1249 aa13.43□□□□□ -0.26
LRTM1-201ENST00000273286 NUCKS1Q9H1E3 243 aaKnown RBP13.43□□□□□ -0.26
LRTM1-201ENST00000273286 MBIPQ9NS73 344 aa13.43□□□□□ -0.26
LRTM1-201ENST00000273286 FYB1O15117 783 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms