RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 UTP14CQ5TAP6 766 aaKnown RBP12.6□□□□□ -0.39
CHFR-201ENST00000266880 ANKRD30BQ9BXX2 1392 aa12.6□□□□□ -0.39
CHFR-201ENST00000266880 RAPGEF2Q9Y4G8 1499 aa12.6□□□□□ -0.39
CHFR-201ENST00000266880 SMIM24O75264 130 aa12.6□□□□□ -0.39
CHFR-201ENST00000266880 SDCCAG8Q86SQ7 713 aaPredicted RBP12.6□□□□□ -0.39
CHFR-201ENST00000266880 IFNKQ9P0W0 207 aa12.6□□□□□ -0.39
CHFR-201ENST00000266880 TNNC1P63316 161 aa12.59□□□□□ -0.39
CHFR-201ENST00000266880 SLC4A8Q2Y0W8 1093 aa12.59□□□□□ -0.39
CHFR-201ENST00000266880 ZNF287Q9HBT7 754 aa12.59□□□□□ -0.39
CHFR-201ENST00000266880 BTBD11A6QL63 1104 aa12.59□□□□□ -0.39
CHFR-201ENST00000266880 CCDC65Q8IXS2 484 aa12.59□□□□□ -0.39
CHFR-201ENST00000266880 NECAB1Q8N987 351 aa12.59□□□□□ -0.39
CHFR-201ENST00000266880 PYM1Q9BRP8 204 aaKnown RBP12.59□□□□□ -0.39
CHFR-201ENST00000266880 ATP5DP30049 168 aa12.59□□□□□ -0.39
CHFR-201ENST00000266880 ZBTB17Q13105 803 aa12.59□□□□□ -0.39
CHFR-201ENST00000266880 MGEA5O60502 916 aa12.59□□□□□ -0.39
CHFR-201ENST00000266880 ZSCAN22P10073 491 aaPredicted RBP12.59□□□□□ -0.39
CHFR-201ENST00000266880 MARCKSP29966 332 aaPredicted RBP12.59□□□□□ -0.39
CHFR-201ENST00000266880 CUX1P39880 1505 aa12.59□□□□□ -0.39
CHFR-201ENST00000266880 KRT86O43790 486 aa12.59□□□□□ -0.39
CHFR-201ENST00000266880 FAF1Q9UNN5 650 aaPredicted RBP12.59□□□□□ -0.39
CHFR-201ENST00000266880 MCM7P33993 719 aa12.59□□□□□ -0.39
CHFR-201ENST00000266880 CCDC14Q49A88 953 aa12.59□□□□□ -0.39
CHFR-201ENST00000266880 CLUL1Q15846 466 aa12.59□□□□□ -0.39
CHFR-201ENST00000266880 WIZO95785 1651 aa12.58□□□□□ -0.39
CHFR-201ENST00000266880 KRT83P78385 493 aa12.58□□□□□ -0.39
CHFR-201ENST00000266880 CCDC92Q53HC0 331 aaPredicted RBP12.58□□□□□ -0.39
CHFR-201ENST00000266880 C17orf53Q8N3J3 647 aaPredicted RBP12.58□□□□□ -0.39
CHFR-201ENST00000266880 TSGA10Q9BZW7 698 aa12.58□□□□□ -0.4
CHFR-201ENST00000266880 RPGRIP1LQ68CZ1 1315 aa12.58□□□□□ -0.4
CHFR-201ENST00000266880 METAP2P50579 478 aaKnown RBP eCLIP12.58□□□□□ -0.4
CHFR-201ENST00000266880 NEK11Q8NG66 645 aa12.58□□□□□ -0.4
CHFR-201ENST00000266880 FAM169AQ9Y6X4 670 aa12.58□□□□□ -0.4
CHFR-201ENST00000266880 GPRASP1Q5JY77 1395 aa12.58□□□□□ -0.4
CHFR-201ENST00000266880 OAS2P29728 719 aaKnown RBP12.58□□□□□ -0.4
CHFR-201ENST00000266880 TATP17735 454 aaPredicted RBP12.58□□□□□ -0.4
CHFR-201ENST00000266880 KIAA1524Q8TCG1 905 aa12.58□□□□□ -0.4
CHFR-201ENST00000266880 POLA1P09884 1462 aaPredicted RBP12.58□□□□□ -0.4
CHFR-201ENST00000266880 RTL1A6NKG5 1358 aa12.58□□□□□ -0.4
CHFR-201ENST00000266880 MGARPQ8TDB4 240 aa12.58□□□□□ -0.4
CHFR-201ENST00000266880 ABTB1Q969K4 478 aaPredicted RBP12.58□□□□□ -0.4
CHFR-201ENST00000266880 CCDC42Q96M95 316 aa12.58□□□□□ -0.4
CHFR-201ENST00000266880 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.57□□□□□ -0.4
CHFR-201ENST00000266880 ARHGAP25P42331 645 aa12.57□□□□□ -0.4
CHFR-201ENST00000266880 PPANQ9NQ55 473 aaKnown RBP12.57□□□□□ -0.4
CHFR-201ENST00000266880 FRMD4BQ9Y2L6 1034 aa12.57□□□□□ -0.4
CHFR-201ENST00000266880 SMARCA2P51531 1590 aa12.57□□□□□ -0.4
CHFR-201ENST00000266880 I3L4J1 428 aa12.57□□□□□ -0.4
CHFR-201ENST00000266880 PPFIA2O75334 1257 aa12.57□□□□□ -0.4
CHFR-201ENST00000266880 ERMNQ8TAM6 284 aa12.57□□□□□ -0.4
CHFR-201ENST00000266880 MAK16Q9BXY0 300 aaKnown RBP12.57□□□□□ -0.4
CHFR-201ENST00000266880 CAPN7Q9Y6W3 813 aa12.57□□□□□ -0.4
CHFR-201ENST00000266880 RASA3Q14644 834 aa12.57□□□□□ -0.4
CHFR-201ENST00000266880 ATP6V0A2Q9Y487 856 aa12.57□□□□□ -0.4
CHFR-201ENST00000266880 CA8P35219 290 aa12.57□□□□□ -0.4
CHFR-201ENST00000266880 DDX21Q9NR30 783 aaKnown RBP eCLIP12.57□□□□□ -0.4
CHFR-201ENST00000266880 GIGYF1O75420 1035 aaPredicted RBP12.57□□□□□ -0.4
CHFR-201ENST00000266880 SEL1L2Q5TEA6 688 aa12.57□□□□□ -0.4
CHFR-201ENST00000266880 IQCA1Q86XH1 822 aa12.57□□□□□ -0.4
CHFR-201ENST00000266880 MRPS27Q92552 414 aaKnown RBP12.57□□□□□ -0.4
CHFR-201ENST00000266880 BAIAP2L1Q9UHR4 511 aa12.57□□□□□ -0.4
CHFR-201ENST00000266880 RSPH3Q86UC2 560 aa12.57□□□□□ -0.4
CHFR-201ENST00000266880 ERO1AQ96HE7 468 aa12.57□□□□□ -0.4
CHFR-201ENST00000266880 PHF23Q9BUL5 403 aaPredicted RBP12.57□□□□□ -0.4
CHFR-201ENST00000266880 LRRC2Q9BYS8 371 aa12.57□□□□□ -0.4
CHFR-201ENST00000266880 VCX3AQ9NNX9 186 aa12.57□□□□□ -0.4
CHFR-201ENST00000266880 E7EVH7 732 aa12.56□□□□□ -0.4
CHFR-201ENST00000266880 LONRF3Q496Y0 759 aa12.56□□□□□ -0.4
CHFR-201ENST00000266880 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.56□□□□□ -0.4
CHFR-201ENST00000266880 ZNF213O14771 459 aa12.56□□□□□ -0.4
CHFR-201ENST00000266880 TRPC3Q13507 836 aa12.56□□□□□ -0.4
CHFR-201ENST00000266880 GOLGA6BA6NDN3 693 aa12.56□□□□□ -0.4
CHFR-201ENST00000266880 FAM13AO94988 1023 aa12.56□□□□□ -0.4
CHFR-201ENST00000266880 SEPT8Q92599 483 aa12.56□□□□□ -0.4
CHFR-201ENST00000266880 CCDC8Q9H0W5 538 aaPredicted RBP12.56□□□□□ -0.4
CHFR-201ENST00000266880 MRPL46Q9H2W6 279 aaKnown RBP12.56□□□□□ -0.4
CHFR-201ENST00000266880 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.56□□□□□ -0.4
CHFR-201ENST00000266880 WDR97A6NE52 1622 aa12.56□□□□□ -0.4
CHFR-201ENST00000266880 RIOK3O14730 519 aaKnown RBP12.56□□□□□ -0.4
CHFR-201ENST00000266880 TUBB4BP68371 445 aa12.56□□□□□ -0.4
CHFR-201ENST00000266880 VSIG1Q86XK7 387 aa12.56□□□□□ -0.4
CHFR-201ENST00000266880 ZNF444Q8N0Y2 327 aaPredicted RBP12.56□□□□□ -0.4
CHFR-201ENST00000266880 GABPB1Q06547 395 aaPredicted RBP12.56□□□□□ -0.4
CHFR-201ENST00000266880 ARHGAP24Q8N264 748 aa12.56□□□□□ -0.4
CHFR-201ENST00000266880 IFIT1P09914 478 aaKnown RBP12.56□□□□□ -0.4
CHFR-201ENST00000266880 PNISRQ8TF01 805 aaKnown RBP12.55□□□□□ -0.4
CHFR-201ENST00000266880 FYCO1Q9BQS8 1478 aa12.55□□□□□ -0.4
CHFR-201ENST00000266880 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.55□□□□□ -0.4
CHFR-201ENST00000266880 PPP1R21Q6ZMI0 780 aa12.55□□□□□ -0.4
CHFR-201ENST00000266880 THUMPD2Q9BTF0 503 aaKnown RBP12.55□□□□□ -0.4
CHFR-201ENST00000266880 LOC102724159A0A0B4J2E5 919 aa12.55□□□□□ -0.4
CHFR-201ENST00000266880 IARSP41252 1262 aaKnown RBP12.55□□□□□ -0.4
CHFR-201ENST00000266880 CALCOCO2Q13137 446 aa12.55□□□□□ -0.4
CHFR-201ENST00000266880 PWP2Q15269 919 aaKnown RBP12.55□□□□□ -0.4
CHFR-201ENST00000266880 LRRC27Q9C0I9 530 aa12.55□□□□□ -0.4
CHFR-201ENST00000266880 BAG2O95816 211 aa12.55□□□□□ -0.4
CHFR-201ENST00000266880 TUBB4AP04350 444 aa12.55□□□□□ -0.4
CHFR-201ENST00000266880 CTNND2Q9UQB3 1225 aa12.55□□□□□ -0.4
CHFR-201ENST00000266880 SPECC1L-ADORA2AF8WAN1 911 aa12.55□□□□□ -0.4
CHFR-201ENST00000266880 NKTRP30414 1462 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms