RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 PRKAR2BP31323 418 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 ARHGAP4P98171 946 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 ANKRD20A3Q5VUR7 823 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 GSTA5Q7RTV2 222 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 SYCE1Q8N0S2 351 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 NUP58Q9BVL2 599 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 ANGPTL3Q9Y5C1 460 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 GOLGA8BA8MQT2 603 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 ATF3P18847 181 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 KIFAP3Q92845 792 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 NEK1Q96PY6 1258 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 A0A1B0GW55 424 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 DUX4L2P0CJ85 424 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 DUX4L3P0CJ86 424 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 DUX4L4P0CJ87 422 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 DUX4L5P0CJ88 424 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 DUX4L6P0CJ89 424 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 DUX4L7P0CJ90 424 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 IBSPP21815 317 aaPredicted RBP6.14□□□□□ -1.43
XRN1-201ENST00000264951 ERCC5P28715 1186 aaPredicted RBP6.14□□□□□ -1.43
XRN1-201ENST00000264951 GCKP35557 465 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 ESRRGP62508 458 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 DUX4Q9UBX2 424 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 LRRD1A4D1F6 860 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 ZEB2O60315 1214 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 CALM1P0DP23 149 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 CALM2P0DP24 149 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 CALM3P0DP25 149 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 ERCC3P19447 782 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 PDE6BP35913 854 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 CCDC117Q8IWD4 279 aaPredicted RBP6.14□□□□□ -1.43
XRN1-201ENST00000264951 SDCCAG3Q96C92 435 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 KRT23Q9C075 422 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 SPC25Q9HBM1 224 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 CCDC170Q8IYT3 715 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 SELENOSQ9BQE4 189 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 MKNK2Q9HBH9 465 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 NSD2O96028 1365 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 GOLGA6BA6NDN3 693 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 ZNF213O14771 459 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 NCBP1Q09161 790 aaKnown RBP6.14□□□□□ -1.43
XRN1-201ENST00000264951 NMIQ13287 307 aaPredicted RBP6.14□□□□□ -1.43
XRN1-201ENST00000264951 SAMD1Q6SPF0 538 aaPredicted RBP6.14□□□□□ -1.43
XRN1-201ENST00000264951 NEK11Q8NG66 645 aa6.14□□□□□ -1.43
XRN1-201ENST00000264951 UTP11Q9Y3A2 253 aaKnown RBP6.14□□□□□ -1.43
XRN1-201ENST00000264951 ZSCAN22P10073 491 aaPredicted RBP6.13□□□□□ -1.43
XRN1-201ENST00000264951 ARL1P40616 181 aaPredicted RBP6.13□□□□□ -1.43
XRN1-201ENST00000264951 SYTL4Q96C24 671 aaPredicted RBP6.13□□□□□ -1.43
XRN1-201ENST00000264951 TRIM4Q9C037 500 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 MMRN2Q9H8L6 949 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 FAF1Q9UNN5 650 aaPredicted RBP6.13□□□□□ -1.43
XRN1-201ENST00000264951 TRIM37O94972 964 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 BAG3O95817 575 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 FKBP4Q02790 459 aaKnown RBP eCLIP6.13□□□□□ -1.43
XRN1-201ENST00000264951 PPP1R7Q15435 360 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 NRBF2Q96F24 287 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 ANKRD50Q9ULJ7 1429 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 PPP2R3AQ06190 1150 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 RUFY3Q7L099 469 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 TUBB6Q9BUF5 446 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 UBA5Q9GZZ9 404 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 ZSCAN23Q3MJ62 389 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 TTC36A6NLP5 189 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 TROVE2P10155 538 aaKnown RBP eCLIP6.13□□□□□ -1.43
XRN1-201ENST00000264951 ZNF710Q8N1W2 664 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 CCDC89Q8N998 374 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 BANK1Q8NDB2 785 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 TRERF1Q96PN7 1200 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 KIF21BO75037 1637 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 GOLGA8AA7E2F4 631 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 MUM1L1Q5H9M0 696 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 TMEM87AQ8NBN3 555 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 NCOA7Q8NI08 942 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 TMOD4Q9NZQ9 345 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 TPCN1Q9ULQ1 816 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 IDEP14735 1019 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 HELBQ8NG08 1087 aaPredicted RBP6.13□□□□□ -1.43
XRN1-201ENST00000264951 RAB17Q9H0T7 212 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 LRPPRCP42704 1394 aaKnown RBP6.13□□□□□ -1.43
XRN1-201ENST00000264951 E9PMD0 336 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 FLOT1O75955 427 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 STARD3NLO95772 234 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 SLC8A3P57103 927 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 ZNF444Q8N0Y2 327 aaPredicted RBP6.13□□□□□ -1.43
XRN1-201ENST00000264951 WHAMMQ8TF30 809 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 KLHL14Q9P2G3 628 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 SCINQ9Y6U3 715 aa6.13□□□□□ -1.43
XRN1-201ENST00000264951 IL16Q14005 1332 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 NBPF6Q5VWK0 638 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 C8orf74Q6P047 294 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.12□□□□□ -1.43
XRN1-201ENST00000264951 PAWRQ96IZ0 340 aaKnown RBP6.12□□□□□ -1.43
XRN1-201ENST00000264951 NBPF4Q96M43 638 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 CRCPO75575 148 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 KRT3P12035 628 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 SEPT8Q92599 483 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 CCDC51Q96ER9 411 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 NOX5Q96PH1 765 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 ATP2C2O75185 946 aa6.12□□□□□ -1.43
XRN1-201ENST00000264951 HSPA1LP34931 641 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms