RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 NECTIN1Q15223 517 aa15.28■□□□□ 0.04
NUP54-201ENST00000264883 NECAB1Q8N987 351 aa15.28■□□□□ 0.04
NUP54-201ENST00000264883 AXIN2Q9Y2T1 843 aa15.28■□□□□ 0.04
NUP54-201ENST00000264883 LMO7Q8WWI1 1683 aa15.28■□□□□ 0.04
NUP54-201ENST00000264883 ALDH1L1O75891 902 aa15.27■□□□□ 0.04
NUP54-201ENST00000264883 SASH3O75995 380 aa15.27■□□□□ 0.04
NUP54-201ENST00000264883 TBC1D8O95759 1140 aa15.27■□□□□ 0.04
NUP54-201ENST00000264883 OS9Q13438 667 aaPredicted RBP15.27■□□□□ 0.04
NUP54-201ENST00000264883 NECTIN2Q92692 538 aa15.27■□□□□ 0.04
NUP54-201ENST00000264883 EXOC4Q96A65 974 aa15.27■□□□□ 0.04
NUP54-201ENST00000264883 PSD3Q9NYI0 1048 aa15.27■□□□□ 0.04
NUP54-201ENST00000264883 SPG7Q9UQ90 795 aa15.27■□□□□ 0.04
NUP54-201ENST00000264883 JRKLQ9Y4A0 524 aa15.27■□□□□ 0.04
NUP54-201ENST00000264883 LMAN1P49257 510 aa15.27■□□□□ 0.03
NUP54-201ENST00000264883 STX1AQ16623 288 aa15.27■□□□□ 0.03
NUP54-201ENST00000264883 ME3Q16798 604 aa15.27■□□□□ 0.03
NUP54-201ENST00000264883 TTC31Q49AM3 519 aaPredicted RBP15.27■□□□□ 0.03
NUP54-201ENST00000264883 IQUBQ8NA54 791 aa15.27■□□□□ 0.03
NUP54-201ENST00000264883 PLEKHG2Q9H7P9 1386 aa15.27■□□□□ 0.03
NUP54-201ENST00000264883 CPDO75976 1380 aa15.26■□□□□ 0.03
NUP54-201ENST00000264883 CCDC158Q5M9N0 1113 aa15.26■□□□□ 0.03
NUP54-201ENST00000264883 PRPF40BQ6NWY9 871 aaKnown RBP15.26■□□□□ 0.03
NUP54-201ENST00000264883 CCDC34Q96HJ3 373 aa15.26■□□□□ 0.03
NUP54-201ENST00000264883 PHAXQ9H814 394 aaKnown RBP15.26■□□□□ 0.03
NUP54-201ENST00000264883 RNF216Q9NWF9 866 aaPredicted RBP15.26■□□□□ 0.03
NUP54-201ENST00000264883 IFIT2P09913 472 aaKnown RBP15.26■□□□□ 0.03
NUP54-201ENST00000264883 ACTN2P35609 894 aa15.26■□□□□ 0.03
NUP54-201ENST00000264883 HOMER1Q86YM7 354 aa15.26■□□□□ 0.03
NUP54-201ENST00000264883 USHBP1Q8N6Y0 703 aa15.26■□□□□ 0.03
NUP54-201ENST00000264883 PGBD1Q96JS3 809 aa15.26■□□□□ 0.03
NUP54-201ENST00000264883 OSBPL5Q9H0X9 879 aaPredicted RBP15.26■□□□□ 0.03
NUP54-201ENST00000264883 TOMM22Q9NS69 142 aa15.26■□□□□ 0.03
NUP54-201ENST00000264883 ZC3H6P61129 1189 aaKnown RBP15.25■□□□□ 0.03
NUP54-201ENST00000264883 CC2D1AQ6P1N0 951 aaPredicted RBP15.25■□□□□ 0.03
NUP54-201ENST00000264883 ANKRD24Q8TF21 1146 aa15.25■□□□□ 0.03
NUP54-201ENST00000264883 SRRTQ9BXP5 876 aaKnown RBP15.25■□□□□ 0.03
NUP54-201ENST00000264883 IMPACTQ9P2X3 320 aa15.25■□□□□ 0.03
NUP54-201ENST00000264883 ADAM21Q9UKJ8 722 aa15.25■□□□□ 0.03
NUP54-201ENST00000264883 EFCAB8A8MWE9 144 aa15.25■□□□□ 0.03
NUP54-201ENST00000264883 TADA3O75528 432 aa15.25■□□□□ 0.03
NUP54-201ENST00000264883 NBPF7P0C2Y1 421 aaPredicted RBP15.25■□□□□ 0.03
NUP54-201ENST00000264883 CABLES1Q8TDN4 633 aa15.25■□□□□ 0.03
NUP54-201ENST00000264883 MAP4K1Q92918 833 aa15.25■□□□□ 0.03
NUP54-201ENST00000264883 LRRC59Q96AG4 307 aaKnown RBP15.25■□□□□ 0.03
NUP54-201ENST00000264883 HMG20BQ9P0W2 317 aa15.25■□□□□ 0.03
NUP54-201ENST00000264883 DNAI1Q9UI46 699 aa15.25■□□□□ 0.03
NUP54-201ENST00000264883 PHLPP2Q6ZVD8 1323 aa15.24■□□□□ 0.03
NUP54-201ENST00000264883 GIGYF1O75420 1035 aaPredicted RBP15.24■□□□□ 0.03
NUP54-201ENST00000264883 MAGEA9P43362 315 aa15.24■□□□□ 0.03
NUP54-201ENST00000264883 EIF4A1P60842 406 aaKnown RBP15.24■□□□□ 0.03
NUP54-201ENST00000264883 ETF1P62495 437 aaKnown RBP15.24■□□□□ 0.03
NUP54-201ENST00000264883 PTH1RQ03431 593 aa15.24■□□□□ 0.03
NUP54-201ENST00000264883 CREB3L3Q68CJ9 461 aa15.24■□□□□ 0.03
NUP54-201ENST00000264883 LEKR1Q6ZMV7 388 aa15.24■□□□□ 0.03
NUP54-201ENST00000264883 PACS2Q86VP3 889 aa15.24■□□□□ 0.03
NUP54-201ENST00000264883 DHX40Q8IX18 779 aaKnown RBP15.24■□□□□ 0.03
NUP54-201ENST00000264883 DRC1Q96MC2 740 aa15.24■□□□□ 0.03
NUP54-201ENST00000264883 TOM1O60784 492 aa15.24■□□□□ 0.03
NUP54-201ENST00000264883 IVLP07476 585 aa15.24■□□□□ 0.03
NUP54-201ENST00000264883 ADCK5Q3MIX3 580 aa15.24■□□□□ 0.03
NUP54-201ENST00000264883 CCDC150Q8NCX0 1101 aa15.24■□□□□ 0.03
NUP54-201ENST00000264883 RBM8AQ9Y5S9 174 aaKnown RBP15.24■□□□□ 0.03
NUP54-201ENST00000264883 CLGNO14967 610 aa15.23■□□□□ 0.03
NUP54-201ENST00000264883 APPP05067 770 aa15.23■□□□□ 0.03
NUP54-201ENST00000264883 KCNJ6P48051 423 aa15.23■□□□□ 0.03
NUP54-201ENST00000264883 CARD6Q9BX69 1037 aa15.23■□□□□ 0.03
NUP54-201ENST00000264883 ABCA3Q99758 1704 aa15.23■□□□□ 0.03
NUP54-201ENST00000264883 OVOS2A0A0G2JMS6 1433 aa15.23■□□□□ 0.03
NUP54-201ENST00000264883 ROBO1Q9Y6N7 1651 aa15.23■□□□□ 0.03
NUP54-201ENST00000264883 CTAGE5O15320 804 aa15.22■□□□□ 0.03
NUP54-201ENST00000264883 NRDCO43847 1150 aa15.22■□□□□ 0.03
NUP54-201ENST00000264883 EVCP57679 992 aa15.22■□□□□ 0.03
NUP54-201ENST00000264883 TSGA10IPQ3SY00 556 aa15.22■□□□□ 0.03
NUP54-201ENST00000264883 NBPF11Q86T75 865 aa15.22■□□□□ 0.03
NUP54-201ENST00000264883 PI4KAP2A4QPH2 592 aa15.22■□□□□ 0.03
NUP54-201ENST00000264883 URI1O94763 535 aaPredicted RBP15.22■□□□□ 0.03
NUP54-201ENST00000264883 AXDND1Q5T1B0 1012 aaPredicted RBP15.22■□□□□ 0.03
NUP54-201ENST00000264883 BLOC1S2Q6QNY1 142 aa15.22■□□□□ 0.03
NUP54-201ENST00000264883 PI4KAP1Q8N8J0 262 aa15.22■□□□□ 0.03
NUP54-201ENST00000264883 CERKQ8TCT0 537 aa15.22■□□□□ 0.03
NUP54-201ENST00000264883 ARFGAP3Q9NP61 516 aa15.22■□□□□ 0.03
NUP54-201ENST00000264883 TPCN1Q9ULQ1 816 aa15.22■□□□□ 0.03
NUP54-201ENST00000264883 JCADQ9P266 1359 aa15.22■□□□□ 0.03
NUP54-201ENST00000264883 ATP2B1P20020 1258 aa15.21■□□□□ 0.03
NUP54-201ENST00000264883 SFPQP23246 707 aaKnown RBP eCLIP15.21■□□□□ 0.03
NUP54-201ENST00000264883 KRT32Q14532 448 aa15.21■□□□□ 0.03
NUP54-201ENST00000264883 LRRFIP1Q32MZ4 808 aaKnown RBP15.21■□□□□ 0.03
NUP54-201ENST00000264883 ARMCX5Q6P1M9 558 aa15.21■□□□□ 0.03
NUP54-201ENST00000264883 EPC1Q9H2F5 836 aa15.21■□□□□ 0.03
NUP54-201ENST00000264883 DBF4Q9UBU7 674 aaPredicted RBP15.21■□□□□ 0.03
NUP54-201ENST00000264883 ADCY9O60503 1353 aa15.21■□□□□ 0.03
NUP54-201ENST00000264883 CCP110O43303 1012 aa15.21■□□□□ 0.03
NUP54-201ENST00000264883 LARP1Q6PKG0 1096 aaKnown RBP15.21■□□□□ 0.03
NUP54-201ENST00000264883 AOPEPQ8N6M6 819 aa15.21■□□□□ 0.03
NUP54-201ENST00000264883 GPATCH11Q8N954 259 aa15.21■□□□□ 0.03
NUP54-201ENST00000264883 DEF6Q9H4E7 631 aa15.21■□□□□ 0.03
NUP54-201ENST00000264883 ANO10Q9NW15 660 aa15.21■□□□□ 0.03
NUP54-201ENST00000264883 CHPF2Q9P2E5 772 aa15.21■□□□□ 0.03
NUP54-201ENST00000264883 SLC27A2O14975 620 aa15.2■□□□□ 0.02
NUP54-201ENST00000264883 RPS6KB1P23443 525 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms