RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 MROH1Q8NDA8 1641 aa23.04■■□□□ 1.28
CSPG5-201ENST00000264723 RIOK3O14730 519 aaKnown RBP23.04■■□□□ 1.28
CSPG5-201ENST00000264723 SLC3A2P08195 630 aaKnown RBP23.04■■□□□ 1.28
CSPG5-201ENST00000264723 DHX32Q7L7V1 743 aaKnown RBP23.04■■□□□ 1.28
CSPG5-201ENST00000264723 EYA2O00167 538 aa23.04■■□□□ 1.28
CSPG5-201ENST00000264723 STX1AQ16623 288 aa23.04■■□□□ 1.28
CSPG5-201ENST00000264723 JMYQ8N9B5 988 aa23.04■■□□□ 1.28
CSPG5-201ENST00000264723 JAG2Q9Y219 1238 aa23.04■■□□□ 1.28
CSPG5-201ENST00000264723 LMOD1P29536 600 aaPredicted RBP23.03■■□□□ 1.28
CSPG5-201ENST00000264723 CCDC24Q8N4L8 307 aa23.03■■□□□ 1.28
CSPG5-201ENST00000264723 PCMTD1Q96MG8 357 aaPredicted RBP23.03■■□□□ 1.28
CSPG5-201ENST00000264723 DBNLQ9UJU6 430 aaKnown RBP23.03■■□□□ 1.28
CSPG5-201ENST00000264723 NCOA3Q9Y6Q9 1424 aa23.03■■□□□ 1.28
CSPG5-201ENST00000264723 SFPQP23246 707 aaKnown RBP eCLIP23.03■■□□□ 1.28
CSPG5-201ENST00000264723 EPHA10Q5JZY3 1008 aa23.03■■□□□ 1.28
CSPG5-201ENST00000264723 ZSCAN16Q9H4T2 348 aaPredicted RBP23.03■■□□□ 1.28
CSPG5-201ENST00000264723 CDKL5O76039 1030 aa23.03■■□□□ 1.28
CSPG5-201ENST00000264723 KLHL10Q6JEL2 608 aa23.03■■□□□ 1.28
CSPG5-201ENST00000264723 MAP4K1Q92918 833 aa23.03■■□□□ 1.28
CSPG5-201ENST00000264723 ZC3H13Q5T200 1668 aaKnown RBP23.02■■□□□ 1.28
CSPG5-201ENST00000264723 UBAP1LF5GYI3 381 aa23.02■■□□□ 1.28
CSPG5-201ENST00000264723 IKQ13123 557 aaPredicted RBP23.02■■□□□ 1.28
CSPG5-201ENST00000264723 SLC12A7Q9Y666 1083 aa23.02■■□□□ 1.28
CSPG5-201ENST00000264723 TMEM67Q5HYA8 995 aa23.02■■□□□ 1.27
CSPG5-201ENST00000264723 GOLGA8AA7E2F4 631 aa23.01■■□□□ 1.27
CSPG5-201ENST00000264723 PDIA4P13667 645 aaKnown RBP23.01■■□□□ 1.27
CSPG5-201ENST00000264723 MIGA1Q8NAN2 632 aa23.01■■□□□ 1.27
CSPG5-201ENST00000264723 NCOA7Q8NI08 942 aa23.01■■□□□ 1.27
CSPG5-201ENST00000264723 NPHP4O75161 1426 aaPredicted RBP23.01■■□□□ 1.27
CSPG5-201ENST00000264723 TM6SF1Q9BZW5 370 aa23■■□□□ 1.27
CSPG5-201ENST00000264723 TAF6LQ9Y6J9 622 aa23■■□□□ 1.27
CSPG5-201ENST00000264723 SSH2Q76I76 1423 aa23■■□□□ 1.27
CSPG5-201ENST00000264723 PRC1O43663 620 aa23■■□□□ 1.27
CSPG5-201ENST00000264723 CEP135Q66GS9 1140 aa23■■□□□ 1.27
CSPG5-201ENST00000264723 ASAP1Q9ULH1 1129 aa22.99■■□□□ 1.27
CSPG5-201ENST00000264723 SHPRHQ149N8 1683 aa22.99■■□□□ 1.27
CSPG5-201ENST00000264723 TAF5LO75529 589 aa22.99■■□□□ 1.27
CSPG5-201ENST00000264723 ITGA6P23229 1130 aa22.99■■□□□ 1.27
CSPG5-201ENST00000264723 CDC5LQ99459 802 aaKnown RBP22.99■■□□□ 1.27
CSPG5-201ENST00000264723 DEPDC5O75140 1603 aa22.99■■□□□ 1.27
CSPG5-201ENST00000264723 RNF113AO15541 343 aaKnown RBP22.98■■□□□ 1.27
CSPG5-201ENST00000264723 NECTIN1Q15223 517 aa22.98■■□□□ 1.27
CSPG5-201ENST00000264723 NBPF5PQ86XG9 351 aaPredicted RBP22.98■■□□□ 1.27
CSPG5-201ENST00000264723 ZNF219Q9P2Y4 722 aaPredicted RBP22.98■■□□□ 1.27
CSPG5-201ENST00000264723 DZIP1Q86YF9 867 aaKnown RBP22.98■■□□□ 1.27
CSPG5-201ENST00000264723 CCDC191Q8NCU4 936 aa22.98■■□□□ 1.27
CSPG5-201ENST00000264723 PDLIM2Q96JY6 352 aa22.98■■□□□ 1.27
CSPG5-201ENST00000264723 FRMPD1Q5SYB0 1578 aa22.98■■□□□ 1.27
CSPG5-201ENST00000264723 ERICH4A6NGS2 130 aa22.98■■□□□ 1.27
CSPG5-201ENST00000264723 CYP21A2P08686 494 aa22.98■■□□□ 1.27
CSPG5-201ENST00000264723 USP5P45974 858 aa22.98■■□□□ 1.27
CSPG5-201ENST00000264723 LRRC24Q50LG9 513 aa22.98■■□□□ 1.27
CSPG5-201ENST00000264723 CPLX3Q8WVH0 158 aa22.98■■□□□ 1.27
CSPG5-201ENST00000264723 TPM1P09493 284 aa22.97■■□□□ 1.27
CSPG5-201ENST00000264723 TSR1Q2NL82 804 aaKnown RBP22.97■■□□□ 1.27
CSPG5-201ENST00000264723 CCDC152Q4G0S7 254 aa22.97■■□□□ 1.27
CSPG5-201ENST00000264723 MRPS27Q92552 414 aaKnown RBP22.97■■□□□ 1.27
CSPG5-201ENST00000264723 TTC14Q96N46 770 aa22.97■■□□□ 1.27
CSPG5-201ENST00000264723 MYRIPQ8NFW9 859 aa22.97■■□□□ 1.27
CSPG5-201ENST00000264723 KIF18AQ8NI77 898 aa22.97■■□□□ 1.27
CSPG5-201ENST00000264723 URI1O94763 535 aaPredicted RBP22.97■■□□□ 1.27
CSPG5-201ENST00000264723 METAP2P50579 478 aaKnown RBP eCLIP22.97■■□□□ 1.27
CSPG5-201ENST00000264723 CYP7A1P22680 504 aa22.96■■□□□ 1.27
CSPG5-201ENST00000264723 U2AF2P26368 475 aaKnown RBP eCLIP22.96■■□□□ 1.27
CSPG5-201ENST00000264723 IARSP41252 1262 aaKnown RBP22.96■■□□□ 1.27
CSPG5-201ENST00000264723 USP28Q96RU2 1077 aa22.96■■□□□ 1.27
CSPG5-201ENST00000264723 SLC26A6Q9BXS9 759 aa22.96■■□□□ 1.27
CSPG5-201ENST00000264723 CLSTN2Q9H4D0 955 aa22.96■■□□□ 1.27
CSPG5-201ENST00000264723 CTAGE5O15320 804 aa22.96■■□□□ 1.27
CSPG5-201ENST00000264723 RBM5P52756 815 aaKnown RBP eCLIP22.96■■□□□ 1.27
CSPG5-201ENST00000264723 TTF1Q15361 905 aaPredicted RBP22.96■■□□□ 1.27
CSPG5-201ENST00000264723 KBTBD3Q8NAB2 608 aa22.96■■□□□ 1.27
CSPG5-201ENST00000264723 XAGE2Q96GT9 111 aa22.96■■□□□ 1.27
CSPG5-201ENST00000264723 IGKV5-2P06315 115 aa22.96■■□□□ 1.27
CSPG5-201ENST00000264723 PPP1R1BQ9UD71 204 aaPredicted RBP22.95■■□□□ 1.26
CSPG5-201ENST00000264723 MFSD6Q6ZSS7 791 aa22.95■■□□□ 1.26
CSPG5-201ENST00000264723 MKNK2Q9HBH9 465 aa22.95■■□□□ 1.26
CSPG5-201ENST00000264723 GPHNQ9NQX3 736 aaPredicted RBP22.95■■□□□ 1.26
CSPG5-201ENST00000264723 KDRP35968 1356 aa22.95■■□□□ 1.26
CSPG5-201ENST00000264723 ZNF75DP51815 510 aa22.95■■□□□ 1.26
CSPG5-201ENST00000264723 GTF3C6Q969F1 213 aa22.95■■□□□ 1.26
CSPG5-201ENST00000264723 ALG1Q9BT22 464 aa22.95■■□□□ 1.26
CSPG5-201ENST00000264723 UTP14AQ9BVJ6 771 aaKnown RBP22.95■■□□□ 1.26
CSPG5-201ENST00000264723 IFNKQ9P0W0 207 aa22.95■■□□□ 1.26
CSPG5-201ENST00000264723 CYP27B1O15528 508 aa22.94■■□□□ 1.26
CSPG5-201ENST00000264723 CNNM3Q8NE01 707 aa22.94■■□□□ 1.26
CSPG5-201ENST00000264723 MYL10Q9BUA6 226 aa22.94■■□□□ 1.26
CSPG5-201ENST00000264723 PUS3Q9BZE2 481 aaKnown RBP22.94■■□□□ 1.26
CSPG5-201ENST00000264723 MAP2P11137 1827 aaKnown RBP22.94■■□□□ 1.26
CSPG5-201ENST00000264723 ZFYP08048 801 aaPredicted RBP22.94■■□□□ 1.26
CSPG5-201ENST00000264723 MRVI1Q9Y6F6 885 aa22.94■■□□□ 1.26
CSPG5-201ENST00000264723 PPLO60437 1756 aa22.94■■□□□ 1.26
CSPG5-201ENST00000264723 ATP5JP18859 108 aa22.94■■□□□ 1.26
CSPG5-201ENST00000264723 ANKRD18AQ8IVF6 992 aa22.94■■□□□ 1.26
CSPG5-201ENST00000264723 ANKRD20A12PQ8NF67 263 aa22.94■■□□□ 1.26
CSPG5-201ENST00000264723 SLC4A4Q9Y6R1 1079 aa22.94■■□□□ 1.26
CSPG5-201ENST00000264723 SCRN1Q12765 414 aa22.93■■□□□ 1.26
CSPG5-201ENST00000264723 SPECC1Q5M775 1068 aa22.93■■□□□ 1.26
CSPG5-201ENST00000264723 BCL2L12Q9HB09 334 aa22.93■■□□□ 1.26
CSPG5-201ENST00000264723 C6orf229H3BNL8 230 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms