RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 ZNF622Q969S3 477 aaKnown RBP eCLIP27.56■■■□□ 24e-19■□□□□ 10.1
UFD1-201ENST00000263202 ANKIB1Q9P2G1 1089 aa27.56■■■□□ 2
UFD1-201ENST00000263202 ZNF804BA4D1E1 1349 aa27.56■■■□□ 2
UFD1-201ENST00000263202 UQCRFS1P1P0C7P4 283 aa27.55■■■□□ 2
UFD1-201ENST00000263202 CHRNA5P30532 468 aa27.55■■■□□ 2
UFD1-201ENST00000263202 GPSM2P81274 684 aa27.55■■■□□ 2
UFD1-201ENST00000263202 SP8Q8IXZ3 490 aa27.55■■■□□ 2
UFD1-201ENST00000263202 SLX4Q8IY92 1834 aa27.55■■■□□ 2
UFD1-201ENST00000263202 MCAMP43121 646 aa27.55■■■□□ 2
UFD1-201ENST00000263202 BCAMP50895 628 aa27.55■■■□□ 2
UFD1-201ENST00000263202 PAG1Q9NWQ8 432 aa27.55■■■□□ 2
UFD1-201ENST00000263202 LEMD3Q9Y2U8 911 aa27.55■■■□□ 2
UFD1-201ENST00000263202 ATP6V0A2Q9Y487 856 aa27.55■■■□□ 2
UFD1-201ENST00000263202 RBM19Q9Y4C8 960 aaKnown RBP27.55■■■□□ 2
UFD1-201ENST00000263202 POLD1P28340 1107 aa27.54■■■□□ 2
UFD1-201ENST00000263202 IRS2Q9Y4H2 1338 aa27.53■■■□□ 2
UFD1-201ENST00000263202 GOLIM4O00461 696 aa27.53■■■□□ 2
UFD1-201ENST00000263202 MFAP1P55081 439 aaKnown RBP27.53■■■□□ 2
UFD1-201ENST00000263202 FSD1Q9BTV5 496 aa27.53■■■□□ 2
UFD1-201ENST00000263202 SNRKQ9NRH2 765 aa27.53■■■□□ 2
UFD1-201ENST00000263202 PODXL2Q9NZ53 605 aa27.53■■■□□ 2
UFD1-201ENST00000263202 KLRK1P26718 216 aa27.52■■■□□ 2
UFD1-201ENST00000263202 GYG1P46976 350 aa27.52■■■□□ 2
UFD1-201ENST00000263202 FKBP4Q02790 459 aaKnown RBP eCLIP27.52■■■□□ 2
UFD1-201ENST00000263202 NSFL1CQ9UNZ2 370 aaKnown RBP27.52■■■□□ 2
UFD1-201ENST00000263202 MYH13Q9UKX3 1938 aa27.52■■■□□ 2
UFD1-201ENST00000263202 KIAA1551Q9HCM1 1747 aa27.52■■■□□ 2
UFD1-201ENST00000263202 ZAP70P43403 619 aa27.51■■□□□ 1.99
UFD1-201ENST00000263202 CAVIN4Q5BKX8 364 aa27.51■■□□□ 1.99
UFD1-201ENST00000263202 PI16Q6UXB8 463 aa27.51■■□□□ 1.99
UFD1-201ENST00000263202 FAM84BQ96KN1 310 aaPredicted RBP27.51■■□□□ 1.99
UFD1-201ENST00000263202 KBTBD3Q8NAB2 608 aa27.51■■□□□ 1.99
UFD1-201ENST00000263202 CNKSR1Q969H4 720 aa27.51■■□□□ 1.99
UFD1-201ENST00000263202 SGIP1Q9BQI5 828 aa27.51■■□□□ 1.99
UFD1-201ENST00000263202 ESYT1Q9BSJ8 1104 aa27.51■■□□□ 1.99
UFD1-201ENST00000263202 ANTXR1Q9H6X2 564 aa27.51■■□□□ 1.99
UFD1-201ENST00000263202 MYO5AQ9Y4I1 1855 aaKnown RBP27.5■■□□□ 1.99
UFD1-201ENST00000263202 MYH7P12883 1935 aa27.5■■□□□ 1.99
UFD1-201ENST00000263202 RFX7Q2KHR2 1363 aa27.5■■□□□ 1.99
UFD1-201ENST00000263202 ATP2B4P23634 1241 aa27.5■■□□□ 1.99
UFD1-201ENST00000263202 FBXO33Q7Z6M2 555 aa27.5■■□□□ 1.99
UFD1-201ENST00000263202 RASGRF1Q13972 1273 aa27.49■■□□□ 1.99
UFD1-201ENST00000263202 PRPF40BQ6NWY9 871 aaKnown RBP27.49■■□□□ 1.99
UFD1-201ENST00000263202 HMG20BQ9P0W2 317 aa27.49■■□□□ 1.99
UFD1-201ENST00000263202 EIF5BO60841 1220 aaKnown RBP27.48■■□□□ 1.99
UFD1-201ENST00000263202 TXNRD3Q86VQ6 643 aa27.48■■□□□ 1.99
UFD1-201ENST00000263202 UPF2Q9HAU5 1272 aaKnown RBP27.48■■□□□ 1.99
UFD1-201ENST00000263202 DIAPH3Q9NSV4 1193 aa27.48■■□□□ 1.99
UFD1-201ENST00000263202 GGA1Q9UJY5 639 aa27.48■■□□□ 1.99
UFD1-201ENST00000263202 HIP1O00291 1037 aa27.48■■□□□ 1.99
UFD1-201ENST00000263202 C15orf52Q6ZUT6 534 aaKnown RBP27.48■■□□□ 1.99
UFD1-201ENST00000263202 SPATA5Q8NB90 893 aa27.48■■□□□ 1.99
UFD1-201ENST00000263202 DOCK2Q92608 1830 aa27.47■■□□□ 1.99
UFD1-201ENST00000263202 UFL1O94874 794 aa27.47■■□□□ 1.99
UFD1-201ENST00000263202 DUOX1Q9NRD9 1551 aa27.47■■□□□ 1.99
UFD1-201ENST00000263202 CYP2E1P05181 493 aaPredicted RBP27.46■■□□□ 1.99
UFD1-201ENST00000263202 OLFM4Q6UX06 510 aa27.46■■□□□ 1.99
UFD1-201ENST00000263202 VPS37DQ86XT2 251 aa27.46■■□□□ 1.99
UFD1-201ENST00000263202 TBC1D16Q8TBP0 767 aa27.46■■□□□ 1.99
UFD1-201ENST00000263202 GNL3LQ9NVN8 582 aaKnown RBP27.46■■□□□ 1.99
UFD1-201ENST00000263202 POLLQ9UGP5 575 aa27.46■■□□□ 1.99
UFD1-201ENST00000263202 HIBADHP31937 336 aaKnown RBP27.46■■□□□ 1.99
UFD1-201ENST00000263202 CWC27Q6UX04 472 aaKnown RBP27.46■■□□□ 1.99
UFD1-201ENST00000263202 TICAM2Q86XR7 235 aa27.46■■□□□ 1.99
UFD1-201ENST00000263202 IL25Q9H293 177 aa27.46■■□□□ 1.99
UFD1-201ENST00000263202 KCNA3P22001 575 aa27.45■■□□□ 1.98
UFD1-201ENST00000263202 PTGER2P43116 358 aa27.45■■□□□ 1.98
UFD1-201ENST00000263202 A0A0G2JLW4 131 aa27.44■■□□□ 1.98
UFD1-201ENST00000263202 DPEP1P16444 411 aa27.44■■□□□ 1.98
UFD1-201ENST00000263202 GPR101Q96P66 508 aaPredicted RBP27.44■■□□□ 1.98
UFD1-201ENST00000263202 TMX4Q9H1E5 349 aaPredicted RBP27.44■■□□□ 1.98
UFD1-201ENST00000263202 IQSEC3Q9UPP2 1182 aaPredicted RBP27.44■■□□□ 1.98
UFD1-201ENST00000263202 SGSM2O43147 1006 aa27.44■■□□□ 1.98
UFD1-201ENST00000263202 COL1A1P02452 1464 aaPredicted RBP27.44■■□□□ 1.98
UFD1-201ENST00000263202 NMIQ13287 307 aaPredicted RBP27.44■■□□□ 1.98
UFD1-201ENST00000263202 TTF1Q15361 905 aaPredicted RBP27.44■■□□□ 1.98
UFD1-201ENST00000263202 MPNDQ8N594 471 aa27.44■■□□□ 1.98
UFD1-201ENST00000263202 RUFY2Q8WXA3 655 aa27.44■■□□□ 1.98
UFD1-201ENST00000263202 REC8O95072 547 aa27.43■■□□□ 1.98
UFD1-201ENST00000263202 TGFB2P61812 414 aa27.43■■□□□ 1.98
UFD1-201ENST00000263202 C7orf43Q8WVR3 580 aa27.43■■□□□ 1.98
UFD1-201ENST00000263202 FAM227BQ96M60 508 aa27.43■■□□□ 1.98
UFD1-201ENST00000263202 ZBTB22O15209 634 aa27.42■■□□□ 1.98
UFD1-201ENST00000263202 TBC1D32Q96NH3 1257 aa27.42■■□□□ 1.98
UFD1-201ENST00000263202 PIH1D3Q9NQM4 214 aaKnown RBP27.42■■□□□ 1.98
UFD1-201ENST00000263202 BRCA1P38398 1863 aaKnown RBP27.42■■□□□ 1.98
UFD1-201ENST00000263202 MED23Q9ULK4 1368 aa27.42■■□□□ 1.98
UFD1-201ENST00000263202 C6orf229H3BNL8 230 aa27.41■■□□□ 1.98
UFD1-201ENST00000263202 SEMA3EO15041 775 aa27.41■■□□□ 1.98
UFD1-201ENST00000263202 CHGBP05060 677 aa27.41■■□□□ 1.98
UFD1-201ENST00000263202 A0A0D9SFI3 127 aa27.41■■□□□ 1.98
UFD1-201ENST00000263202 DPP8Q6V1X1 898 aaPredicted RBP27.41■■□□□ 1.98
UFD1-201ENST00000263202 TTLL6Q8N841 843 aa27.41■■□□□ 1.98
UFD1-201ENST00000263202 C22orf23Q9BZE7 217 aa27.41■■□□□ 1.98
UFD1-201ENST00000263202 DENND2AQ9ULE3 1009 aa27.41■■□□□ 1.98
UFD1-201ENST00000263202 USP26Q9BXU7 913 aa27.4■■□□□ 1.98
UFD1-201ENST00000263202 ZNF804AQ7Z570 1209 aa27.39■■□□□ 1.98
UFD1-201ENST00000263202 RAD50Q92878 1312 aa27.39■■□□□ 1.97
UFD1-201ENST00000263202 RNF113AO15541 343 aaKnown RBP27.39■■□□□ 1.97
UFD1-201ENST00000263202 ZNF219Q9P2Y4 722 aaPredicted RBP27.39■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms