RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 PRPHP41219 470 aa16.2■□□□□ 0.18
CUX2-201ENST00000261726 DNAJC21Q5F1R6 531 aaKnown RBP16.2■□□□□ 0.18
CUX2-201ENST00000261726 TRIM27P14373 513 aa16.2■□□□□ 0.18
CUX2-201ENST00000261726 STMN4Q9H169 189 aaPredicted RBP16.2■□□□□ 0.18
CUX2-201ENST00000261726 KCNK9Q9NPC2 374 aa16.2■□□□□ 0.18
CUX2-201ENST00000261726 NOL3O60936 208 aaKnown RBP16.19■□□□□ 0.18
CUX2-201ENST00000261726 SNX16P57768 344 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 GTF2A1P52655 376 aaPredicted RBP16.19■□□□□ 0.18
CUX2-201ENST00000261726 TAF12Q16514 161 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 CCDC152Q4G0S7 254 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 OPA1O60313 960 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 ANXA1P04083 346 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 ZSCAN22P10073 491 aaPredicted RBP16.19■□□□□ 0.18
CUX2-201ENST00000261726 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.19■□□□□ 0.18
CUX2-201ENST00000261726 V9GYY5 206 aaPredicted RBP16.19■□□□□ 0.18
CUX2-201ENST00000261726 PTPRKQ15262 1439 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 SBNO2Q9Y2G9 1366 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 CTAGE9A4FU28 777 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 SLU7O95391 586 aaKnown RBP16.19■□□□□ 0.18
CUX2-201ENST00000261726 IFT81Q8WYA0 676 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 CCDC114Q96M63 670 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 PI4KAP2A4QPH2 592 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 MICALL1Q8N3F8 863 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 PI4KAP1Q8N8J0 262 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 FAM169AQ9Y6X4 670 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 CEP57Q86XR8 500 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 KRT222Q8N1A0 295 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 PSMA7O14818 248 aa16.18■□□□□ 0.18
CUX2-201ENST00000261726 CFAP157Q5JU67 520 aa16.18■□□□□ 0.18
CUX2-201ENST00000261726 CCDC121Q6ZUS5 278 aa16.18■□□□□ 0.18
CUX2-201ENST00000261726 GPATCH8Q9UKJ3 1502 aaKnown RBP16.18■□□□□ 0.18
CUX2-201ENST00000261726 UQCRFS1P1P0C7P4 283 aa16.18■□□□□ 0.18
CUX2-201ENST00000261726 UVSSAQ2YD98 709 aa16.18■□□□□ 0.18
CUX2-201ENST00000261726 POGZQ7Z3K3 1410 aa16.18■□□□□ 0.18
CUX2-201ENST00000261726 ATP2B3Q16720 1220 aa16.18■□□□□ 0.18
CUX2-201ENST00000261726 NCBP1Q09161 790 aaKnown RBP16.18■□□□□ 0.18
CUX2-201ENST00000261726 SYT1P21579 422 aa16.18■□□□□ 0.18
CUX2-201ENST00000261726 SP4Q02446 784 aa16.18■□□□□ 0.18
CUX2-201ENST00000261726 TTC22Q5TAA0 569 aa16.18■□□□□ 0.18
CUX2-201ENST00000261726 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.18■□□□□ 0.18
CUX2-201ENST00000261726 PROCA1Q8NCQ7 364 aaPredicted RBP16.17■□□□□ 0.18
CUX2-201ENST00000261726 ESR2Q92731 530 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 TLDC2A0PJX2 215 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 VEZTQ9HBM0 779 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 KARSQ15046 597 aaKnown RBP16.17■□□□□ 0.18
CUX2-201ENST00000261726 PPP1R7Q15435 360 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 Q6ZUG5 572 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 C6orf50Q9HD87 102 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 HDAC9Q9UKV0 1011 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 PHF8Q9UPP1 1060 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 ZEB2O60315 1214 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 RPUSD2Q8IZ73 545 aaKnown RBP16.17■□□□□ 0.18
CUX2-201ENST00000261726 LMBR1Q8WVP7 490 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 TTC14Q96N46 770 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 DNAJC25Q9H1X3 360 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 SEC62Q99442 399 aaKnown RBP16.17■□□□□ 0.18
CUX2-201ENST00000261726 RASA3Q14644 834 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 CCDC186Q7Z3E2 898 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 FAM83GA6ND36 823 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 RBM26Q5T8P6 1007 aaKnown RBP16.16■□□□□ 0.18
CUX2-201ENST00000261726 KCNG4Q8TDN1 519 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 ATP6V0A2Q9Y487 856 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 UBXN1Q04323 297 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 UAP1Q16222 522 aaPredicted RBP16.16■□□□□ 0.18
CUX2-201ENST00000261726 TMX3Q96JJ7 454 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 PPP1R9BQ96SB3 815 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 PLIN2Q99541 437 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 GUCA1BQ9UMX6 200 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 ABCC11Q96J66 1382 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 DYNC1I1O14576 645 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 STX17P56962 302 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 USP48Q86UV5 1035 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 MRPS27Q92552 414 aaKnown RBP16.16■□□□□ 0.18
CUX2-201ENST00000261726 ACSBG1Q96GR2 724 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 TEX13AQ9BXU3 409 aaPredicted RBP16.16■□□□□ 0.18
CUX2-201ENST00000261726 KIF5AQ12840 1032 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 IFNL2Q8IZJ0 200 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 MAK16Q9BXY0 300 aaKnown RBP16.15■□□□□ 0.18
CUX2-201ENST00000261726 PFDN4Q9NQP4 134 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 VPS18Q9P253 973 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 SPDYE3A6NKU9 549 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 GEN1Q17RS7 908 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 NEK11Q8NG66 645 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 IVLP07476 585 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 NUP160Q12769 1436 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 NAA16Q6N069 864 aaPredicted RBP16.15■□□□□ 0.18
CUX2-201ENST00000261726 CCDC65Q8IXS2 484 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 ZMYND15Q9H091 742 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 LZTFL1Q9NQ48 299 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 CPLX4Q7Z7G2 160 aa16.14■□□□□ 0.18
CUX2-201ENST00000261726 GOLGA1Q92805 767 aa16.14■□□□□ 0.18
CUX2-201ENST00000261726 PRIMPOLQ96LW4 560 aa16.14■□□□□ 0.18
CUX2-201ENST00000261726 TRIM7Q9C029 511 aa16.14■□□□□ 0.18
CUX2-201ENST00000261726 CEP83Q9Y592 693 aa16.14■□□□□ 0.18
CUX2-201ENST00000261726 PIK3R4Q99570 1358 aa16.14■□□□□ 0.17
CUX2-201ENST00000261726 CRCPO75575 148 aa16.14■□□□□ 0.17
CUX2-201ENST00000261726 BMP15O95972 392 aa16.14■□□□□ 0.17
CUX2-201ENST00000261726 RHOXF2BP0C7M4 288 aa16.14■□□□□ 0.17
CUX2-201ENST00000261726 MCM7P33993 719 aa16.14■□□□□ 0.17
CUX2-201ENST00000261726 TNNI2P48788 182 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms