RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 HSP90AA1P07900 732 aaKnown RBP26.88■■□□□ 1.89
SIX3-201ENST00000260653 ARID4AP29374 1257 aaPredicted RBP26.88■■□□□ 1.89
SIX3-201ENST00000260653 CNBD1Q8NA66 436 aa26.88■■□□□ 1.89
SIX3-201ENST00000260653 ZNF827Q17R98 1081 aa26.88■■□□□ 1.89
SIX3-201ENST00000260653 ZMYM1Q5SVZ6 1142 aa26.88■■□□□ 1.89
SIX3-201ENST00000260653 TICAM2Q86XR7 235 aa26.88■■□□□ 1.89
SIX3-201ENST00000260653 RNF113AO15541 343 aaKnown RBP26.87■■□□□ 1.89
SIX3-201ENST00000260653 CREB3L3Q68CJ9 461 aa26.86■■□□□ 1.89
SIX3-201ENST00000260653 KCNB2Q92953 911 aa26.86■■□□□ 1.89
SIX3-201ENST00000260653 HELLSQ9NRZ9 838 aa26.86■■□□□ 1.89
SIX3-201ENST00000260653 MINPP1Q9UNW1 487 aa26.86■■□□□ 1.89
SIX3-201ENST00000260653 TNS1Q9HBL0 1735 aaKnown RBP26.85■■□□□ 1.89
SIX3-201ENST00000260653 CYP2E1P05181 493 aaPredicted RBP26.85■■□□□ 1.89
SIX3-201ENST00000260653 UQCRFS1P1P0C7P4 283 aa26.85■■□□□ 1.89
SIX3-201ENST00000260653 PRR5LQ6MZQ0 368 aa26.85■■□□□ 1.89
SIX3-201ENST00000260653 TFCP2L1Q9NZI6 479 aa26.85■■□□□ 1.89
SIX3-201ENST00000260653 TM4SF1P30408 202 aa26.85■■□□□ 1.89
SIX3-201ENST00000260653 DDIT3P35638 169 aa26.85■■□□□ 1.89
SIX3-201ENST00000260653 RPS8P62241 208 aaKnown RBP26.85■■□□□ 1.89
SIX3-201ENST00000260653 MYH7P12883 1935 aa26.85■■□□□ 1.89
SIX3-201ENST00000260653 WTIPA6NIX2 430 aaPredicted RBP26.84■■□□□ 1.89
SIX3-201ENST00000260653 ADCK5Q3MIX3 580 aa26.84■■□□□ 1.89
SIX3-201ENST00000260653 MAST3O60307 1309 aa26.84■■□□□ 1.89
SIX3-201ENST00000260653 SLC27A2O14975 620 aa26.84■■□□□ 1.89
SIX3-201ENST00000260653 MYO5AQ9Y4I1 1855 aaKnown RBP26.84■■□□□ 1.89
SIX3-201ENST00000260653 BCAMP50895 628 aa26.83■■□□□ 1.89
SIX3-201ENST00000260653 AKT1S1Q96B36 256 aa26.83■■□□□ 1.89
SIX3-201ENST00000260653 HMG20BQ9P0W2 317 aa26.83■■□□□ 1.89
SIX3-201ENST00000260653 ZKSCAN1P17029 563 aaPredicted RBP26.83■■□□□ 1.89
SIX3-201ENST00000260653 RASGRF1Q13972 1273 aa26.83■■□□□ 1.89
SIX3-201ENST00000260653 HMGB2P26583 209 aaKnown RBP26.82■■□□□ 1.88
SIX3-201ENST00000260653 NOL8Q76FK4 1167 aaKnown RBP26.82■■□□□ 1.88
SIX3-201ENST00000260653 OSBP2Q969R2 916 aa26.82■■□□□ 1.88
SIX3-201ENST00000260653 CHMP5Q9NZZ3 219 aa26.82■■□□□ 1.88
SIX3-201ENST00000260653 CASTP20810 708 aaKnown RBP26.82■■□□□ 1.88
SIX3-201ENST00000260653 LRRFIP1Q32MZ4 808 aaKnown RBP26.82■■□□□ 1.88
SIX3-201ENST00000260653 JAKMIP1Q96N16 626 aaKnown RBP26.82■■□□□ 1.88
SIX3-201ENST00000260653 PIH1D3Q9NQM4 214 aaKnown RBP26.82■■□□□ 1.88
SIX3-201ENST00000260653 M0R2C6 588 aa26.81■■□□□ 1.88
SIX3-201ENST00000260653 SERPINB2P05120 415 aa26.81■■□□□ 1.88
SIX3-201ENST00000260653 ZFYP08048 801 aaPredicted RBP26.81■■□□□ 1.88
SIX3-201ENST00000260653 CPA1P15085 419 aa26.81■■□□□ 1.88
SIX3-201ENST00000260653 FBXO41Q8TF61 875 aa26.81■■□□□ 1.88
SIX3-201ENST00000260653 TAF6LQ9Y6J9 622 aa26.81■■□□□ 1.88
SIX3-201ENST00000260653 DDR1Q08345 913 aa26.81■■□□□ 1.88
SIX3-201ENST00000260653 NFKBIBQ15653 356 aa26.81■■□□□ 1.88
SIX3-201ENST00000260653 VPS53Q5VIR6 699 aa26.81■■□□□ 1.88
SIX3-201ENST00000260653 SPATA5Q8NB90 893 aa26.81■■□□□ 1.88
SIX3-201ENST00000260653 MCM2P49736 904 aa26.8■■□□□ 1.88
SIX3-201ENST00000260653 WASHC4Q2M389 1173 aa26.8■■□□□ 1.88
SIX3-201ENST00000260653 TTF1Q15361 905 aaPredicted RBP26.8■■□□□ 1.88
SIX3-201ENST00000260653 RNF20Q5VTR2 975 aa26.8■■□□□ 1.88
SIX3-201ENST00000260653 TMX3Q96JJ7 454 aa26.8■■□□□ 1.88
SIX3-201ENST00000260653 TTC14Q96N46 770 aa26.79■■□□□ 1.88
SIX3-201ENST00000260653 UBE4AQ14139 1066 aa26.79■■□□□ 1.88
SIX3-201ENST00000260653 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.79■■□□□ 1.88
SIX3-201ENST00000260653 COL23A1Q86Y22 540 aaPredicted RBP26.78■■□□□ 1.88
SIX3-201ENST00000260653 POLRMTO00411 1230 aaKnown RBP26.78■■□□□ 1.88
SIX3-201ENST00000260653 IDH1O75874 414 aaKnown RBP26.78■■□□□ 1.88
SIX3-201ENST00000260653 TM6SF1Q9BZW5 370 aa26.78■■□□□ 1.88
SIX3-201ENST00000260653 U3KPZ7 1027 aaPredicted RBP26.78■■□□□ 1.88
SIX3-201ENST00000260653 RPAP1Q9BWH6 1393 aaPredicted RBP26.77■■□□□ 1.88
SIX3-201ENST00000260653 APPBP2Q92624 585 aa26.77■■□□□ 1.88
SIX3-201ENST00000260653 ZSWIM6Q9HCJ5 1215 aa26.77■■□□□ 1.88
SIX3-201ENST00000260653 GYG1P46976 350 aa26.77■■□□□ 1.88
SIX3-201ENST00000260653 ST5P78524 1137 aa26.77■■□□□ 1.88
SIX3-201ENST00000260653 SLC9C2Q5TAH2 1124 aa26.77■■□□□ 1.88
SIX3-201ENST00000260653 PUS7LQ9H0K6 701 aaKnown RBP26.77■■□□□ 1.88
SIX3-201ENST00000260653 COL9A3Q14050 684 aaPredicted RBP26.76■■□□□ 1.87
SIX3-201ENST00000260653 DSCC1Q9BVC3 393 aa26.76■■□□□ 1.87
SIX3-201ENST00000260653 HSPD1P10809 573 aaKnown RBP26.76■■□□□ 1.87
SIX3-201ENST00000260653 ADD2P35612 726 aa26.76■■□□□ 1.87
SIX3-201ENST00000260653 IQSEC3Q9UPP2 1182 aaPredicted RBP26.76■■□□□ 1.87
SIX3-201ENST00000260653 ZNF804BA4D1E1 1349 aa26.75■■□□□ 1.87
SIX3-201ENST00000260653 AK2P54819 239 aa26.75■■□□□ 1.87
SIX3-201ENST00000260653 SLC51AQ86UW1 340 aa26.75■■□□□ 1.87
SIX3-201ENST00000260653 ZGPATQ8N5A5 531 aaKnown RBP26.75■■□□□ 1.87
SIX3-201ENST00000260653 IL27Q8NEV9 243 aa26.75■■□□□ 1.87
SIX3-201ENST00000260653 WWC3Q9ULE0 1092 aa26.75■■□□□ 1.87
SIX3-201ENST00000260653 DOCK2Q92608 1830 aa26.74■■□□□ 1.87
SIX3-201ENST00000260653 RGPD3A6NKT7 1758 aaPredicted RBP26.74■■□□□ 1.87
SIX3-201ENST00000260653 RGPD4Q7Z3J3 1758 aa26.74■■□□□ 1.87
SIX3-201ENST00000260653 FRAT2O75474 233 aaPredicted RBP26.74■■□□□ 1.87
SIX3-201ENST00000260653 GRAPQ13588 217 aa26.74■■□□□ 1.87
SIX3-201ENST00000260653 ZSCAN25Q6NSZ9 544 aa26.74■■□□□ 1.87
SIX3-201ENST00000260653 GRAPLQ8TC17 118 aaPredicted RBP26.74■■□□□ 1.87
SIX3-201ENST00000260653 CIZ1Q9ULV3 898 aaPredicted RBP26.74■■□□□ 1.87
SIX3-201ENST00000260653 CYP46A1Q9Y6A2 500 aa26.74■■□□□ 1.87
SIX3-201ENST00000260653 CYP21A2P08686 494 aa26.74■■□□□ 1.87
SIX3-201ENST00000260653 KLRK1P26718 216 aa26.74■■□□□ 1.87
SIX3-201ENST00000260653 TSGA10IPQ3SY00 556 aa26.74■■□□□ 1.87
SIX3-201ENST00000260653 RUFY3Q7L099 469 aa26.74■■□□□ 1.87
SIX3-201ENST00000260653 CRY2Q49AN0 593 aa26.73■■□□□ 1.87
SIX3-201ENST00000260653 ANKRD2Q9GZV1 360 aa26.73■■□□□ 1.87
SIX3-201ENST00000260653 PDE6AP16499 860 aa26.73■■□□□ 1.87
SIX3-201ENST00000260653 RPGRQ92834 1020 aaKnown RBP26.72■■□□□ 1.87
SIX3-201ENST00000260653 PDRG1Q9NUG6 133 aa26.72■■□□□ 1.87
SIX3-201ENST00000260653 PODXL2Q9NZ53 605 aa26.72■■□□□ 1.87
SIX3-201ENST00000260653 ZNF532Q9HCE3 1301 aa26.72■■□□□ 1.87
SIX3-201ENST00000260653 FOXP2O15409 715 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms