RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 SYNE3Q6ZMZ3 975 aa15.8■□□□□ 0.12
VHL-201ENST00000256474 CHMP4CQ96CF2 233 aa15.8■□□□□ 0.12
VHL-201ENST00000256474 ANKARQ7Z5J8 1434 aa15.8■□□□□ 0.12
VHL-201ENST00000256474 NPHP4O75161 1426 aaPredicted RBP15.8■□□□□ 0.12
VHL-201ENST00000256474 SKILP12757 684 aa15.8■□□□□ 0.12
VHL-201ENST00000256474 C8orf76Q96K31 380 aa15.8■□□□□ 0.12
VHL-201ENST00000256474 TMX1Q9H3N1 280 aa15.8■□□□□ 0.12
VHL-201ENST00000256474 FMN2Q9NZ56 1722 aa15.79■□□□□ 0.12
VHL-201ENST00000256474 USP27XA6NNY8 438 aa15.79■□□□□ 0.12
VHL-201ENST00000256474 M0R2C6 588 aa15.79■□□□□ 0.12
VHL-201ENST00000256474 ATP2B3Q16720 1220 aa15.79■□□□□ 0.12
VHL-201ENST00000256474 RRP12Q5JTH9 1297 aaKnown RBP15.79■□□□□ 0.12
VHL-201ENST00000256474 HELBQ8NG08 1087 aaPredicted RBP15.79■□□□□ 0.12
VHL-201ENST00000256474 ORC3Q9UBD5 711 aaPredicted RBP15.79■□□□□ 0.12
VHL-201ENST00000256474 MED23Q9ULK4 1368 aa15.79■□□□□ 0.12
VHL-201ENST00000256474 AIFM3Q96NN9 605 aa15.79■□□□□ 0.12
VHL-201ENST00000256474 RFX5P48382 616 aaPredicted RBP15.79■□□□□ 0.12
VHL-201ENST00000256474 CCDC158Q5M9N0 1113 aa15.79■□□□□ 0.12
VHL-201ENST00000256474 ZNF396Q96N95 335 aaPredicted RBP15.79■□□□□ 0.12
VHL-201ENST00000256474 TPM3P06753 285 aa15.78■□□□□ 0.12
VHL-201ENST00000256474 NFXL1Q6ZNB6 911 aa15.78■□□□□ 0.12
VHL-201ENST00000256474 OSBP2Q969R2 916 aa15.78■□□□□ 0.12
VHL-201ENST00000256474 IL17RAQ96F46 866 aa15.78■□□□□ 0.12
VHL-201ENST00000256474 MYL10Q9BUA6 226 aa15.78■□□□□ 0.12
VHL-201ENST00000256474 CCDC94Q9BW85 323 aaPredicted RBP15.78■□□□□ 0.12
VHL-201ENST00000256474 DENND2AQ9ULE3 1009 aa15.78■□□□□ 0.12
VHL-201ENST00000256474 NBPF26B4DH59 902 aa15.78■□□□□ 0.12
VHL-201ENST00000256474 NBPF14Q5TI25 921 aa15.78■□□□□ 0.12
VHL-201ENST00000256474 NBPF10Q6P3W6 841 aaKnown RBP15.78■□□□□ 0.12
VHL-201ENST00000256474 MICU3Q86XE3 530 aa15.78■□□□□ 0.12
VHL-201ENST00000256474 NBPF15Q8N660 670 aa15.78■□□□□ 0.12
VHL-201ENST00000256474 CLIC4Q9Y696 253 aa15.78■□□□□ 0.12
VHL-201ENST00000256474 MAST3O60307 1309 aa15.78■□□□□ 0.12
VHL-201ENST00000256474 CTDNEP1O95476 244 aa15.78■□□□□ 0.12
VHL-201ENST00000256474 KCNB2Q92953 911 aa15.78■□□□□ 0.12
VHL-201ENST00000256474 ZSCAN16Q9H4T2 348 aaPredicted RBP15.78■□□□□ 0.12
VHL-201ENST00000256474 CCDC69A6NI79 296 aa15.77■□□□□ 0.12
VHL-201ENST00000256474 LMOD1P29536 600 aaPredicted RBP15.77■□□□□ 0.12
VHL-201ENST00000256474 MTERF4Q7Z6M4 381 aaKnown RBP15.77■□□□□ 0.12
VHL-201ENST00000256474 DCAF5Q96JK2 942 aa15.77■□□□□ 0.12
VHL-201ENST00000256474 PRC1O43663 620 aa15.77■□□□□ 0.11
VHL-201ENST00000256474 PDIA3P30101 505 aaKnown RBP15.77■□□□□ 0.11
VHL-201ENST00000256474 ZAP70P43403 619 aa15.77■□□□□ 0.11
VHL-201ENST00000256474 STX1AQ16623 288 aa15.77■□□□□ 0.11
VHL-201ENST00000256474 PLBD2Q8NHP8 589 aa15.77■□□□□ 0.11
VHL-201ENST00000256474 EVA1CP58658 441 aa15.77■□□□□ 0.11
VHL-201ENST00000256474 SCARF1Q14162 830 aa15.77■□□□□ 0.11
VHL-201ENST00000256474 SPECC1Q5M775 1068 aa15.77■□□□□ 0.11
VHL-201ENST00000256474 CEP57L1Q8IYX8 460 aa15.77■□□□□ 0.11
VHL-201ENST00000256474 INCENPQ9NQS7 918 aa15.77■□□□□ 0.11
VHL-201ENST00000256474 ELP1O95163 1332 aa15.76■□□□□ 0.11
VHL-201ENST00000256474 RNF113AO15541 343 aaKnown RBP15.76■□□□□ 0.11
VHL-201ENST00000256474 TMC6Q7Z403 805 aa15.76■□□□□ 0.11
VHL-201ENST00000256474 IMMTQ16891 758 aaKnown RBP15.76■□□□□ 0.11
VHL-201ENST00000256474 METTL24Q5JXM2 366 aa15.76■□□□□ 0.11
VHL-201ENST00000256474 HOMER1Q86YM7 354 aa15.76■□□□□ 0.11
VHL-201ENST00000256474 PHKBQ93100 1093 aa15.76■□□□□ 0.11
VHL-201ENST00000256474 CNNM1Q9NRU3 951 aa15.76■□□□□ 0.11
VHL-201ENST00000256474 SNAP23O00161 211 aa15.76■□□□□ 0.11
VHL-201ENST00000256474 NDUFA8P51970 172 aa15.76■□□□□ 0.11
VHL-201ENST00000256474 CEP135Q66GS9 1140 aa15.76■□□□□ 0.11
VHL-201ENST00000256474 SPTLC3Q9NUV7 552 aa15.76■□□□□ 0.11
VHL-201ENST00000256474 PCDHA7Q9UN72 937 aa15.76■□□□□ 0.11
VHL-201ENST00000256474 TOPAZ1Q8N9V7 1692 aa15.76■□□□□ 0.11
VHL-201ENST00000256474 NALCNQ8IZF0 1738 aa15.75■□□□□ 0.11
VHL-201ENST00000256474 EYA2O00167 538 aa15.75■□□□□ 0.11
VHL-201ENST00000256474 PFKFB2O60825 505 aa15.75■□□□□ 0.11
VHL-201ENST00000256474 TRDNQ13061 729 aa15.75■□□□□ 0.11
VHL-201ENST00000256474 PTPN14Q15678 1187 aa15.75■□□□□ 0.11
VHL-201ENST00000256474 ANO10Q9NW15 660 aa15.75■□□□□ 0.11
VHL-201ENST00000256474 GOLGA8FQ08AF8 430 aa15.75■□□□□ 0.11
VHL-201ENST00000256474 GOLGA8DPQ0D2H9 430 aa15.75■□□□□ 0.11
VHL-201ENST00000256474 XAGE2Q96GT9 111 aa15.75■□□□□ 0.11
VHL-201ENST00000256474 IFNKQ9P0W0 207 aa15.75■□□□□ 0.11
VHL-201ENST00000256474 ADD1P35611 737 aaKnown RBP15.74■□□□□ 0.11
VHL-201ENST00000256474 IL15P40933 162 aaPredicted RBP15.74■□□□□ 0.11
VHL-201ENST00000256474 ATG9AQ7Z3C6 839 aa15.74■□□□□ 0.11
VHL-201ENST00000256474 CREBRFQ8IUR6 639 aa15.74■□□□□ 0.11
VHL-201ENST00000256474 MRPS27Q92552 414 aaKnown RBP15.74■□□□□ 0.11
VHL-201ENST00000256474 ZNF213O14771 459 aa15.74■□□□□ 0.11
VHL-201ENST00000256474 FGAP02671 866 aa15.74■□□□□ 0.11
VHL-201ENST00000256474 HMGB1P09429 215 aaKnown RBP15.74■□□□□ 0.11
VHL-201ENST00000256474 DPCR1Q3MIW9 517 aa15.74■□□□□ 0.11
VHL-201ENST00000256474 PUS7LQ9H0K6 701 aaKnown RBP15.74■□□□□ 0.11
VHL-201ENST00000256474 FOXO4P98177 505 aa15.73■□□□□ 0.11
VHL-201ENST00000256474 LDHAL6AQ6ZMR3 332 aa15.73■□□□□ 0.11
VHL-201ENST00000256474 TDRD7Q8NHU6 1098 aaKnown RBP15.73■□□□□ 0.11
VHL-201ENST00000256474 IQSEC3Q9UPP2 1182 aaPredicted RBP15.73■□□□□ 0.11
VHL-201ENST00000256474 FAM160A1Q05DH4 1040 aa15.73■□□□□ 0.11
VHL-201ENST00000256474 ZKSCAN3Q9BRR0 538 aa15.73■□□□□ 0.11
VHL-201ENST00000256474 UTYO14607 1347 aa15.73■□□□□ 0.11
VHL-201ENST00000256474 RGPD2P0DJD1 1756 aa15.73■□□□□ 0.11
VHL-201ENST00000256474 SLC9C2Q5TAH2 1124 aa15.72■□□□□ 0.11
VHL-201ENST00000256474 USPL1Q5W0Q7 1092 aa15.72■□□□□ 0.11
VHL-201ENST00000256474 CMTR1Q8N1G2 835 aaKnown RBP15.72■□□□□ 0.11
VHL-201ENST00000256474 C19orf44Q9H6X5 657 aa15.72■□□□□ 0.11
VHL-201ENST00000256474 UBE2Q2LH0YL09 131 aa15.72■□□□□ 0.11
VHL-201ENST00000256474 SLC3A2P08195 630 aaKnown RBP15.72■□□□□ 0.11
VHL-201ENST00000256474 IFIT5Q13325 482 aaKnown RBP15.72■□□□□ 0.11
VHL-201ENST00000256474 ZMYM1Q5SVZ6 1142 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms