RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 SNAP23O00161 211 aa11.46□□□□□ -0.58
NIP7-202ENST00000254941 SGSM2O43147 1006 aa11.46□□□□□ -0.58
NIP7-202ENST00000254941 ARID4AP29374 1257 aaPredicted RBP11.46□□□□□ -0.58
NIP7-202ENST00000254941 CCDC102BQ68D86 513 aa11.46□□□□□ -0.58
NIP7-202ENST00000254941 MSL1Q68DK7 614 aa11.46□□□□□ -0.58
NIP7-202ENST00000254941 CWC27Q6UX04 472 aaKnown RBP11.46□□□□□ -0.58
NIP7-202ENST00000254941 KBTBD3Q8NAB2 608 aa11.46□□□□□ -0.58
NIP7-202ENST00000254941 RUFY2Q8WXA3 655 aa11.46□□□□□ -0.58
NIP7-202ENST00000254941 FSD1Q9BTV5 496 aa11.46□□□□□ -0.58
NIP7-202ENST00000254941 ANKRD2Q9GZV1 360 aa11.46□□□□□ -0.58
NIP7-202ENST00000254941 IL25Q9H293 177 aa11.46□□□□□ -0.58
NIP7-202ENST00000254941 COL11A2P13942 1736 aaPredicted RBP11.45□□□□□ -0.58
NIP7-202ENST00000254941 GOLIM4O00461 696 aa11.45□□□□□ -0.58
NIP7-202ENST00000254941 EPB41L2O43491 1005 aaKnown RBP11.45□□□□□ -0.58
NIP7-202ENST00000254941 UQCRFS1P1P0C7P4 283 aa11.45□□□□□ -0.58
NIP7-202ENST00000254941 PHKA1P46020 1223 aa11.45□□□□□ -0.58
NIP7-202ENST00000254941 SCARF1Q14162 830 aa11.45□□□□□ -0.58
NIP7-202ENST00000254941 RBM17Q96I25 401 aaKnown RBP11.45□□□□□ -0.58
NIP7-202ENST00000254941 CRAMP1Q96RY5 1269 aa11.45□□□□□ -0.58
NIP7-202ENST00000254941 LRRC37AA6NMS7 1700 aa11.45□□□□□ -0.58
NIP7-202ENST00000254941 DOCK2Q92608 1830 aa11.45□□□□□ -0.58
NIP7-202ENST00000254941 GOLGB1Q14789 3259 aaKnown RBP11.45□□□□□ -0.58
NIP7-202ENST00000254941 MCAMP43121 646 aa11.44□□□□□ -0.58
NIP7-202ENST00000254941 CACNA1SQ13698 1873 aa11.44□□□□□ -0.58
NIP7-202ENST00000254941 IPO9Q96P70 1041 aaKnown RBP11.44□□□□□ -0.58
NIP7-202ENST00000254941 BBOX1O75936 387 aa11.44□□□□□ -0.58
NIP7-202ENST00000254941 PDE6BP35913 854 aa11.44□□□□□ -0.58
NIP7-202ENST00000254941 FKBP4Q02790 459 aaKnown RBP eCLIP11.44□□□□□ -0.58
NIP7-202ENST00000254941 SNRKQ9NRH2 765 aa11.44□□□□□ -0.58
NIP7-202ENST00000254941 RAD50Q92878 1312 aa11.43□□□□□ -0.58
NIP7-202ENST00000254941 SRGNP10124 158 aa11.43□□□□□ -0.58
NIP7-202ENST00000254941 ZAP70P43403 619 aa11.43□□□□□ -0.58
NIP7-202ENST00000254941 NMIQ13287 307 aaPredicted RBP11.43□□□□□ -0.58
NIP7-202ENST00000254941 SLC16A10Q8TF71 515 aa11.43□□□□□ -0.58
NIP7-202ENST00000254941 DDRGK1Q96HY6 314 aa11.43□□□□□ -0.58
NIP7-202ENST00000254941 FAM227BQ96M60 508 aa11.43□□□□□ -0.58
NIP7-202ENST00000254941 PDGFDQ9GZP0 370 aaPredicted RBP11.43□□□□□ -0.58
NIP7-202ENST00000254941 ANTXR1Q9H6X2 564 aa11.43□□□□□ -0.58
NIP7-202ENST00000254941 ANO2Q9NQ90 1003 aa11.43□□□□□ -0.58
NIP7-202ENST00000254941 ZNF804BA4D1E1 1349 aa11.42□□□□□ -0.58
NIP7-202ENST00000254941 LTBP1Q14766 1721 aa11.42□□□□□ -0.58
NIP7-202ENST00000254941 A0A0D9SFI3 127 aa11.42□□□□□ -0.58
NIP7-202ENST00000254941 WTIPA6NIX2 430 aaPredicted RBP11.42□□□□□ -0.58
NIP7-202ENST00000254941 BCAMP50895 628 aa11.42□□□□□ -0.58
NIP7-202ENST00000254941 PI16Q6UXB8 463 aa11.42□□□□□ -0.58
NIP7-202ENST00000254941 KIF2CQ99661 725 aa11.42□□□□□ -0.58
NIP7-202ENST00000254941 NPR1P16066 1061 aa11.42□□□□□ -0.58
NIP7-202ENST00000254941 KCNJ4P48050 445 aa11.42□□□□□ -0.58
NIP7-202ENST00000254941 RASGRF1Q13972 1273 aa11.42□□□□□ -0.58
NIP7-202ENST00000254941 TTF1Q15361 905 aaPredicted RBP11.42□□□□□ -0.58
NIP7-202ENST00000254941 LRRFIP1Q32MZ4 808 aaKnown RBP11.42□□□□□ -0.58
NIP7-202ENST00000254941 TMC4Q7Z404 712 aa11.42□□□□□ -0.58
NIP7-202ENST00000254941 HMG20BQ9P0W2 317 aa11.42□□□□□ -0.58
NIP7-202ENST00000254941 MED23Q9ULK4 1368 aa11.41□□□□□ -0.58
NIP7-202ENST00000254941 XDHP47989 1333 aa11.41□□□□□ -0.58
NIP7-202ENST00000254941 CYP2E1P05181 493 aaPredicted RBP11.41□□□□□ -0.58
NIP7-202ENST00000254941 CAVIN4Q5BKX8 364 aa11.41□□□□□ -0.58
NIP7-202ENST00000254941 KIAA1211Q6ZU35 1233 aa11.41□□□□□ -0.58
NIP7-202ENST00000254941 SPATA5Q8NB90 893 aa11.41□□□□□ -0.58
NIP7-202ENST00000254941 FAM84BQ96KN1 310 aaPredicted RBP11.41□□□□□ -0.58
NIP7-202ENST00000254941 LSG1Q9H089 658 aaKnown RBP11.41□□□□□ -0.58
NIP7-202ENST00000254941 ANKIB1Q9P2G1 1089 aa11.41□□□□□ -0.58
NIP7-202ENST00000254941 LEMD3Q9Y2U8 911 aa11.41□□□□□ -0.58
NIP7-202ENST00000254941 IRS2Q9Y4H2 1338 aa11.41□□□□□ -0.58
NIP7-202ENST00000254941 ALDH1B1P30837 517 aa11.4□□□□□ -0.58
NIP7-202ENST00000254941 GYG1P46976 350 aa11.4□□□□□ -0.58
NIP7-202ENST00000254941 FBXO33Q7Z6M2 555 aa11.4□□□□□ -0.58
NIP7-202ENST00000254941 MASTLQ96GX5 879 aa11.4□□□□□ -0.58
NIP7-202ENST00000254941 GNL3LQ9NVN8 582 aaKnown RBP11.4□□□□□ -0.58
NIP7-202ENST00000254941 KIF13BQ9NQT8 1826 aa11.4□□□□□ -0.58
NIP7-202ENST00000254941 DLEC1Q9Y238 1755 aa11.4□□□□□ -0.58
NIP7-202ENST00000254941 ZBTB22O15209 634 aa11.4□□□□□ -0.59
NIP7-202ENST00000254941 RNF113AO15541 343 aaKnown RBP11.4□□□□□ -0.59
NIP7-202ENST00000254941 CHGBP05060 677 aa11.4□□□□□ -0.59
NIP7-202ENST00000254941 ZFYP08048 801 aaPredicted RBP11.4□□□□□ -0.59
NIP7-202ENST00000254941 MCMDC2Q4G0Z9 681 aa11.4□□□□□ -0.59
NIP7-202ENST00000254941 ZMYM1Q5SVZ6 1142 aa11.4□□□□□ -0.59
NIP7-202ENST00000254941 HELLSQ9NRZ9 838 aa11.4□□□□□ -0.59
NIP7-202ENST00000254941 PODXL2Q9NZ53 605 aa11.4□□□□□ -0.59
NIP7-202ENST00000254941 CCDC88AQ3V6T2 1871 aa11.39□□□□□ -0.59
NIP7-202ENST00000254941 SLX4Q8IY92 1834 aa11.39□□□□□ -0.59
NIP7-202ENST00000254941 CCDC171Q6TFL3 1326 aa11.39□□□□□ -0.59
NIP7-202ENST00000254941 MCCP23508 829 aa11.39□□□□□ -0.59
NIP7-202ENST00000254941 KLRK1P26718 216 aa11.39□□□□□ -0.59
NIP7-202ENST00000254941 ANAPC15P60006 121 aa11.39□□□□□ -0.59
NIP7-202ENST00000254941 C15orf52Q6ZUT6 534 aaKnown RBP11.39□□□□□ -0.59
NIP7-202ENST00000254941 ZNF589Q86UQ0 364 aaPredicted RBP11.39□□□□□ -0.59
NIP7-202ENST00000254941 SLC51AQ86UW1 340 aa11.39□□□□□ -0.59
NIP7-202ENST00000254941 VPS37DQ86XT2 251 aa11.39□□□□□ -0.59
NIP7-202ENST00000254941 SP8Q8IXZ3 490 aa11.39□□□□□ -0.59
NIP7-202ENST00000254941 UPF1Q92900 1129 aaKnown RBP eCLIP11.39□□□□□ -0.592e-6■■■■□ 24.1
NIP7-202ENST00000254941 IL17RAQ96F46 866 aa11.39□□□□□ -0.59
NIP7-202ENST00000254941 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.39□□□□□ -0.59
NIP7-202ENST00000254941 ATP6V0A2Q9Y487 856 aa11.39□□□□□ -0.59
NIP7-202ENST00000254941 H0YIN7 160 aa11.38□□□□□ -0.59
NIP7-202ENST00000254941 PPEF1O14829 653 aaPredicted RBP11.38□□□□□ -0.59
NIP7-202ENST00000254941 SEMA3EO15041 775 aa11.38□□□□□ -0.59
NIP7-202ENST00000254941 HIBADHP31937 336 aaKnown RBP11.38□□□□□ -0.59
NIP7-202ENST00000254941 HSPA4P34932 840 aa11.38□□□□□ -0.59
NIP7-202ENST00000254941 GPSM2P81274 684 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms