RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 GNPATO15228 680 aa20.1■□□□□ 0.81
FOXA1-201ENST00000250448 ATG9AQ7Z3C6 839 aa20.1■□□□□ 0.81
FOXA1-201ENST00000250448 KCNB2Q92953 911 aa20.1■□□□□ 0.81
FOXA1-201ENST00000250448 NIP7Q9Y221 180 aaKnown RBP eCLIP20.1■□□□□ 0.81
FOXA1-201ENST00000250448 PLCB2Q00722 1185 aa20.1■□□□□ 0.81
FOXA1-201ENST00000250448 ST3GAL1Q11201 340 aa20.1■□□□□ 0.81
FOXA1-201ENST00000250448 ECHDC1Q9NTX5 307 aa20.1■□□□□ 0.81
FOXA1-201ENST00000250448 VPS37CA5D8V6 355 aaPredicted RBP20.09■□□□□ 0.81
FOXA1-201ENST00000250448 TRIM37O94972 964 aa20.09■□□□□ 0.81
FOXA1-201ENST00000250448 CCDC57Q2TAC2 916 aa20.09■□□□□ 0.81
FOXA1-201ENST00000250448 GREM2Q9H772 168 aa20.09■□□□□ 0.81
FOXA1-201ENST00000250448 SRP68Q9UHB9 627 aaKnown RBP20.09■□□□□ 0.81
FOXA1-201ENST00000250448 NDUFB9Q9Y6M9 179 aa20.09■□□□□ 0.81
FOXA1-201ENST00000250448 SBF2Q86WG5 1849 aa20.09■□□□□ 0.81
FOXA1-201ENST00000250448 ANKRD36CQ5JPF3 1778 aa20.09■□□□□ 0.81
FOXA1-201ENST00000250448 KRT27Q7Z3Y8 459 aa20.09■□□□□ 0.81
FOXA1-201ENST00000250448 NAP1L2Q9ULW6 460 aaPredicted RBP20.09■□□□□ 0.81
FOXA1-201ENST00000250448 AP5Z1O43299 807 aa20.09■□□□□ 0.81
FOXA1-201ENST00000250448 TNNI3KQ59H18 835 aa20.09■□□□□ 0.81
FOXA1-201ENST00000250448 FPGT-TNNI3KV9GXZ4 949 aa20.09■□□□□ 0.81
FOXA1-201ENST00000250448 DTNBO60941 627 aa20.08■□□□□ 0.81
FOXA1-201ENST00000250448 CCDC94Q9BW85 323 aaPredicted RBP20.08■□□□□ 0.81
FOXA1-201ENST00000250448 BOLA2Q9H3K6 86 aa20.08■□□□□ 0.81
FOXA1-201ENST00000250448 DBNLQ9UJU6 430 aaKnown RBP20.08■□□□□ 0.81
FOXA1-201ENST00000250448 BRWD3Q6RI45 1802 aa20.08■□□□□ 0.81
FOXA1-201ENST00000250448 TTLL11Q8NHH1 800 aa20.08■□□□□ 0.8
FOXA1-201ENST00000250448 GPATCH3Q96I76 525 aa20.08■□□□□ 0.8
FOXA1-201ENST00000250448 TPM3P06753 285 aa20.07■□□□□ 0.8
FOXA1-201ENST00000250448 TIMM10P62072 90 aa20.07■□□□□ 0.8
FOXA1-201ENST00000250448 ME3Q16798 604 aa20.07■□□□□ 0.8
FOXA1-201ENST00000250448 SMAP1Q8IYB5 467 aaPredicted RBP20.07■□□□□ 0.8
FOXA1-201ENST00000250448 DBNDD2Q9BQY9 259 aa20.07■□□□□ 0.8
FOXA1-201ENST00000250448 LRRC4BQ9NT99 713 aa20.07■□□□□ 0.8
FOXA1-201ENST00000250448 CCDC171Q6TFL3 1326 aa20.07■□□□□ 0.8
FOXA1-201ENST00000250448 RREB1Q92766 1687 aa20.07■□□□□ 0.8
FOXA1-201ENST00000250448 CCDC192P0DO97 292 aa20.07■□□□□ 0.8
FOXA1-201ENST00000250448 ZNF710Q8N1W2 664 aa20.07■□□□□ 0.8
FOXA1-201ENST00000250448 TSC1Q92574 1164 aa20.07■□□□□ 0.8
FOXA1-201ENST00000250448 NEUROD6Q96NK8 337 aa20.07■□□□□ 0.8
FOXA1-201ENST00000250448 CTSWP56202 376 aa20.06■□□□□ 0.8
FOXA1-201ENST00000250448 EDC3Q96F86 508 aaKnown RBP20.06■□□□□ 0.8
FOXA1-201ENST00000250448 KCNF1Q9H3M0 494 aa20.06■□□□□ 0.8
FOXA1-201ENST00000250448 EYA2O00167 538 aa20.06■□□□□ 0.8
FOXA1-201ENST00000250448 IFIT5Q13325 482 aaKnown RBP20.06■□□□□ 0.8
FOXA1-201ENST00000250448 KIAA1524Q8TCG1 905 aa20.06■□□□□ 0.8
FOXA1-201ENST00000250448 CSF1RP07333 972 aa20.05■□□□□ 0.8
FOXA1-201ENST00000250448 ITGA6P23229 1130 aa20.05■□□□□ 0.8
FOXA1-201ENST00000250448 NECTIN1Q15223 517 aa20.05■□□□□ 0.8
FOXA1-201ENST00000250448 USPL1Q5W0Q7 1092 aa20.05■□□□□ 0.8
FOXA1-201ENST00000250448 NECAB1Q8N987 351 aa20.05■□□□□ 0.8
FOXA1-201ENST00000250448 CDHR2Q9BYE9 1310 aa20.05■□□□□ 0.8
FOXA1-201ENST00000250448 CNTNAP4Q9C0A0 1308 aa20.05■□□□□ 0.8
FOXA1-201ENST00000250448 ZKSCAN1P17029 563 aaPredicted RBP20.05■□□□□ 0.8
FOXA1-201ENST00000250448 EVI5LQ96CN4 794 aa20.05■□□□□ 0.8
FOXA1-201ENST00000250448 PLA2G12BQ9BX93 195 aa20.05■□□□□ 0.8
FOXA1-201ENST00000250448 UTP14AQ9BVJ6 771 aaKnown RBP20.05■□□□□ 0.8
FOXA1-201ENST00000250448 PYCARDQ9ULZ3 195 aa20.05■□□□□ 0.8
FOXA1-201ENST00000250448 KIF3AQ9Y496 699 aa20.05■□□□□ 0.8
FOXA1-201ENST00000250448 RBM8AQ9Y5S9 174 aaKnown RBP20.05■□□□□ 0.8
FOXA1-201ENST00000250448 CICQ96RK0 1608 aaPredicted RBP20.04■□□□□ 0.8
FOXA1-201ENST00000250448 KRT85P78386 507 aa20.04■□□□□ 0.8
FOXA1-201ENST00000250448 TTC6Q86TZ1 520 aa20.04■□□□□ 0.8
FOXA1-201ENST00000250448 GOLGA6L6A8MZA4 724 aa20.04■□□□□ 0.8
FOXA1-201ENST00000250448 CREB3L3Q68CJ9 461 aa20.04■□□□□ 0.8
FOXA1-201ENST00000250448 CCDC24Q8N4L8 307 aa20.04■□□□□ 0.8
FOXA1-201ENST00000250448 SH3TC1Q8TE82 1336 aa20.04■□□□□ 0.8
FOXA1-201ENST00000250448 BCL2L12Q9HB09 334 aa20.03■□□□□ 0.8
FOXA1-201ENST00000250448 PRDM4Q9UKN5 801 aa20.03■□□□□ 0.8
FOXA1-201ENST00000250448 TPCN1Q9ULQ1 816 aa20.03■□□□□ 0.8
FOXA1-201ENST00000250448 PDE8AO60658 829 aa20.03■□□□□ 0.8
FOXA1-201ENST00000250448 RPS6KA4O75676 772 aa20.03■□□□□ 0.8
FOXA1-201ENST00000250448 LARP1BQ659C4 914 aaKnown RBP20.03■□□□□ 0.8
FOXA1-201ENST00000250448 TBC1D9BQ66K14 1250 aa20.03■□□□□ 0.8
FOXA1-201ENST00000250448 FAM196AQ6ZSG2 479 aa20.03■□□□□ 0.8
FOXA1-201ENST00000250448 SPC24Q8NBT2 197 aa20.03■□□□□ 0.8
FOXA1-201ENST00000250448 IL15P40933 162 aaPredicted RBP20.02■□□□□ 0.8
FOXA1-201ENST00000250448 FAM200AQ8TCP9 573 aa20.02■□□□□ 0.8
FOXA1-201ENST00000250448 NUP62CLQ9H1M0 184 aa20.02■□□□□ 0.8
FOXA1-201ENST00000250448 ELP1O95163 1332 aa20.02■□□□□ 0.8
FOXA1-201ENST00000250448 NTSR2O95665 410 aa20.02■□□□□ 0.8
FOXA1-201ENST00000250448 KCNJ4P48050 445 aa20.02■□□□□ 0.8
FOXA1-201ENST00000250448 MAP3K11Q16584 847 aa20.02■□□□□ 0.8
FOXA1-201ENST00000250448 CDC37L1Q7L3B6 337 aa20.02■□□□□ 0.8
FOXA1-201ENST00000250448 RTCBQ9Y3I0 505 aaKnown RBP20.02■□□□□ 0.8
FOXA1-201ENST00000250448 ARHGEF1Q92888 912 aaKnown RBP20.01■□□□□ 0.79
FOXA1-201ENST00000250448 SEC31BQ9NQW1 1179 aa20.01■□□□□ 0.79
FOXA1-201ENST00000250448 LDHAL6AQ6ZMR3 332 aa20.01■□□□□ 0.79
FOXA1-201ENST00000250448 ZNF652Q9Y2D9 606 aa20.01■□□□□ 0.79
FOXA1-201ENST00000250448 HIP1O00291 1037 aa20.01■□□□□ 0.79
FOXA1-201ENST00000250448 RBM6P78332 1123 aaKnown RBP20.01■□□□□ 0.79
FOXA1-201ENST00000250448 NMIQ13287 307 aaPredicted RBP20.01■□□□□ 0.79
FOXA1-201ENST00000250448 BBXQ8WY36 941 aaPredicted RBP20.01■□□□□ 0.79
FOXA1-201ENST00000250448 LIG1P18858 919 aa20■□□□□ 0.79
FOXA1-201ENST00000250448 PSMA5P28066 241 aa20■□□□□ 0.79
FOXA1-201ENST00000250448 TYRO3Q06418 890 aa20■□□□□ 0.79
FOXA1-201ENST00000250448 FERMT3Q86UX7 667 aa20■□□□□ 0.79
FOXA1-201ENST00000250448 MAP4K1Q92918 833 aa20■□□□□ 0.79
FOXA1-201ENST00000250448 FAM227BQ96M60 508 aa20■□□□□ 0.79
FOXA1-201ENST00000250448 DNAJC2Q99543 621 aaKnown RBP20■□□□□ 0.79
FOXA1-201ENST00000250448 MRVI1Q9Y6F6 885 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms