RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 LDHAL6AQ6ZMR3 332 aa26.62■■□□□ 1.85
HCFC1R1-201ENST00000248089 USP17L1Q7RTZ2 530 aa26.62■■□□□ 1.85
HCFC1R1-201ENST00000248089 JMYQ8N9B5 988 aa26.62■■□□□ 1.85
HCFC1R1-201ENST00000248089 EGFRP00533 1210 aa26.61■■□□□ 1.85
HCFC1R1-201ENST00000248089 RARSP54136 660 aaKnown RBP26.61■■□□□ 1.85
HCFC1R1-201ENST00000248089 GLIS2Q9BZE0 524 aaPredicted RBP26.61■■□□□ 1.85
HCFC1R1-201ENST00000248089 COA1Q9GZY4 146 aa26.61■■□□□ 1.85
HCFC1R1-201ENST00000248089 ZNF609O15014 1411 aa26.6■■□□□ 1.85
HCFC1R1-201ENST00000248089 SNAP23O00161 211 aa26.6■■□□□ 1.85
HCFC1R1-201ENST00000248089 PLIN1O60240 522 aa26.6■■□□□ 1.85
HCFC1R1-201ENST00000248089 ZC3H15Q8WU90 426 aaKnown RBP26.6■■□□□ 1.85
HCFC1R1-201ENST00000248089 CNTNAP1P78357 1384 aa26.59■■□□□ 1.85
HCFC1R1-201ENST00000248089 KIF4BQ2VIQ3 1234 aa26.59■■□□□ 1.85
HCFC1R1-201ENST00000248089 AGBL3Q8NEM8 1001 aa26.59■■□□□ 1.85
HCFC1R1-201ENST00000248089 USP44Q9H0E7 712 aa26.59■■□□□ 1.85
HCFC1R1-201ENST00000248089 ABT1Q9ULW3 272 aaKnown RBP26.59■■□□□ 1.85
HCFC1R1-201ENST00000248089 ANKRD44Q8N8A2 993 aa26.58■■□□□ 1.85
HCFC1R1-201ENST00000248089 API5Q9BZZ5 524 aaKnown RBP26.58■■□□□ 1.85
HCFC1R1-201ENST00000248089 PGAP2Q9UHJ9 254 aa26.58■■□□□ 1.85
HCFC1R1-201ENST00000248089 KIF16BQ96L93 1317 aa26.58■■□□□ 1.85
HCFC1R1-201ENST00000248089 RABL6Q3YEC7 729 aaPredicted RBP26.57■■□□□ 1.84
HCFC1R1-201ENST00000248089 MXD3Q9BW11 206 aa26.57■■□□□ 1.84
HCFC1R1-201ENST00000248089 BRPF1P55201 1214 aaPredicted RBP26.56■■□□□ 1.84
HCFC1R1-201ENST00000248089 USP17L8P0C7I0 530 aa26.55■■□□□ 1.84
HCFC1R1-201ENST00000248089 DACT2Q5SW24 774 aa26.55■■□□□ 1.84
HCFC1R1-201ENST00000248089 PUS3Q9BZE2 481 aaKnown RBP26.55■■□□□ 1.84
HCFC1R1-201ENST00000248089 ZNF408Q9H9D4 720 aa26.55■■□□□ 1.84
HCFC1R1-201ENST00000248089 ZNF280AP59817 542 aaPredicted RBP26.54■■□□□ 1.84
HCFC1R1-201ENST00000248089 CDC37L1Q7L3B6 337 aa26.54■■□□□ 1.84
HCFC1R1-201ENST00000248089 GMLQ99445 158 aa26.54■■□□□ 1.84
HCFC1R1-201ENST00000248089 CELF2O95319 508 aaKnown RBP26.53■■□□□ 1.84
HCFC1R1-201ENST00000248089 STRIP1Q5VSL9 837 aa26.53■■□□□ 1.84
HCFC1R1-201ENST00000248089 CST9Q5W186 159 aa26.53■■□□□ 1.84
HCFC1R1-201ENST00000248089 ZNF804AQ7Z570 1209 aa26.53■■□□□ 1.84
HCFC1R1-201ENST00000248089 USP48Q86UV5 1035 aa26.53■■□□□ 1.84
HCFC1R1-201ENST00000248089 DCPSQ96C86 337 aaKnown RBP26.53■■□□□ 1.84
HCFC1R1-201ENST00000248089 CD209Q9NNX6 404 aa26.53■■□□□ 1.84
HCFC1R1-201ENST00000248089 GGA3Q9NZ52 723 aa26.53■■□□□ 1.84
HCFC1R1-201ENST00000248089 IRS2Q9Y4H2 1338 aa26.53■■□□□ 1.84
HCFC1R1-201ENST00000248089 UBTFL1P0CB47 393 aaPredicted RBP26.52■■□□□ 1.84
HCFC1R1-201ENST00000248089 GTF2IP78347 998 aa26.52■■□□□ 1.84
HCFC1R1-201ENST00000248089 TTLL5Q6EMB2 1281 aa26.52■■□□□ 1.84
HCFC1R1-201ENST00000248089 KRT26Q7Z3Y9 468 aa26.52■■□□□ 1.84
HCFC1R1-201ENST00000248089 MYO3BQ8WXR4 1341 aa26.52■■□□□ 1.84
HCFC1R1-201ENST00000248089 MYOZ2Q9NPC6 264 aa26.52■■□□□ 1.84
HCFC1R1-201ENST00000248089 ASTN2O75129 1339 aaPredicted RBP26.51■■□□□ 1.83
HCFC1R1-201ENST00000248089 RASSF10A6NK89 507 aa26.51■■□□□ 1.83
HCFC1R1-201ENST00000248089 VEGFBP49765 207 aa26.51■■□□□ 1.83
HCFC1R1-201ENST00000248089 C15orf52Q6ZUT6 534 aaKnown RBP26.51■■□□□ 1.83
HCFC1R1-201ENST00000248089 PAXIP1Q6ZW49 1069 aaPredicted RBP26.51■■□□□ 1.83
HCFC1R1-201ENST00000248089 KLHDC4Q8TBB5 520 aa26.51■■□□□ 1.83
HCFC1R1-201ENST00000248089 MROH5Q6ZUA9 1318 aa26.5■■□□□ 1.83
HCFC1R1-201ENST00000248089 ADM5C9JUS6 153 aa26.5■■□□□ 1.83
HCFC1R1-201ENST00000248089 DEFB115Q30KQ5 88 aa26.5■■□□□ 1.83
HCFC1R1-201ENST00000248089 LRRC24Q50LG9 513 aa26.5■■□□□ 1.83
HCFC1R1-201ENST00000248089 DLK2Q6UY11 383 aa26.5■■□□□ 1.83
HCFC1R1-201ENST00000248089 FRAT1Q92837 279 aaPredicted RBP26.5■■□□□ 1.83
HCFC1R1-201ENST00000248089 BCAR3O75815 825 aa26.49■■□□□ 1.83
HCFC1R1-201ENST00000248089 SCARF1Q14162 830 aa26.49■■□□□ 1.83
HCFC1R1-201ENST00000248089 METTL24Q5JXM2 366 aa26.49■■□□□ 1.83
HCFC1R1-201ENST00000248089 OGFOD1Q8N543 542 aa26.49■■□□□ 1.83
HCFC1R1-201ENST00000248089 RIPOR2Q9Y4F9 1068 aa26.49■■□□□ 1.83
HCFC1R1-201ENST00000248089 HSPA1AP0DMV8 641 aaKnown RBP26.48■■□□□ 1.83
HCFC1R1-201ENST00000248089 HSPA1BP0DMV9 641 aaKnown RBP26.48■■□□□ 1.83
HCFC1R1-201ENST00000248089 KIAA0825Q8IV33 1275 aa26.48■■□□□ 1.83
HCFC1R1-201ENST00000248089 ARHGAP45Q92619 1136 aa26.48■■□□□ 1.83
HCFC1R1-201ENST00000248089 GRM1Q13255 1194 aa26.47■■□□□ 1.83
HCFC1R1-201ENST00000248089 UBE4AQ14139 1066 aa26.47■■□□□ 1.83
HCFC1R1-201ENST00000248089 ANGEL2Q5VTE6 544 aaKnown RBP26.47■■□□□ 1.83
HCFC1R1-201ENST00000248089 SULF1Q8IWU6 871 aa26.47■■□□□ 1.83
HCFC1R1-201ENST00000248089 TLL2Q9Y6L7 1015 aa26.47■■□□□ 1.83
HCFC1R1-201ENST00000248089 ZBED9Q6R2W3 1325 aa26.46■■□□□ 1.83
HCFC1R1-201ENST00000248089 ARAP2Q8WZ64 1704 aa26.46■■□□□ 1.83
HCFC1R1-201ENST00000248089 IPO8O15397 1037 aaKnown RBP26.46■■□□□ 1.83
HCFC1R1-201ENST00000248089 MEIS3Q99687 375 aa26.46■■□□□ 1.83
HCFC1R1-201ENST00000248089 JAG2Q9Y219 1238 aa26.46■■□□□ 1.83
HCFC1R1-201ENST00000248089 LRRFIP2Q9Y608 721 aaKnown RBP26.46■■□□□ 1.83
HCFC1R1-201ENST00000248089 TRIM27P14373 513 aa26.45■■□□□ 1.82
HCFC1R1-201ENST00000248089 IL1R1P14778 569 aa26.45■■□□□ 1.82
HCFC1R1-201ENST00000248089 GYG1P46976 350 aa26.45■■□□□ 1.82
HCFC1R1-201ENST00000248089 WDR33Q9C0J8 1336 aaKnown RBP26.44■■□□□ 1.82
HCFC1R1-201ENST00000248089 INTS3Q68E01 1043 aaKnown RBP26.44■■□□□ 1.82
HCFC1R1-201ENST00000248089 ATF7IPQ6VMQ6 1270 aa26.44■■□□□ 1.82
HCFC1R1-201ENST00000248089 HDAC9Q9UKV0 1011 aa26.44■■□□□ 1.82
HCFC1R1-201ENST00000248089 TNNQ9UQP3 1299 aa26.44■■□□□ 1.82
HCFC1R1-201ENST00000248089 MYH13Q9UKX3 1938 aa26.43■■□□□ 1.82
HCFC1R1-201ENST00000248089 THSD7BQ9C0I4 1608 aa26.43■■□□□ 1.82
HCFC1R1-201ENST00000248089 SASH1O94885 1247 aa26.43■■□□□ 1.82
HCFC1R1-201ENST00000248089 NBPF9Q3BBW0 867 aa26.43■■□□□ 1.82
HCFC1R1-201ENST00000248089 CYP4F22Q6NT55 531 aa26.43■■□□□ 1.82
HCFC1R1-201ENST00000248089 CLUAP1Q96AJ1 413 aa26.43■■□□□ 1.82
HCFC1R1-201ENST00000248089 CAPNS2Q96L46 248 aa26.43■■□□□ 1.82
HCFC1R1-201ENST00000248089 ECM29Q5VYK3 1845 aa26.43■■□□□ 1.82
HCFC1R1-201ENST00000248089 HIBADHP31937 336 aaKnown RBP26.42■■□□□ 1.82
HCFC1R1-201ENST00000248089 RFX5P48382 616 aaPredicted RBP26.42■■□□□ 1.82
HCFC1R1-201ENST00000248089 SAPCD2Q86UD0 394 aa26.42■■□□□ 1.82
HCFC1R1-201ENST00000248089 CERS5Q8N5B7 392 aa26.42■■□□□ 1.82
HCFC1R1-201ENST00000248089 HDAC5Q9UQL6 1122 aa26.42■■□□□ 1.82
HCFC1R1-201ENST00000248089 F8W031 263 aaPredicted RBP26.41■■□□□ 1.82
HCFC1R1-201ENST00000248089 VPS37DQ86XT2 251 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms