RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 GUCY1B3Q02153 619 aa14.09□□□□□ -0.15
SEC61A1-201ENST00000243253 LLPHQ9BRT6 129 aaKnown RBP14.09□□□□□ -0.15
SEC61A1-201ENST00000243253 FTOQ9C0B1 505 aaKnown RBP eCLIP14.09□□□□□ -0.15
SEC61A1-201ENST00000243253 AKAP11Q9UKA4 1901 aa14.09□□□□□ -0.15
SEC61A1-201ENST00000243253 EVCP57679 992 aa14.09□□□□□ -0.15
SEC61A1-201ENST00000243253 ZSCAN16Q9H4T2 348 aaPredicted RBP14.09□□□□□ -0.15
SEC61A1-201ENST00000243253 ATG9AQ7Z3C6 839 aa14.08□□□□□ -0.15
SEC61A1-201ENST00000243253 NBPF11Q86T75 865 aa14.08□□□□□ -0.15
SEC61A1-201ENST00000243253 LRRC8AQ8IWT6 810 aa14.08□□□□□ -0.15
SEC61A1-201ENST00000243253 MRFAP1L1Q96HT8 127 aa14.08□□□□□ -0.15
SEC61A1-201ENST00000243253 ZNF165P49910 485 aa14.08□□□□□ -0.16
SEC61A1-201ENST00000243253 CCZ1BP86790 482 aa14.08□□□□□ -0.16
SEC61A1-201ENST00000243253 CCZ1P86791 482 aaPredicted RBP14.08□□□□□ -0.16
SEC61A1-201ENST00000243253 FOXO4P98177 505 aa14.08□□□□□ -0.16
SEC61A1-201ENST00000243253 KRT32Q14532 448 aa14.08□□□□□ -0.16
SEC61A1-201ENST00000243253 NAA16Q6N069 864 aaPredicted RBP14.08□□□□□ -0.16
SEC61A1-201ENST00000243253 DDX46Q7L014 1031 aaKnown RBP14.08□□□□□ -0.16
SEC61A1-201ENST00000243253 COPS6Q7L5N1 327 aa14.08□□□□□ -0.16
SEC61A1-201ENST00000243253 TTC5Q8N0Z6 440 aa14.08□□□□□ -0.16
SEC61A1-201ENST00000243253 ZBTB3Q9H5J0 574 aa14.08□□□□□ -0.16
SEC61A1-201ENST00000243253 USP27XA6NNY8 438 aa14.08□□□□□ -0.16
SEC61A1-201ENST00000243253 HSPA2P54652 639 aa14.08□□□□□ -0.16
SEC61A1-201ENST00000243253 ARID5BQ14865 1188 aa14.08□□□□□ -0.16
SEC61A1-201ENST00000243253 ANKLE2Q86XL3 938 aa14.08□□□□□ -0.16
SEC61A1-201ENST00000243253 XAGE3Q8WTP9 111 aa14.08□□□□□ -0.16
SEC61A1-201ENST00000243253 MYO5AQ9Y4I1 1855 aaKnown RBP14.08□□□□□ -0.16
SEC61A1-201ENST00000243253 GOLGA6L6A8MZA4 724 aa14.07□□□□□ -0.16
SEC61A1-201ENST00000243253 KCPQ6ZWJ8 1503 aa14.07□□□□□ -0.16
SEC61A1-201ENST00000243253 CAVIN2O95810 425 aa14.07□□□□□ -0.16
SEC61A1-201ENST00000243253 FDPSP14324 419 aaKnown RBP14.07□□□□□ -0.16
SEC61A1-201ENST00000243253 DBNDD2Q9BQY9 259 aa14.07□□□□□ -0.16
SEC61A1-201ENST00000243253 CTNNA3Q9UI47 895 aa14.07□□□□□ -0.16
SEC61A1-201ENST00000243253 SMTNL1A8MU46 457 aa14.07□□□□□ -0.16
SEC61A1-201ENST00000243253 DDX58O95786 925 aaKnown RBP14.07□□□□□ -0.16
SEC61A1-201ENST00000243253 MCMDC2Q4G0Z9 681 aa14.07□□□□□ -0.16
SEC61A1-201ENST00000243253 TICAM2Q86XR7 235 aa14.07□□□□□ -0.16
SEC61A1-201ENST00000243253 PRDM10Q9NQV6 1147 aa14.07□□□□□ -0.16
SEC61A1-201ENST00000243253 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.06□□□□□ -0.16
SEC61A1-201ENST00000243253 PHKG2P15735 406 aa14.06□□□□□ -0.16
SEC61A1-201ENST00000243253 DRC7Q8IY82 874 aa14.06□□□□□ -0.16
SEC61A1-201ENST00000243253 ZNF496Q96IT1 587 aaPredicted RBP14.06□□□□□ -0.16
SEC61A1-201ENST00000243253 U3KPZ7 1027 aaPredicted RBP14.06□□□□□ -0.16
SEC61A1-201ENST00000243253 STRCP1A6NGW2 1772 aa14.06□□□□□ -0.16
SEC61A1-201ENST00000243253 U2AF2P26368 475 aaKnown RBP eCLIP14.05□□□□□ -0.16
SEC61A1-201ENST00000243253 NEXNQ0ZGT2 675 aa14.05□□□□□ -0.16
SEC61A1-201ENST00000243253 NAA30Q147X3 362 aaPredicted RBP14.05□□□□□ -0.16
SEC61A1-201ENST00000243253 A0A087WWV3 80 aa14.05□□□□□ -0.16
SEC61A1-201ENST00000243253 KBTBD3Q8NAB2 608 aa14.05□□□□□ -0.16
SEC61A1-201ENST00000243253 USP28Q96RU2 1077 aa14.05□□□□□ -0.16
SEC61A1-201ENST00000243253 KRT28Q7Z3Y7 464 aa14.04□□□□□ -0.16
SEC61A1-201ENST00000243253 FMR1NBQ8N0W7 255 aaPredicted RBP14.04□□□□□ -0.16
SEC61A1-201ENST00000243253 PDCL2Q8N4E4 241 aa14.04□□□□□ -0.16
SEC61A1-201ENST00000243253 DSCC1Q9BVC3 393 aa14.04□□□□□ -0.16
SEC61A1-201ENST00000243253 CBX1P83916 185 aa14.04□□□□□ -0.16
SEC61A1-201ENST00000243253 GORABQ5T7V8 394 aa14.04□□□□□ -0.16
SEC61A1-201ENST00000243253 CLIP2Q9UDT6 1046 aa14.04□□□□□ -0.16
SEC61A1-201ENST00000243253 ANKRD13DQ6ZTN6 518 aa14.04□□□□□ -0.16
SEC61A1-201ENST00000243253 DHX32Q7L7V1 743 aaKnown RBP14.04□□□□□ -0.16
SEC61A1-201ENST00000243253 ZMYM1Q5SVZ6 1142 aa14.03□□□□□ -0.16
SEC61A1-201ENST00000243253 C16orf45Q96MC5 204 aaPredicted RBP14.03□□□□□ -0.16
SEC61A1-201ENST00000243253 HSD3B7Q9H2F3 369 aa14.03□□□□□ -0.16
SEC61A1-201ENST00000243253 TOGARAM1Q9Y4F4 1720 aa14.03□□□□□ -0.16
SEC61A1-201ENST00000243253 ERCC4Q92889 916 aaPredicted RBP14.03□□□□□ -0.16
SEC61A1-201ENST00000243253 TRIM5Q9C035 493 aa14.03□□□□□ -0.16
SEC61A1-201ENST00000243253 CFAP45Q9UL16 551 aa14.03□□□□□ -0.16
SEC61A1-201ENST00000243253 C1orf167Q5SNV9 1468 aa14.03□□□□□ -0.16
SEC61A1-201ENST00000243253 CARMIL3Q8ND23 1372 aa14.03□□□□□ -0.16
SEC61A1-201ENST00000243253 H7C1W4 665 aa14.03□□□□□ -0.16
SEC61A1-201ENST00000243253 PDIA3P30101 505 aaKnown RBP14.03□□□□□ -0.16
SEC61A1-201ENST00000243253 CCT2P78371 535 aaKnown RBP14.03□□□□□ -0.16
SEC61A1-201ENST00000243253 HAND2P61296 217 aa14.02□□□□□ -0.16
SEC61A1-201ENST00000243253 FKBP4Q02790 459 aaKnown RBP eCLIP14.02□□□□□ -0.16
SEC61A1-201ENST00000243253 ATL3Q6DD88 541 aa14.02□□□□□ -0.16
SEC61A1-201ENST00000243253 ZNF594Q96JF6 807 aaPredicted RBP14.02□□□□□ -0.16
SEC61A1-201ENST00000243253 HELLSQ9NRZ9 838 aa14.02□□□□□ -0.16
SEC61A1-201ENST00000243253 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.02□□□□□ -0.16
SEC61A1-201ENST00000243253 PAXBP1Q9Y5B6 917 aa14.02□□□□□ -0.16
SEC61A1-201ENST00000243253 PTPDC1A2A3K4 754 aa14.02□□□□□ -0.17
SEC61A1-201ENST00000243253 GTPBP4Q9BZE4 634 aaKnown RBP14.02□□□□□ -0.17
SEC61A1-201ENST00000243253 A0A087WZG4 1122 aa14.02□□□□□ -0.17
SEC61A1-201ENST00000243253 E7EWF7 191 aa14.02□□□□□ -0.17
SEC61A1-201ENST00000243253 HSPD1P10809 573 aaKnown RBP14.02□□□□□ -0.17
SEC61A1-201ENST00000243253 APOBRQ0VD83 1088 aa14.02□□□□□ -0.17
SEC61A1-201ENST00000243253 CCAR1Q8IX12 1150 aaKnown RBP14.02□□□□□ -0.17
SEC61A1-201ENST00000243253 ZNF274Q96GC6 653 aaPredicted RBP14.02□□□□□ -0.17
SEC61A1-201ENST00000243253 GPR108Q9NPR9 543 aa14.02□□□□□ -0.17
SEC61A1-201ENST00000243253 NHSL1Q5SYE7 1610 aa14.01□□□□□ -0.17
SEC61A1-201ENST00000243253 TNNT1P13805 278 aa14.01□□□□□ -0.17
SEC61A1-201ENST00000243253 FEZ1Q99689 392 aa14.01□□□□□ -0.17
SEC61A1-201ENST00000243253 BPIFA3Q9BQP9 254 aa14.01□□□□□ -0.17
SEC61A1-201ENST00000243253 OSBPL5Q9H0X9 879 aaPredicted RBP14.01□□□□□ -0.17
SEC61A1-201ENST00000243253 DDX41Q9UJV9 622 aaKnown RBP14.01□□□□□ -0.17
SEC61A1-201ENST00000243253 LRP6O75581 1613 aa14.01□□□□□ -0.17
SEC61A1-201ENST00000243253 CTAGE5O15320 804 aa14.01□□□□□ -0.17
SEC61A1-201ENST00000243253 CYP27B1O15528 508 aa14.01□□□□□ -0.17
SEC61A1-201ENST00000243253 TIMM10P62072 90 aa14.01□□□□□ -0.17
SEC61A1-201ENST00000243253 FAM160A1Q05DH4 1040 aa14.01□□□□□ -0.17
SEC61A1-201ENST00000243253 STX1AQ16623 288 aa14.01□□□□□ -0.17
SEC61A1-201ENST00000243253 BICD2Q8TD16 824 aa14.01□□□□□ -0.17
SEC61A1-201ENST00000243253 MAST3O60307 1309 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms