RNA–Protein interactions for RNA: ENST00000242839.8

ATP7B-201, Transcript of ATPase copper transporting beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATP7B, Length 6,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-201ENST00000242839 ERCC3P19447 782 aa12.8□□□□□ -0.36
ATP7B-201ENST00000242839 RNASE9P60153 205 aaKnown RBP12.8□□□□□ -0.36
ATP7B-201ENST00000242839 NAA16Q6N069 864 aaPredicted RBP12.8□□□□□ -0.36
ATP7B-201ENST00000242839 CYLC1P35663 651 aaPredicted RBP12.8□□□□□ -0.36
ATP7B-201ENST00000242839 HELBQ8NG08 1087 aaPredicted RBP12.8□□□□□ -0.36
ATP7B-201ENST00000242839 UBLCP1Q8WVY7 318 aaPredicted RBP12.8□□□□□ -0.36
ATP7B-201ENST00000242839 LRRC9Q6ZRR7 1453 aa12.8□□□□□ -0.36
ATP7B-201ENST00000242839 RAB3GAP1Q15042 981 aa12.8□□□□□ -0.36
ATP7B-201ENST00000242839 CCDC129Q6ZRS4 1044 aa12.8□□□□□ -0.36
ATP7B-201ENST00000242839 C6orf50Q9HD87 102 aa12.8□□□□□ -0.36
ATP7B-201ENST00000242839 ECHDC1Q9NTX5 307 aa12.8□□□□□ -0.36
ATP7B-201ENST00000242839 GUCA1BQ9UMX6 200 aa12.8□□□□□ -0.36
ATP7B-201ENST00000242839 PHF8Q9UPP1 1060 aa12.8□□□□□ -0.36
ATP7B-201ENST00000242839 PLEKHH1Q9ULM0 1364 aa12.8□□□□□ -0.36
ATP7B-201ENST00000242839 RHOXF2BP0C7M4 288 aa12.79□□□□□ -0.36
ATP7B-201ENST00000242839 EIF6P56537 245 aaKnown RBP12.79□□□□□ -0.36
ATP7B-201ENST00000242839 ZYXQ15942 572 aaKnown RBP12.79□□□□□ -0.36
ATP7B-201ENST00000242839 ZSCAN23Q3MJ62 389 aa12.79□□□□□ -0.36
ATP7B-201ENST00000242839 MICALL1Q8N3F8 863 aa12.79□□□□□ -0.36
ATP7B-201ENST00000242839 ANKRD24Q8TF21 1146 aa12.79□□□□□ -0.36
ATP7B-201ENST00000242839 RHOXF2Q9BQY4 288 aa12.79□□□□□ -0.36
ATP7B-201ENST00000242839 USP37Q86T82 979 aa12.79□□□□□ -0.36
ATP7B-201ENST00000242839 FNBP4Q8N3X1 1017 aaPredicted RBP12.79□□□□□ -0.36
ATP7B-201ENST00000242839 KIFC2Q96AC6 838 aa12.79□□□□□ -0.36
ATP7B-201ENST00000242839 CCDC61Q9Y6R9 512 aa12.79□□□□□ -0.36
ATP7B-201ENST00000242839 CTAGE15A4D2H0 777 aa12.79□□□□□ -0.36
ATP7B-201ENST00000242839 CTAGE8P0CG41 777 aa12.79□□□□□ -0.36
ATP7B-201ENST00000242839 PSMD6Q15008 389 aa12.79□□□□□ -0.36
ATP7B-201ENST00000242839 CTAGE6Q86UF2 777 aa12.79□□□□□ -0.36
ATP7B-201ENST00000242839 CTAGE4Q8IX94 777 aa12.79□□□□□ -0.36
ATP7B-201ENST00000242839 NIP7Q9Y221 180 aaKnown RBP eCLIP12.79□□□□□ -0.36
ATP7B-201ENST00000242839 ATP6V0A2Q9Y487 856 aa12.79□□□□□ -0.36
ATP7B-201ENST00000242839 DDX39AO00148 427 aaKnown RBP12.79□□□□□ -0.36
ATP7B-201ENST00000242839 RARSP54136 660 aaKnown RBP12.79□□□□□ -0.36
ATP7B-201ENST00000242839 MAGEB6Q8N7X4 407 aa12.79□□□□□ -0.36
ATP7B-201ENST00000242839 LZTFL1Q9NQ48 299 aa12.79□□□□□ -0.36
ATP7B-201ENST00000242839 CHPF2Q9P2E5 772 aa12.79□□□□□ -0.36
ATP7B-201ENST00000242839 E7EVH7 732 aa12.78□□□□□ -0.36
ATP7B-201ENST00000242839 RRP36Q96EU6 259 aaKnown RBP12.78□□□□□ -0.36
ATP7B-201ENST00000242839 TBC1D2Q9BYX2 928 aa12.78□□□□□ -0.36
ATP7B-201ENST00000242839 KRT23Q9C075 422 aa12.78□□□□□ -0.36
ATP7B-201ENST00000242839 NOD1Q9Y239 953 aa12.78□□□□□ -0.36
ATP7B-201ENST00000242839 AMOTL2Q9Y2J4 779 aa12.78□□□□□ -0.36
ATP7B-201ENST00000242839 SYNJ2O15056 1496 aa12.78□□□□□ -0.36
ATP7B-201ENST00000242839 SPOUT1Q5T280 376 aaKnown RBP12.78□□□□□ -0.36
ATP7B-201ENST00000242839 ZNF804AQ7Z570 1209 aa12.78□□□□□ -0.36
ATP7B-201ENST00000242839 SORBS3O60504 671 aa12.78□□□□□ -0.36
ATP7B-201ENST00000242839 NBPF7P0C2Y1 421 aaPredicted RBP12.78□□□□□ -0.36
ATP7B-201ENST00000242839 EHBP1Q8NDI1 1231 aa12.78□□□□□ -0.36
ATP7B-201ENST00000242839 TRIM7Q9C029 511 aa12.78□□□□□ -0.36
ATP7B-201ENST00000242839 DNAJC25Q9H1X3 360 aa12.78□□□□□ -0.36
ATP7B-201ENST00000242839 GMNNO75496 209 aa12.78□□□□□ -0.36
ATP7B-201ENST00000242839 CSPG5O95196 566 aa12.78□□□□□ -0.36
ATP7B-201ENST00000242839 GAS8O95995 478 aa12.78□□□□□ -0.36
ATP7B-201ENST00000242839 NOP9Q86U38 636 aaKnown RBP12.78□□□□□ -0.36
ATP7B-201ENST00000242839 VPS18Q9P253 973 aa12.78□□□□□ -0.36
ATP7B-201ENST00000242839 CCDC77Q9BR77 488 aa12.77□□□□□ -0.36
ATP7B-201ENST00000242839 TFCP2L1Q9NZI6 479 aa12.77□□□□□ -0.36
ATP7B-201ENST00000242839 ATP2A1O14983 1001 aa12.77□□□□□ -0.36
ATP7B-201ENST00000242839 DAPK3O43293 454 aa12.77□□□□□ -0.36
ATP7B-201ENST00000242839 IFNL2Q8IZJ0 200 aa12.77□□□□□ -0.36
ATP7B-201ENST00000242839 DDX12PQ92771 950 aa12.77□□□□□ -0.36
ATP7B-201ENST00000242839 TTLL3Q9Y4R7 772 aa12.77□□□□□ -0.36
ATP7B-201ENST00000242839 ANKS4BQ8N8V4 417 aa12.77□□□□□ -0.37
ATP7B-201ENST00000242839 POGZQ7Z3K3 1410 aa12.77□□□□□ -0.37
ATP7B-201ENST00000242839 SYT1P21579 422 aa12.77□□□□□ -0.37
ATP7B-201ENST00000242839 GTF2A1P52655 376 aaPredicted RBP12.77□□□□□ -0.37
ATP7B-201ENST00000242839 NEK11Q8NG66 645 aa12.77□□□□□ -0.37
ATP7B-201ENST00000242839 PYM1Q9BRP8 204 aaKnown RBP12.77□□□□□ -0.37
ATP7B-201ENST00000242839 GPCPD1Q9NPB8 672 aa12.77□□□□□ -0.37
ATP7B-201ENST00000242839 MCM9Q9NXL9 1143 aa12.77□□□□□ -0.37
ATP7B-201ENST00000242839 CEP83Q9Y592 693 aa12.77□□□□□ -0.37
ATP7B-201ENST00000242839 HSPA1LP34931 641 aa12.77□□□□□ -0.37
ATP7B-201ENST00000242839 KRT2P35908 639 aa12.77□□□□□ -0.37
ATP7B-201ENST00000242839 BIRC3Q13489 604 aa12.77□□□□□ -0.37
ATP7B-201ENST00000242839 ESR2Q92731 530 aa12.77□□□□□ -0.37
ATP7B-201ENST00000242839 PARP3Q9Y6F1 533 aa12.77□□□□□ -0.37
ATP7B-201ENST00000242839 CTAGE9A4FU28 777 aa12.76□□□□□ -0.37
ATP7B-201ENST00000242839 PDIA4P13667 645 aaKnown RBP12.76□□□□□ -0.37
ATP7B-201ENST00000242839 SLC9C2Q5TAH2 1124 aa12.76□□□□□ -0.37
ATP7B-201ENST00000242839 TACC1O75410 805 aa12.76□□□□□ -0.37
ATP7B-201ENST00000242839 CCDC121Q6ZUS5 278 aa12.76□□□□□ -0.37
ATP7B-201ENST00000242839 CCDC169A6NNP5 214 aa12.76□□□□□ -0.37
ATP7B-201ENST00000242839 ANO3Q9BYT9 981 aa12.76□□□□□ -0.37
ATP7B-201ENST00000242839 TRIM6Q9C030 488 aaPredicted RBP12.76□□□□□ -0.37
ATP7B-201ENST00000242839 NEMFO60524 1076 aa12.76□□□□□ -0.37
ATP7B-201ENST00000242839 LMOD1P29536 600 aaPredicted RBP12.76□□□□□ -0.37
ATP7B-201ENST00000242839 USP48Q86UV5 1035 aa12.76□□□□□ -0.37
ATP7B-201ENST00000242839 NACA2Q9H009 215 aa12.76□□□□□ -0.37
ATP7B-201ENST00000242839 GOLGA6L9A6NEM1 432 aa12.75□□□□□ -0.37
ATP7B-201ENST00000242839 UQCRFS1P1P0C7P4 283 aa12.75□□□□□ -0.37
ATP7B-201ENST00000242839 CUL4BQ13620 913 aa12.75□□□□□ -0.37
ATP7B-201ENST00000242839 ZNF569Q5MCW4 686 aa12.75□□□□□ -0.37
ATP7B-201ENST00000242839 RABEP2Q9H5N1 569 aa12.75□□□□□ -0.37
ATP7B-201ENST00000242839 SLC52A1Q9NWF4 448 aa12.75□□□□□ -0.37
ATP7B-201ENST00000242839 PA2G4Q9UQ80 394 aaKnown RBP12.75□□□□□ -0.37
ATP7B-201ENST00000242839 CTNND2Q9UQB3 1225 aa12.75□□□□□ -0.37
ATP7B-201ENST00000242839 SKILP12757 684 aa12.75□□□□□ -0.37
ATP7B-201ENST00000242839 TRIM27P14373 513 aa12.75□□□□□ -0.37
ATP7B-201ENST00000242839 UBE2HP62256 183 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms