RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 JDP2Q8WYK2 163 aa16.1■□□□□ 0.17
SLIRP-201ENST00000238688 REC8O95072 547 aa16.09■□□□□ 0.17
SLIRP-201ENST00000238688 IFIT2P09913 472 aaKnown RBP16.09■□□□□ 0.17
SLIRP-201ENST00000238688 IL15P40933 162 aaPredicted RBP16.09■□□□□ 0.17
SLIRP-201ENST00000238688 PTPN12Q05209 780 aaKnown RBP16.09■□□□□ 0.17
SLIRP-201ENST00000238688 AOC3Q16853 763 aa16.09■□□□□ 0.17
SLIRP-201ENST00000238688 RTL5Q5HYW3 569 aaPredicted RBP16.09■□□□□ 0.17
SLIRP-201ENST00000238688 DDX46Q7L014 1031 aaKnown RBP16.09■□□□□ 0.17
SLIRP-201ENST00000238688 CELF1Q92879 486 aaKnown RBP16.09■□□□□ 0.17
SLIRP-201ENST00000238688 HACL1Q9UJ83 578 aa16.09■□□□□ 0.17
SLIRP-201ENST00000238688 SPEF2Q9C093 1822 aa16.09■□□□□ 0.17
SLIRP-201ENST00000238688 PASKQ96RG2 1323 aa16.09■□□□□ 0.17
SLIRP-201ENST00000238688 APBB1O00213 710 aa16.08■□□□□ 0.16
SLIRP-201ENST00000238688 IRS4O14654 1257 aaPredicted RBP16.08■□□□□ 0.16
SLIRP-201ENST00000238688 ITGBL1O95965 494 aaPredicted RBP16.08■□□□□ 0.16
SLIRP-201ENST00000238688 CSF1RP07333 972 aa16.08■□□□□ 0.16
SLIRP-201ENST00000238688 SDSP20132 328 aa16.08■□□□□ 0.16
SLIRP-201ENST00000238688 EPHX2P34913 555 aa16.08■□□□□ 0.16
SLIRP-201ENST00000238688 RBM25P49756 843 aaKnown RBP16.08■□□□□ 0.16
SLIRP-201ENST00000238688 SCNN1DP51172 638 aa16.08■□□□□ 0.16
SLIRP-201ENST00000238688 LMBR1LQ6UX01 489 aa16.08■□□□□ 0.16
SLIRP-201ENST00000238688 TBC1D9Q6ZT07 1266 aa16.08■□□□□ 0.16
SLIRP-201ENST00000238688 LDHDQ86WU2 507 aa16.08■□□□□ 0.16
SLIRP-201ENST00000238688 ECHDC1Q9NTX5 307 aa16.08■□□□□ 0.16
SLIRP-201ENST00000238688 RTL9Q8NET4 1388 aa16.08■□□□□ 0.16
SLIRP-201ENST00000238688 PCNTO95613 3336 aa16.07■□□□□ 0.16
SLIRP-201ENST00000238688 PPIP5K2O43314 1243 aa16.07■□□□□ 0.16
SLIRP-201ENST00000238688 EPHA10Q5JZY3 1008 aa16.07■□□□□ 0.16
SLIRP-201ENST00000238688 MPNDQ8N594 471 aa16.07■□□□□ 0.16
SLIRP-201ENST00000238688 VPS33BQ9H267 617 aa16.07■□□□□ 0.16
SLIRP-201ENST00000238688 RFX7Q2KHR2 1363 aa16.06■□□□□ 0.16
SLIRP-201ENST00000238688 PDE8AO60658 829 aa16.06■□□□□ 0.16
SLIRP-201ENST00000238688 EIF6P56537 245 aaKnown RBP16.06■□□□□ 0.16
SLIRP-201ENST00000238688 KIAA2012Q0VF49 1180 aa16.06■□□□□ 0.16
SLIRP-201ENST00000238688 CCDC57Q2TAC2 916 aa16.06■□□□□ 0.16
SLIRP-201ENST00000238688 DPP8Q6V1X1 898 aaPredicted RBP16.06■□□□□ 0.16
SLIRP-201ENST00000238688 CNTROBQ8N137 903 aa16.06■□□□□ 0.16
SLIRP-201ENST00000238688 JARID2Q92833 1246 aaPredicted RBP16.06■□□□□ 0.16
SLIRP-201ENST00000238688 C22orf23Q9BZE7 217 aa16.06■□□□□ 0.16
SLIRP-201ENST00000238688 GJA3Q9Y6H8 435 aa16.06■□□□□ 0.16
SLIRP-201ENST00000238688 SCN9AQ15858 1988 aa16.06■□□□□ 0.16
SLIRP-201ENST00000238688 HIP1O00291 1037 aa16.05■□□□□ 0.16
SLIRP-201ENST00000238688 SASH1O94885 1247 aa16.05■□□□□ 0.16
SLIRP-201ENST00000238688 EPS15P42566 896 aa16.05■□□□□ 0.16
SLIRP-201ENST00000238688 CXCL9Q07325 125 aa16.05■□□□□ 0.16
SLIRP-201ENST00000238688 BECN1Q14457 450 aa16.05■□□□□ 0.16
SLIRP-201ENST00000238688 EAPPQ56P03 285 aaPredicted RBP16.05■□□□□ 0.16
SLIRP-201ENST00000238688 NIM1KQ8IY84 436 aa16.05■□□□□ 0.16
SLIRP-201ENST00000238688 OTUD7AQ8TE49 926 aaPredicted RBP16.05■□□□□ 0.16
SLIRP-201ENST00000238688 IL1RAPL2Q9NP60 686 aa16.05■□□□□ 0.16
SLIRP-201ENST00000238688 YDJCA8MPS7 323 aa16.04■□□□□ 0.16
SLIRP-201ENST00000238688 EYA2O00167 538 aa16.04■□□□□ 0.16
SLIRP-201ENST00000238688 IFIT5Q13325 482 aaKnown RBP16.04■□□□□ 0.16
SLIRP-201ENST00000238688 TMC4Q7Z404 712 aa16.04■□□□□ 0.16
SLIRP-201ENST00000238688 SUPT20HQ8NEM7 779 aa16.04■□□□□ 0.16
SLIRP-201ENST00000238688 PI4K2BQ8TCG2 481 aa16.04■□□□□ 0.16
SLIRP-201ENST00000238688 SEC31BQ9NQW1 1179 aa16.04■□□□□ 0.16
SLIRP-201ENST00000238688 ZNRF3Q9ULT6 936 aa16.04■□□□□ 0.16
SLIRP-201ENST00000238688 AKAP2Q9Y2D5 859 aa16.04■□□□□ 0.16
SLIRP-201ENST00000238688 POLR2AP24928 1970 aaKnown RBP16.04■□□□□ 0.16
SLIRP-201ENST00000238688 CTSWP56202 376 aa16.03■□□□□ 0.16
SLIRP-201ENST00000238688 AACSQ86V21 672 aa16.03■□□□□ 0.16
SLIRP-201ENST00000238688 PNMA8AQ86V59 439 aaPredicted RBP16.03■□□□□ 0.16
SLIRP-201ENST00000238688 TMX4Q9H1E5 349 aaPredicted RBP16.03■□□□□ 0.16
SLIRP-201ENST00000238688 CREBZFQ9NS37 354 aa16.03■□□□□ 0.16
SLIRP-201ENST00000238688 DAXXQ9UER7 740 aaPredicted RBP16.03■□□□□ 0.16
SLIRP-201ENST00000238688 PA2G4Q9UQ80 394 aaKnown RBP16.03■□□□□ 0.16
SLIRP-201ENST00000238688 TRPM7Q96QT4 1865 aa16.03■□□□□ 0.16
SLIRP-201ENST00000238688 SEC24BO95487 1268 aa16.02■□□□□ 0.16
SLIRP-201ENST00000238688 RPS8P62241 208 aaKnown RBP16.02■□□□□ 0.16
SLIRP-201ENST00000238688 GPSM2P81274 684 aa16.02■□□□□ 0.16
SLIRP-201ENST00000238688 MAP1SQ66K74 1059 aaPredicted RBP16.02■□□□□ 0.16
SLIRP-201ENST00000238688 RUFY2Q8WXA3 655 aa16.02■□□□□ 0.16
SLIRP-201ENST00000238688 EVI5LQ96CN4 794 aa16.02■□□□□ 0.16
SLIRP-201ENST00000238688 POLLQ9UGP5 575 aa16.02■□□□□ 0.16
SLIRP-201ENST00000238688 ANKRD18BA2A2Z9 1011 aa16.01■□□□□ 0.15
SLIRP-201ENST00000238688 MFAP1P55081 439 aaKnown RBP16.01■□□□□ 0.15
SLIRP-201ENST00000238688 TNNI3KQ59H18 835 aa16.01■□□□□ 0.15
SLIRP-201ENST00000238688 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.01■□□□□ 0.15
SLIRP-201ENST00000238688 GPRC5DQ9NZD1 345 aa16.01■□□□□ 0.15
SLIRP-201ENST00000238688 CLEC11AQ9Y240 323 aa16.01■□□□□ 0.15
SLIRP-201ENST00000238688 FPGT-TNNI3KV9GXZ4 949 aa16.01■□□□□ 0.15
SLIRP-201ENST00000238688 PSME4Q14997 1843 aa16.01■□□□□ 0.15
SLIRP-201ENST00000238688 ARAP2Q8WZ64 1704 aa16■□□□□ 0.15
SLIRP-201ENST00000238688 ATP5JP18859 108 aa16■□□□□ 0.15
SLIRP-201ENST00000238688 TTLL11Q8NHH1 800 aa16■□□□□ 0.15
SLIRP-201ENST00000238688 EAF2Q96CJ1 260 aaPredicted RBP16■□□□□ 0.15
SLIRP-201ENST00000238688 NSFL1CQ9UNZ2 370 aaKnown RBP16■□□□□ 0.15
SLIRP-201ENST00000238688 CHMP3Q9Y3E7 222 aa16■□□□□ 0.15
SLIRP-201ENST00000238688 ZNF609O15014 1411 aa16■□□□□ 0.15
SLIRP-201ENST00000238688 RAD50Q92878 1312 aa15.99■□□□□ 0.15
SLIRP-201ENST00000238688 TRIM6-TRIM34B2RNG4 842 aa15.99■□□□□ 0.15
SLIRP-201ENST00000238688 RAD17O75943 681 aa15.99■□□□□ 0.15
SLIRP-201ENST00000238688 GMPSP49915 693 aaPredicted RBP15.99■□□□□ 0.15
SLIRP-201ENST00000238688 FMR1Q06787 632 aaKnown RBP eCLIP15.99■□□□□ 0.15
SLIRP-201ENST00000238688 CCDC152Q4G0S7 254 aa15.99■□□□□ 0.15
SLIRP-201ENST00000238688 TAF7LQ5H9L4 462 aa15.99■□□□□ 0.15
SLIRP-201ENST00000238688 CIAPIN1Q6FI81 312 aa15.99■□□□□ 0.15
SLIRP-201ENST00000238688 ATG9AQ7Z3C6 839 aa15.99■□□□□ 0.15
SLIRP-201ENST00000238688 TBC1D16Q8TBP0 767 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms