RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 ANKIB1Q9P2G1 1089 aa11.83□□□□□ -0.51
VCL-201ENST00000211998 FRMD3A2A2Y4 597 aa11.83□□□□□ -0.52
VCL-201ENST00000211998 STMN2Q93045 179 aa11.83□□□□□ -0.52
VCL-201ENST00000211998 EHMT1Q9H9B1 1298 aa11.83□□□□□ -0.52
VCL-201ENST00000211998 ZNF215Q9UL58 517 aaPredicted RBP11.83□□□□□ -0.52
VCL-201ENST00000211998 JRKLQ9Y4A0 524 aa11.83□□□□□ -0.52
VCL-201ENST00000211998 PLB1Q6P1J6 1458 aa11.83□□□□□ -0.52
VCL-201ENST00000211998 MINDY4BA8MYZ0 360 aa11.83□□□□□ -0.52
VCL-201ENST00000211998 F6X3S4 739 aa11.83□□□□□ -0.52
VCL-201ENST00000211998 TTF1Q15361 905 aaPredicted RBP11.83□□□□□ -0.52
VCL-201ENST00000211998 CCDC8Q9H0W5 538 aaPredicted RBP11.83□□□□□ -0.52
VCL-201ENST00000211998 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.83□□□□□ -0.52
VCL-201ENST00000211998 CCDC40Q4G0X9 1142 aa11.83□□□□□ -0.52
VCL-201ENST00000211998 GAS2L3Q86XJ1 694 aa11.83□□□□□ -0.52
VCL-201ENST00000211998 GOLGA6BA6NDN3 693 aa11.83□□□□□ -0.52
VCL-201ENST00000211998 SPAG1Q07617 926 aa11.83□□□□□ -0.52
VCL-201ENST00000211998 PPP4R3AQ6IN85 833 aa11.83□□□□□ -0.52
VCL-201ENST00000211998 ZNF444Q8N0Y2 327 aaPredicted RBP11.83□□□□□ -0.52
VCL-201ENST00000211998 VEZTQ9HBM0 779 aa11.83□□□□□ -0.52
VCL-201ENST00000211998 CBX8Q9HC52 389 aa11.83□□□□□ -0.52
VCL-201ENST00000211998 ZNF213O14771 459 aa11.82□□□□□ -0.52
VCL-201ENST00000211998 TMEM266Q2M3C6 531 aa11.82□□□□□ -0.52
VCL-201ENST00000211998 NAPGQ99747 312 aaPredicted RBP11.82□□□□□ -0.52
VCL-201ENST00000211998 RASAL2Q9UJF2 1139 aa11.82□□□□□ -0.52
VCL-201ENST00000211998 EMILIN1Q9Y6C2 1016 aa11.82□□□□□ -0.52
VCL-201ENST00000211998 AFMP43652 599 aa11.82□□□□□ -0.52
VCL-201ENST00000211998 TUBB2AQ13885 445 aa11.82□□□□□ -0.52
VCL-201ENST00000211998 CCDC38Q502W7 563 aa11.82□□□□□ -0.52
VCL-201ENST00000211998 INTS8Q75QN2 995 aaKnown RBP11.82□□□□□ -0.52
VCL-201ENST00000211998 PPP1R14CQ8TAE6 165 aa11.82□□□□□ -0.52
VCL-201ENST00000211998 TUBB2BQ9BVA1 445 aa11.82□□□□□ -0.52
VCL-201ENST00000211998 ANKRD36BQ8N2N9 1353 aa11.82□□□□□ -0.52
VCL-201ENST00000211998 GOLGA8AA7E2F4 631 aa11.82□□□□□ -0.52
VCL-201ENST00000211998 UBLCP1Q8WVY7 318 aaPredicted RBP11.82□□□□□ -0.52
VCL-201ENST00000211998 RPGRQ92834 1020 aaKnown RBP11.82□□□□□ -0.52
VCL-201ENST00000211998 CUL5Q93034 780 aa11.82□□□□□ -0.52
VCL-201ENST00000211998 TCEANC2Q96MN5 208 aa11.82□□□□□ -0.52
VCL-201ENST00000211998 TMEM63CQ9P1W3 806 aa11.82□□□□□ -0.52
VCL-201ENST00000211998 SLC12A7Q9Y666 1083 aa11.82□□□□□ -0.52
VCL-201ENST00000211998 IL16Q14005 1332 aa11.82□□□□□ -0.52
VCL-201ENST00000211998 RLBP1P12271 317 aa11.82□□□□□ -0.52
VCL-201ENST00000211998 E2F4Q16254 413 aa11.82□□□□□ -0.52
VCL-201ENST00000211998 SUDS3Q9H7L9 328 aaPredicted RBP11.82□□□□□ -0.52
VCL-201ENST00000211998 KCNK9Q9NPC2 374 aa11.82□□□□□ -0.52
VCL-201ENST00000211998 EXOC5O00471 708 aa11.81□□□□□ -0.52
VCL-201ENST00000211998 IFNL2Q8IZJ0 200 aa11.81□□□□□ -0.52
VCL-201ENST00000211998 GPR161Q8N6U8 529 aaKnown RBP11.81□□□□□ -0.52
VCL-201ENST00000211998 SEC62Q99442 399 aaKnown RBP11.81□□□□□ -0.52
VCL-201ENST00000211998 CCDC77Q9BR77 488 aa11.81□□□□□ -0.52
VCL-201ENST00000211998 PIK3R4Q99570 1358 aa11.81□□□□□ -0.52
VCL-201ENST00000211998 ADGRF5Q8IZF2 1346 aa11.81□□□□□ -0.52
VCL-201ENST00000211998 NOL3O60936 208 aaKnown RBP11.81□□□□□ -0.52
VCL-201ENST00000211998 BRF1Q92994 677 aa11.81□□□□□ -0.52
VCL-201ENST00000211998 MARCKSP29966 332 aaPredicted RBP11.81□□□□□ -0.52
VCL-201ENST00000211998 FLIIQ13045 1269 aa11.81□□□□□ -0.52
VCL-201ENST00000211998 MPRIPQ6WCQ1 1025 aa11.81□□□□□ -0.52
VCL-201ENST00000211998 SEPT14Q6ZU15 432 aa11.81□□□□□ -0.52
VCL-201ENST00000211998 USHBP1Q8N6Y0 703 aa11.81□□□□□ -0.52
VCL-201ENST00000211998 HMG20BQ9P0W2 317 aa11.81□□□□□ -0.52
VCL-201ENST00000211998 LDHCP07864 332 aa11.81□□□□□ -0.52
VCL-201ENST00000211998 TACO1Q9BSH4 297 aaKnown RBP11.81□□□□□ -0.52
VCL-201ENST00000211998 A0A087WZG4 1122 aa11.8□□□□□ -0.52
VCL-201ENST00000211998 AKR1B15C9JRZ8 316 aaPredicted RBP11.8□□□□□ -0.52
VCL-201ENST00000211998 RAB11FIP4Q86YS3 637 aa11.8□□□□□ -0.52
VCL-201ENST00000211998 CDC5LQ99459 802 aaKnown RBP11.8□□□□□ -0.52
VCL-201ENST00000211998 UBA5Q9GZZ9 404 aa11.8□□□□□ -0.52
VCL-201ENST00000211998 FAM184BQ9ULE4 1060 aa11.8□□□□□ -0.52
VCL-201ENST00000211998 RIPOR2Q9Y4F9 1068 aa11.8□□□□□ -0.52
VCL-201ENST00000211998 IKBKGQ9Y6K9 419 aa11.8□□□□□ -0.52
VCL-201ENST00000211998 NOS1P29475 1434 aa11.8□□□□□ -0.52
VCL-201ENST00000211998 IARSP41252 1262 aaKnown RBP11.8□□□□□ -0.52
VCL-201ENST00000211998 AK2P54819 239 aa11.8□□□□□ -0.52
VCL-201ENST00000211998 CCDC42Q96M95 316 aa11.8□□□□□ -0.52
VCL-201ENST00000211998 ECHDC1Q9NTX5 307 aa11.8□□□□□ -0.52
VCL-201ENST00000211998 ZBTB12Q9Y330 459 aaPredicted RBP11.8□□□□□ -0.52
VCL-201ENST00000211998 DMRT2Q9Y5R5 561 aa11.8□□□□□ -0.52
VCL-201ENST00000211998 GADD45BO75293 160 aaPredicted RBP11.8□□□□□ -0.52
VCL-201ENST00000211998 C16orf71Q8IYS4 520 aaPredicted RBP11.8□□□□□ -0.52
VCL-201ENST00000211998 USP26Q9BXU7 913 aa11.8□□□□□ -0.52
VCL-201ENST00000211998 PDE1AP54750 535 aa11.8□□□□□ -0.52
VCL-201ENST00000211998 CCDC122Q5T0U0 273 aa11.8□□□□□ -0.52
VCL-201ENST00000211998 C14orf93Q9H972 538 aaKnown RBP11.8□□□□□ -0.52
VCL-201ENST00000211998 PPFIA1Q13136 1202 aa11.8□□□□□ -0.52
VCL-201ENST00000211998 IDI1Q13907 227 aa11.8□□□□□ -0.52
VCL-201ENST00000211998 BRD3Q15059 726 aa11.8□□□□□ -0.52
VCL-201ENST00000211998 CEP128Q6ZU80 1094 aa11.8□□□□□ -0.52
VCL-201ENST00000211998 CATIPQ7Z7H3 387 aa11.8□□□□□ -0.52
VCL-201ENST00000211998 RMND1Q9NWS8 449 aa11.8□□□□□ -0.52
VCL-201ENST00000211998 E7EVH7 732 aa11.79□□□□□ -0.52
VCL-201ENST00000211998 RANBP6O60518 1105 aaKnown RBP11.79□□□□□ -0.52
VCL-201ENST00000211998 ZNF853P0CG23 659 aa11.79□□□□□ -0.52
VCL-201ENST00000211998 KRT13P13646 458 aa11.79□□□□□ -0.52
VCL-201ENST00000211998 CTNNA2P26232 953 aa11.79□□□□□ -0.52
VCL-201ENST00000211998 DDX12PQ92771 950 aa11.79□□□□□ -0.52
VCL-201ENST00000211998 FANCAO15360 1455 aa11.79□□□□□ -0.52
VCL-201ENST00000211998 CCDC194A0A1B0GVG4 234 aa11.79□□□□□ -0.52
VCL-201ENST00000211998 FOXO3O43524 673 aa11.79□□□□□ -0.52
VCL-201ENST00000211998 PPARDQ03181 441 aa11.79□□□□□ -0.52
VCL-201ENST00000211998 CCDC144CPQ8IYA2 1237 aa11.79□□□□□ -0.52
VCL-201ENST00000211998 CEP120Q8N960 986 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms