RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 TAS2R1Q9NYW7 299 aa11.22□□□□□ -0.61
SNX1-214ENST00000625244 OR6C6A6NF89 314 aa11.21□□□□□ -0.61
SNX1-214ENST00000625244 EBAG9O00559 213 aa11.21□□□□□ -0.61
SNX1-214ENST00000625244 NR2C1P13056 603 aa11.21□□□□□ -0.61
SNX1-214ENST00000625244 NCK1P16333 377 aa11.21□□□□□ -0.61
SNX1-214ENST00000625244 FUT1P19526 365 aa11.21□□□□□ -0.61
SNX1-214ENST00000625244 BNIP1Q12981 228 aa11.21□□□□□ -0.61
SNX1-214ENST00000625244 TOP3AQ13472 1001 aaPredicted RBP11.21□□□□□ -0.61
SNX1-214ENST00000625244 LAPTM4AQ15012 233 aa11.21□□□□□ -0.61
SNX1-214ENST00000625244 IFI44LQ53G44 452 aa11.21□□□□□ -0.61
SNX1-214ENST00000625244 OTPQ5XKR4 325 aa11.21□□□□□ -0.61
SNX1-214ENST00000625244 FAM156AQ8NDB6 213 aa11.21□□□□□ -0.61
SNX1-214ENST00000625244 GPR32P1Q8NGA4 272 aa11.21□□□□□ -0.61
SNX1-214ENST00000625244 LRGUKQ96M69 825 aa11.21□□□□□ -0.61
SNX1-214ENST00000625244 DMRTB1Q96MA1 342 aa11.21□□□□□ -0.61
SNX1-214ENST00000625244 CCL13Q99616 98 aa11.21□□□□□ -0.61
SNX1-214ENST00000625244 BTBD10Q9BSF8 475 aa11.21□□□□□ -0.61
SNX1-214ENST00000625244 TXNIPQ9H3M7 391 aa11.21□□□□□ -0.61
SNX1-214ENST00000625244 CD300AQ9UGN4 299 aa11.21□□□□□ -0.61
SNX1-214ENST00000625244 SLC7A7Q9UM01 511 aa11.21□□□□□ -0.61
SNX1-214ENST00000625244 HECTD4Q9Y4D8 3996 aa11.21□□□□□ -0.62
SNX1-214ENST00000625244 TRBV23-1A0A0A0MS06 115 aa11.2□□□□□ -0.62
SNX1-214ENST00000625244 TCRBV4S1A1TA0A5B7 111 aa11.2□□□□□ -0.62
SNX1-214ENST00000625244 H0YHG0 523 aa11.2□□□□□ -0.62
SNX1-214ENST00000625244 IFNW1P05000 195 aa11.2□□□□□ -0.62
SNX1-214ENST00000625244 NCR3LG1Q68D85 454 aa11.2□□□□□ -0.62
SNX1-214ENST00000625244 ZNF826PQ6ZT77 177 aa11.2□□□□□ -0.62
SNX1-214ENST00000625244 CBLL1Q75N03 491 aa11.2□□□□□ -0.62
SNX1-214ENST00000625244 CYP4Z1Q86W10 505 aa11.2□□□□□ -0.62
SNX1-214ENST00000625244 RBM45Q8IUH3 476 aaKnown RBP11.2□□□□□ -0.62
SNX1-214ENST00000625244 GCSAMQ8N6F7 178 aa11.2□□□□□ -0.62
SNX1-214ENST00000625244 FAM216BQ8N7L0 139 aa11.2□□□□□ -0.62
SNX1-214ENST00000625244 OR6T1Q8NGN1 323 aa11.2□□□□□ -0.62
SNX1-214ENST00000625244 OR1F12Q8NHA8 337 aa11.2□□□□□ -0.62
SNX1-214ENST00000625244 ADAMTS16Q8TE57 1224 aa11.2□□□□□ -0.62
SNX1-214ENST00000625244 TFAP2CQ92754 450 aa11.2□□□□□ -0.62
SNX1-214ENST00000625244 APOBEC3DQ96AK3 386 aaPredicted RBP11.2□□□□□ -0.62
SNX1-214ENST00000625244 WACQ9BTA9 647 aa11.2□□□□□ -0.62
SNX1-214ENST00000625244 POLR2J2Q9GZM3 115 aaKnown RBP11.2□□□□□ -0.62
SNX1-214ENST00000625244 POLR2J3Q9H1A7 115 aaKnown RBP11.2□□□□□ -0.62
SNX1-214ENST00000625244 GORASP2Q9H8Y8 452 aa11.2□□□□□ -0.62
SNX1-214ENST00000625244 C1orf123Q9NWV4 160 aa11.2□□□□□ -0.62
SNX1-214ENST00000625244 GMPR2Q9P2T1 348 aaKnown RBP11.2□□□□□ -0.62
SNX1-214ENST00000625244 KIAA1109Q2LD37 5005 aa11.19□□□□□ -0.62
SNX1-214ENST00000625244 NPIPB13A6NJU9 1138 aa11.19□□□□□ -0.62
SNX1-214ENST00000625244 NPIPB4C9JG80 1138 aa11.19□□□□□ -0.62
SNX1-214ENST00000625244 ARPC2O15144 300 aa11.19□□□□□ -0.62
SNX1-214ENST00000625244 SYNGR1O43759 233 aa11.19□□□□□ -0.62
SNX1-214ENST00000625244 DNAJC8O75937 253 aaPredicted RBP11.19□□□□□ -0.62
SNX1-214ENST00000625244 OR7A10O76100 309 aa11.19□□□□□ -0.62
SNX1-214ENST00000625244 PTBP3O95758 552 aaKnown RBP11.19□□□□□ -0.62
SNX1-214ENST00000625244 TSPAN19P0C672 248 aa11.19□□□□□ -0.62
SNX1-214ENST00000625244 CRYBA2P53672 197 aa11.19□□□□□ -0.62
SNX1-214ENST00000625244 TAS2R41P59536 307 aa11.19□□□□□ -0.62
SNX1-214ENST00000625244 DGCR2P98153 550 aa11.19□□□□□ -0.62
SNX1-214ENST00000625244 CNN3Q15417 329 aaKnown RBP11.19□□□□□ -0.62
SNX1-214ENST00000625244 CCDC92Q53HC0 331 aaPredicted RBP11.19□□□□□ -0.62
SNX1-214ENST00000625244 TEX36Q5VZQ5 186 aa11.19□□□□□ -0.62
SNX1-214ENST00000625244 DHFR2Q86XF0 187 aa11.19□□□□□ -0.62
SNX1-214ENST00000625244 MRPL41Q8IXM3 137 aaKnown RBP11.19□□□□□ -0.62
SNX1-214ENST00000625244 OR4D11Q8NGI4 311 aa11.19□□□□□ -0.62
SNX1-214ENST00000625244 PFN4Q8NHR9 129 aa11.19□□□□□ -0.62
SNX1-214ENST00000625244 CCDC124Q96CT7 223 aaKnown RBP11.19□□□□□ -0.62
SNX1-214ENST00000625244 HSH2DQ96JZ2 352 aa11.19□□□□□ -0.62
SNX1-214ENST00000625244 RCHY1Q96PM5 261 aa11.19□□□□□ -0.62
SNX1-214ENST00000625244 PRSS27Q9BQR3 290 aa11.19□□□□□ -0.62
SNX1-214ENST00000625244 PRSS22Q9GZN4 317 aa11.19□□□□□ -0.62
SNX1-214ENST00000625244 DCAF13Q9NV06 445 aaKnown RBP11.19□□□□□ -0.62
SNX1-214ENST00000625244 ACTR3BQ9P1U1 418 aa11.19□□□□□ -0.62
SNX1-214ENST00000625244 SF3B6Q9Y3B4 125 aaKnown RBP11.19□□□□□ -0.62
SNX1-214ENST00000625244 FAM32AQ9Y421 112 aaKnown RBP11.19□□□□□ -0.62
SNX1-214ENST00000625244 TSSC4Q9Y5U2 329 aaPredicted RBP11.19□□□□□ -0.62
SNX1-214ENST00000625244 TRAPPC13A5PLN9 417 aa11.18□□□□□ -0.62
SNX1-214ENST00000625244 CLIC3O95833 236 aa11.18□□□□□ -0.62
SNX1-214ENST00000625244 LHBP01229 141 aa11.18□□□□□ -0.62
SNX1-214ENST00000625244 TNFRSF1BP20333 461 aa11.18□□□□□ -0.62
SNX1-214ENST00000625244 CA6P23280 308 aa11.18□□□□□ -0.62
SNX1-214ENST00000625244 VDAC2P45880 294 aaPredicted RBP11.18□□□□□ -0.62
SNX1-214ENST00000625244 OR1E2P47887 323 aa11.18□□□□□ -0.62
SNX1-214ENST00000625244 RPL27P61353 136 aaKnown RBP11.18□□□□□ -0.62
SNX1-214ENST00000625244 BLCAPP62952 87 aa11.18□□□□□ -0.62
SNX1-214ENST00000625244 TRIM25Q14258 630 aaKnown RBP11.18□□□□□ -0.62
SNX1-214ENST00000625244 OR8G1Q15617 311 aa11.18□□□□□ -0.62
SNX1-214ENST00000625244 WDR38Q5JTN6 314 aa11.18□□□□□ -0.62
SNX1-214ENST00000625244 KRT77Q7Z794 578 aa11.18□□□□□ -0.62
SNX1-214ENST00000625244 TMEM219Q86XT9 240 aa11.18□□□□□ -0.62
SNX1-214ENST00000625244 MYDGFQ969H8 173 aa11.18□□□□□ -0.62
SNX1-214ENST00000625244 ASB9Q96DX5 294 aa11.18□□□□□ -0.62
SNX1-214ENST00000625244 MPP4Q96JB8 637 aa11.18□□□□□ -0.62
SNX1-214ENST00000625244 HCAR1Q9BXC0 346 aa11.18□□□□□ -0.62
SNX1-214ENST00000625244 METTL8Q9H825 291 aaKnown RBP11.18□□□□□ -0.62
SNX1-214ENST00000625244 H7C1C5 153 aa11.17□□□□□ -0.62
SNX1-214ENST00000625244 MT-ND1P03886 318 aa11.17□□□□□ -0.62
SNX1-214ENST00000625244 SELLP14151 372 aa11.17□□□□□ -0.62
SNX1-214ENST00000625244 RAB13P51153 203 aa11.17□□□□□ -0.62
SNX1-214ENST00000625244 LCN6P62502 163 aa11.17□□□□□ -0.62
SNX1-214ENST00000625244 IKZF1Q13422 519 aa11.17□□□□□ -0.62
SNX1-214ENST00000625244 GK2Q14410 553 aaPredicted RBP11.17□□□□□ -0.62
SNX1-214ENST00000625244 ARSJQ5FYB0 599 aaPredicted RBP11.17□□□□□ -0.62
SNX1-214ENST00000625244 VTCN1Q7Z7D3 282 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 237 ms