RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 NANSQ9NR45 359 aa4.06□□□□□ -1.76
VPS29-212ENST00000621131 SERINC1Q9NRX5 453 aa4.06□□□□□ -1.76
VPS29-212ENST00000621131 PRR34Q9NV39 138 aa4.06□□□□□ -1.76
VPS29-212ENST00000621131 P4HTMQ9NXG6 502 aa4.06□□□□□ -1.76
VPS29-212ENST00000621131 ZNF226Q9NYT6 803 aa4.06□□□□□ -1.76
VPS29-212ENST00000621131 IL20Q9NYY1 176 aa4.06□□□□□ -1.76
VPS29-212ENST00000621131 DNAJC27Q9NZQ0 273 aa4.06□□□□□ -1.76
VPS29-212ENST00000621131 DAPK2Q9UIK4 370 aa4.06□□□□□ -1.76
VPS29-212ENST00000621131 PPIEQ9UNP9 301 aaKnown RBP4.06□□□□□ -1.76
VPS29-212ENST00000621131 NTNG1Q9Y2I2 539 aa4.06□□□□□ -1.76
VPS29-212ENST00000621131 GRIP1Q9Y3R0 1128 aa4.06□□□□□ -1.76
VPS29-212ENST00000621131 TLN1Q9Y490 2541 aaKnown RBP4.06□□□□□ -1.76
VPS29-212ENST00000621131 PCNX2A6NKB5 2137 aa4.06□□□□□ -1.76
VPS29-212ENST00000621131 NUP214P35658 2090 aaPredicted RBP4.06□□□□□ -1.76
VPS29-212ENST00000621131 PCNX1Q96RV3 2341 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 TRAV36DV7A0A075B6V5 113 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 TRAV27A0A087WT01 109 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 IGHV1-45A0A0A0MS14 117 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 IGHV3-20A0A0C4DH32 117 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 ANKUB1A6NFN9 424 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 MPTX1A8MV57 137 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 A8MVM7 634 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 H3BSA7 217 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 WWP2O00308 870 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 XKRYO14609 159 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 IMPA2O14732 288 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 SURF4O15260 269 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 IDH3BO43837 385 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 AHCYL1O43865 530 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 OR2T1O43869 369 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 BCAS1O75363 584 aaPredicted RBP4.05□□□□□ -1.76
VPS29-212ENST00000621131 TRIM3O75382 744 aaPredicted RBP4.05□□□□□ -1.76
VPS29-212ENST00000621131 AHSA1O95433 338 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 BCL10O95999 233 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 HPP00738 406 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 RENP00797 406 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 MT-ATP6P00846 226 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 STSP08842 583 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 TSPAN19P0C672 248 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 HSMCR30P0CW71 290 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 DBTP11182 482 aaKnown RBP4.05□□□□□ -1.76
VPS29-212ENST00000621131 SPTBP11277 2137 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 CCL4P13236 92 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 PRG2P13727 222 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 FUT1P19526 365 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 TCN2P20062 427 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 FKBP2P26885 142 aaKnown RBP4.05□□□□□ -1.76
VPS29-212ENST00000621131 CD82P27701 267 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 RBMS1P29558 406 aaKnown RBP4.05□□□□□ -1.76
VPS29-212ENST00000621131 OTX2P32243 289 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 PSMB10P40306 273 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 ACAA2P42765 397 aaKnown RBP4.05□□□□□ -1.76
VPS29-212ENST00000621131 SSR4P51571 173 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 ACTC1P68032 377 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 ACTA1P68133 377 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 ZNF117Q03924 483 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 EMX1Q04741 257 aaPredicted RBP4.05□□□□□ -1.76
VPS29-212ENST00000621131 CD226Q15762 336 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 DGUOKQ16854 277 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 SYT14P1Q58G82 188 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 HES3Q5TGS1 186 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 UBE2UQ5VVX9 321 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 RNLSQ5VYX0 342 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 SLC30A6Q6NXT4 461 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 FAM198BQ6UWH4 519 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 TMPRSS11AQ6ZMR5 421 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 DPY19L2P2Q6ZN68 376 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 GRINAQ7Z429 371 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 HDDC2Q7Z4H3 204 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 ADCK1Q86TW2 530 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 MARCH3Q86UD3 253 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 CCDC71Q8IV32 467 aaPredicted RBP4.05□□□□□ -1.76
VPS29-212ENST00000621131 TMEM156Q8N614 296 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 POGLUT1Q8NBL1 392 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 APCDD1LQ8NCL9 501 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 NFAM1Q8NET5 270 aaPredicted RBP4.05□□□□□ -1.76
VPS29-212ENST00000621131 OR4K17Q8NGC6 315 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 OR13C2Q8NGS9 318 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 SMAP2Q8WU79 429 aaPredicted RBP4.05□□□□□ -1.76
VPS29-212ENST00000621131 APH1BQ8WW43 257 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 C12orf43Q96C57 262 aaKnown RBP4.05□□□□□ -1.76
VPS29-212ENST00000621131 SPACA9Q96E40 222 aaPredicted RBP4.05□□□□□ -1.76
VPS29-212ENST00000621131 ARSGQ96EG1 525 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 SAMD8Q96LT4 415 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 SECISBP2Q96T21 854 aaKnown RBP4.05□□□□□ -1.76
VPS29-212ENST00000621131 PRSS27Q9BQR3 290 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 WFDC6Q9BQY6 131 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 TAPBPLQ9BX59 468 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 CDCA4Q9BXL8 241 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 UBQLN3Q9H347 655 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 DSN1Q9H410 356 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 CMC2Q9NRP2 79 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 INPP5EQ9NRR6 644 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 FKBP14Q9NWM8 211 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 HPF1Q9NWY4 346 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 GPR83Q9NYM4 423 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 SEC14L4Q9UDX3 406 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 TEKT2Q9UIF3 430 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 ZNF229Q9UJW7 825 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 ZNF223Q9UK11 482 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms