RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 XRCC2O43543 280 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 NDUFB6O95139 128 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 MT-ND4P03905 459 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 HCKP08631 526 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 GSTP1P09211 210 aaKnown RBP9.1□□□□□ -0.95
VPS25-203ENST00000589520 TMIGD3P0DMS9 266 aaPredicted RBP9.1□□□□□ -0.95
VPS25-203ENST00000589520 VSIG8P0DPA2 414 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 ABOP16442 354 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 ZNF32P17041 273 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 TBPP20226 339 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 PRKACBP22694 351 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 NTF4P34130 210 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 ARR3P36575 388 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 QRFPP83859 136 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 PSG4Q00888 419 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 SRYQ05066 204 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 CD300CQ08708 224 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 PMPCAQ10713 525 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 CBX3Q13185 183 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 MEF2DQ14814 521 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 ZMYND11Q15326 602 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 CNN3Q15417 329 aaKnown RBP9.1□□□□□ -0.95
VPS25-203ENST00000589520 RBMS2Q15434 407 aaKnown RBP9.1□□□□□ -0.95
VPS25-203ENST00000589520 PNLIPRP3Q17RR3 467 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 GSG1Q2KHT4 349 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 RNASE12Q5GAN4 147 aaKnown RBP9.1□□□□□ -0.95
VPS25-203ENST00000589520 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.1□□□□□ -0.95
VPS25-203ENST00000589520 OR5AS1Q8N127 324 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 STEAP2Q8NFT2 490 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 SSC4DQ8WTU2 575 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 ABHD3Q8WU67 409 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 AQP3Q92482 292 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 SGK3Q96BR1 496 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 ZNF775Q96BV0 537 aaPredicted RBP9.1□□□□□ -0.95
VPS25-203ENST00000589520 SEH1LQ96EE3 360 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 S100A13Q99584 98 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 SLC25A21Q9BQT8 299 aaPredicted RBP9.1□□□□□ -0.95
VPS25-203ENST00000589520 HES7Q9BYE0 225 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 PRDM14Q9GZV8 571 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 SLC6A15Q9H2J7 730 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 OR51J1Q9H342 316 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 GHITMQ9H3K2 345 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 NOX3Q9HBY0 568 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 PCDHB16Q9NRJ7 776 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 ZNF319Q9P2F9 582 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 MRPS28Q9Y2Q9 187 aaKnown RBP9.1□□□□□ -0.95
VPS25-203ENST00000589520 N6AMT1Q9Y5N5 214 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 KNTC1P50748 2209 aa9.1□□□□□ -0.95
VPS25-203ENST00000589520 TRAV6A0A075B6T7 132 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 A0A1B0GUH1 482 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 A6NL46 340 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 SNRPGP15A8MWD9 76 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 RAB27BO00194 218 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 TM4SF5O14894 197 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 LMX1BO60663 402 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 ICMTO60725 284 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 ZNF780AO75290 641 aaPredicted RBP9.09□□□□□ -0.95
VPS25-203ENST00000589520 IGHG3P01860 377 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 C1QBP02746 253 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 SERPINA5P05154 406 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 CELA3AP09093 270 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 SLC2A1P11166 492 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 CBX5P45973 191 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 PPA1Q15181 289 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 SF3B4Q15427 424 aaKnown RBP eCLIP9.09□□□□□ -0.956e-21■■■■■ 46.2
VPS25-203ENST00000589520 TGIF1Q15583 401 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 KCNJ8Q15842 424 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 ZNF260Q3ZCT1 412 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 TSPO2Q5TGU0 170 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 SFRP4Q6FHJ7 346 aaPredicted RBP9.09□□□□□ -0.95
VPS25-203ENST00000589520 TMEM53Q6P2H8 277 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 GLIPR1L1Q6UWM5 242 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 NOXA1Q86UR1 476 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 GLCCI1Q86VQ1 547 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 SKA3Q8IX90 412 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 TUSC5Q8IXB3 177 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 CCDC36Q8IYA8 594 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 ZNF101Q8IZC7 436 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 PAQR4Q8N4S7 273 aaPredicted RBP9.09□□□□□ -0.95
VPS25-203ENST00000589520 OR56B1Q8NGI3 324 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 OR10R2Q8NGX6 335 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 ZNF837Q96EG3 531 aaPredicted RBP9.09□□□□□ -0.95
VPS25-203ENST00000589520 ZNF486Q96H40 463 aaPredicted RBP9.09□□□□□ -0.95
VPS25-203ENST00000589520 WDYHV1Q96HA8 205 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 ALKBH3Q96Q83 286 aaPredicted RBP9.09□□□□□ -0.95
VPS25-203ENST00000589520 GPER1Q99527 375 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 ALX4Q9H161 411 aaPredicted RBP9.09□□□□□ -0.95
VPS25-203ENST00000589520 C20orf85Q9H1P6 137 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 OPA3Q9H6K4 179 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 RANBP3Q9H6Z4 567 aaPredicted RBP9.09□□□□□ -0.95
VPS25-203ENST00000589520 SCP2D1Q9UJQ7 156 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 ING4Q9UNL4 249 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 PIGLQ9Y2B2 252 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 EML6Q6ZMW3 1958 aa9.09□□□□□ -0.95
VPS25-203ENST00000589520 CEP295Q9C0D2 2601 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 DISC1C4P0D8 188 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 NKX2-8O15522 239 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 GMDSO60547 372 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 CA11O75493 328 aa9.08□□□□□ -0.96
VPS25-203ENST00000589520 CEACAM4O75871 244 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms