RNA–Protein interactions for RNA: ENST00000588852.1

SAFB-205, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 2,842 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-205ENST00000588852 GPER1Q99527 375 aa13.48□□□□□ -0.25
SAFB-205ENST00000588852 LMAN1LQ9HAT1 526 aa13.48□□□□□ -0.25
SAFB-205ENST00000588852 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.48□□□□□ -0.25
SAFB-205ENST00000588852 NDUFA2O43678 99 aa13.48□□□□□ -0.25
SAFB-205ENST00000588852 GIMD1P0DJR0 217 aa13.48□□□□□ -0.25
SAFB-205ENST00000588852 LAP3P28838 519 aa13.48□□□□□ -0.25
SAFB-205ENST00000588852 C17orf67Q0P5P2 114 aa13.48□□□□□ -0.25
SAFB-205ENST00000588852 PGAP1Q75T13 922 aa13.48□□□□□ -0.25
SAFB-205ENST00000588852 OR10G3Q8NGC4 313 aa13.48□□□□□ -0.25
SAFB-205ENST00000588852 ZNF501Q96CX3 271 aaPredicted RBP13.48□□□□□ -0.25
SAFB-205ENST00000588852 HRH4Q9H3N8 390 aa13.48□□□□□ -0.25
SAFB-205ENST00000588852 CA14Q9ULX7 337 aa13.48□□□□□ -0.25
SAFB-205ENST00000588852 IGKV1-9A0A0C4DH69 117 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 ANKUB1A6NFN9 424 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 VSTM2BA6NLU5 285 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 CDC14BO60729 498 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 HOXB5P09067 269 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 NFYBP25208 207 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 CD27P26842 260 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 ID4P47928 161 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 CLRN1P58418 232 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 PABPC1L2AQ5JQF8 200 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 CDCP2Q5VXM1 449 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 LINC00518Q8N0U6 118 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 MVB12AQ96EY5 273 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 PIGMQ9H3S5 423 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 ACKR4Q9NPB9 350 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 TRBV11-1A0A0K0K1C0 115 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 AGPAT2O15120 278 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 ARFRP1Q13795 201 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 DEGS2Q6QHC5 323 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 D2HGDHQ8N465 521 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 POC1BQ8TC44 478 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 OR5B2Q96R09 309 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 MRPL13Q9BYD1 178 aaKnown RBP13.47□□□□□ -0.25
SAFB-205ENST00000588852 AKIRIN1Q9H9L7 192 aaPredicted RBP13.47□□□□□ -0.25
SAFB-205ENST00000588852 UCK1Q9HA47 277 aa13.47□□□□□ -0.25
SAFB-205ENST00000588852 F8W036 122 aa13.46□□□□□ -0.25
SAFB-205ENST00000588852 MTRF1O75570 445 aaKnown RBP13.46□□□□□ -0.25
SAFB-205ENST00000588852 KNG1P01042 644 aa13.46□□□□□ -0.25
SAFB-205ENST00000588852 RCC1P18754 421 aaPredicted RBP13.46□□□□□ -0.25
SAFB-205ENST00000588852 RPL35P42766 123 aaKnown RBP13.46□□□□□ -0.25
SAFB-205ENST00000588852 BLOC1S1P78537 153 aa13.46□□□□□ -0.25
SAFB-205ENST00000588852 ZP4Q12836 540 aa13.46□□□□□ -0.25
SAFB-205ENST00000588852 AIMP2Q13155 320 aaKnown RBP13.46□□□□□ -0.25
SAFB-205ENST00000588852 CLEC9AQ6UXN8 241 aa13.46□□□□□ -0.25
SAFB-205ENST00000588852 BAP18Q8IXM2 172 aa13.46□□□□□ -0.25
SAFB-205ENST00000588852 SLC25A45Q8N413 288 aa13.46□□□□□ -0.25
SAFB-205ENST00000588852 RTBDNQ9BSG5 229 aaPredicted RBP13.46□□□□□ -0.25
SAFB-205ENST00000588852 PARP12Q9H0J9 701 aaKnown RBP13.46□□□□□ -0.25
SAFB-205ENST00000588852 ZNF107Q9UII5 783 aaPredicted RBP13.46□□□□□ -0.25
SAFB-205ENST00000588852 PURGQ9UJV8 347 aaKnown RBP13.46□□□□□ -0.25
SAFB-205ENST00000588852 GPR132Q9UNW8 380 aa13.46□□□□□ -0.25
SAFB-205ENST00000588852 TNRC18O15417 2968 aaPredicted RBP13.46□□□□□ -0.25
SAFB-205ENST00000588852 GDF9O60383 454 aa13.46□□□□□ -0.25
SAFB-205ENST00000588852 HIST1H1DP16402 221 aaKnown RBP13.46□□□□□ -0.25
SAFB-205ENST00000588852 NPBWR1P48145 328 aa13.46□□□□□ -0.25
SAFB-205ENST00000588852 AKR1D1P51857 326 aa13.46□□□□□ -0.25
SAFB-205ENST00000588852 RAB32Q13637 225 aa13.46□□□□□ -0.25
SAFB-205ENST00000588852 SHEQ5VZ18 495 aa13.46□□□□□ -0.25
SAFB-205ENST00000588852 ZNF585AQ6P3V2 769 aa13.46□□□□□ -0.25
SAFB-205ENST00000588852 SYT13Q7L8C5 426 aa13.46□□□□□ -0.25
SAFB-205ENST00000588852 DDIT4LQ96D03 193 aa13.46□□□□□ -0.25
SAFB-205ENST00000588852 TMEM59Q9BXS4 323 aa13.46□□□□□ -0.25
SAFB-205ENST00000588852 TREM1Q9NP99 234 aa13.46□□□□□ -0.25
SAFB-205ENST00000588852 SLC2A4RGQ9NR83 387 aa13.46□□□□□ -0.25
SAFB-205ENST00000588852 RPH3AQ9Y2J0 694 aaPredicted RBP13.46□□□□□ -0.25
SAFB-205ENST00000588852 IGKV1D-8A0A087WSZ0 117 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.45□□□□□ -0.26
SAFB-205ENST00000588852 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.45□□□□□ -0.26
SAFB-205ENST00000588852 APOBEC1P41238 236 aaKnown RBP13.45□□□□□ -0.26
SAFB-205ENST00000588852 HNRNPKP61978 463 aaKnown RBP eCLIP13.45□□□□□ -0.265e-6■■■■□ 21.6
SAFB-205ENST00000588852 TMEM128Q5BJH2 165 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 ZNF529Q6P280 563 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 OR13G1Q8NGZ3 307 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 PHYHIPLQ96FC7 376 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 UQCC2Q9BRT2 126 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 METTL8Q9H825 291 aaKnown RBP13.45□□□□□ -0.26
SAFB-205ENST00000588852 ZNF581Q9P0T4 197 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 KLHL13Q9P2N7 655 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 A0A1B0GW55 424 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 CCDC85CA6NKD9 419 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 ZNF705EA8MWA4 302 aaPredicted RBP13.45□□□□□ -0.26
SAFB-205ENST00000588852 OR2J2O76002 312 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 FAM157CP0CG43 387 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 DUX4L2P0CJ85 424 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 DUX4L3P0CJ86 424 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 DUX4L4P0CJ87 422 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 DUX4L5P0CJ88 424 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 DUX4L6P0CJ89 424 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 DUX4L7P0CJ90 424 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 S100A10P60903 97 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 SMAD4Q13485 552 aaKnown RBP13.45□□□□□ -0.26
SAFB-205ENST00000588852 PRAMEF20Q5VT98 475 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 AADACL3Q5VUY0 350 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 OR2AJ1Q8NGZ0 328 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 SLC6A15Q9H2J7 730 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 DUX4Q9UBX2 424 aa13.45□□□□□ -0.26
SAFB-205ENST00000588852 TEX13DA0A0J9YY54 714 aaPredicted RBP13.45□□□□□ -0.26
SAFB-205ENST00000588852 PIAS2O75928 621 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms