RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, human

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF540-204	ENST00000586792	FBP2	O00757	339 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	GPR171	O14626	319 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	EIF1B	O60739	113 aa	Known RBP	4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	TNFSF13	O75888	250 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	SCGN	O76038	276 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	AQP8	O94778	261 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	CGA	P01215	116 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	SFTPB	P07988	381 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	TFPT	P0C1Z6	253 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	FCGR1A	P12314	374 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	ETS2	P15036	469 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	RAB4A	P20338	218 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	EDN2	P20800	178 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	HNF1A	P20823	631 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	TACR3	P29371	465 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	CD40LG	P29965	261 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	AGTR1	P30556	359 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	IFNA8	P32881	189 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	MTCP1	P56278	107 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	OR2B6	P58173	313 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	GNG2	P59768	71 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	CDK6	Q00534	326 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	KEAP1	Q14145	624 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	RGN	Q15493	299 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	MAPK14	Q16539	360 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	PNLIPRP3	Q17RR3	467 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	LRRC36	Q1X8D7	754 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	CTU2	Q2VPK5	515 aa	Known RBP	4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	GTDC1	Q4AE62	458 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	THEM4	Q5T1C6	240 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	REEP3	Q6NUK4	255 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	FAM159A	Q6UWV7	190 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	ZNF836	Q6ZNA1	936 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	LINC00299	Q6ZSB3	139 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	DCXR	Q7Z4W1	244 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	RANBP3L	Q86VV4	465 aa	Predicted RBP	4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	MEX3D	Q86XN8	651 aa	Known RBP	4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	VRK2	Q86Y07	508 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	SLC30A8	Q8IWU4	369 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	CCDC36	Q8IYA8	594 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	ZNF100	Q8IYN0	542 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	FBXL14	Q8N1E6	418 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	OR5D13	Q8NGL4	314 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	LINC01560	Q8TB33	94 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	PIGX	Q8TBF5	258 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	RNF128	Q8TEB7	428 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	ABHD3	Q8WU67	409 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	SLC38A5	Q8WUX1	472 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	MYDGF	Q969H8	173 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	MAL2	Q969L2	176 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	STARD4	Q96DR4	205 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	ADGRG7	Q96K78	797 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	LRR1	Q96L50	414 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	PRR25	Q96S07	402 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	ELOVL1	Q9BW60	279 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	IFT27	Q9BW83	186 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	ANKRD60	Q9BZ19	345 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	KCNN2	Q9H2S1	579 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	GAL3ST2	Q9H3Q3	398 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	RANBP3	Q9H6Z4	567 aa	Predicted RBP	4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	A4GALT	Q9NPC4	353 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	CTPS2	Q9NRF8	586 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	ACER3	Q9NUN7	267 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	FGFR1OP2	Q9NVK5	253 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	TMEM181	Q9P2C4	612 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	TMED7	Q9Y3B3	224 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	HDGFL3	Q9Y3E1	203 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	CEPT1	Q9Y6K0	416 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	DOPEY1	Q5JWR5	2465 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	ZNF407	Q9C0G0	2248 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	MYO7B	Q6PIF6	2116 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	HECTD1	Q9ULT8	2610 aa		4.06	□□□□□ -1.76
ZNF540-204	ENST00000586792	LRRK2	Q5S007	2527 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	POLE	Q07864	2286 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	DIDO1	Q9BTC0	2240 aa	Known RBP	4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	DSPP	Q9NZW4	1301 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792		A0A087X0K7	114 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	RAB19	A4D1S5	217 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	DPPA5	A6NC42	116 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	FAM172BP	A6NC97	362 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	CLDN24	A6NM45	220 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	PPIAL4D	F5H284	164 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	FAAH	O00519	579 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	MRAS	O14807	208 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	ARPC3	O15145	178 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	NDUFA2	O43678	99 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	CCDC22	O60826	627 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	MRPL33	O75394	65 aa	Known RBP	4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	KRT33A	O76009	404 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	CCNB2	O95067	398 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	PMS2P2	O95744	297 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	GPI	P06744	558 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	DANCR	P0C864	163 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	GKN3P	P0CG01	181 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	CCL2	P13500	99 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	ITGA2	P17301	1181 aa		4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	TCN1	P20061	433 aa	Predicted RBP	4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	RPS4Y1	P22090	263 aa	Known RBP	4.05	□□□□□ -1.76
ZNF540-204	ENST00000586792	SHC1	P29353	583 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms