RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 ANK3Q12955 4377 aaKnown RBP8.43□□□□□ -1.06
GGA3-209ENST00000580646 A0A096LNT2 108 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 TMEM269A0A1B0GVZ9 245 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 A0A1B0GWJ7 208 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 A0A1W2PPW3 197 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 DAPL1A0PJW8 107 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 EFCAB10A6NFE3 127 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 METTL15A6NJ78 407 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 TRIM64CA6NLI5 447 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 DENRO43583 198 aaKnown RBP8.43□□□□□ -1.06
GGA3-209ENST00000580646 FAM20BO75063 409 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 LY6HO94772 140 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 APOL3O95236 402 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 CLPTM1O96005 669 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 IGLV3-1P01715 115 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 ANXA2P07355 339 aaKnown RBP8.43□□□□□ -1.06
GGA3-209ENST00000580646 ERCC1P07992 297 aaPredicted RBP8.43□□□□□ -1.06
GGA3-209ENST00000580646 CSF3P09919 207 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 OCM2P0CE71 109 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 OCMP0CE72 109 aaPredicted RBP8.43□□□□□ -1.06
GGA3-209ENST00000580646 SLC25A16P16260 332 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 MPV17P39210 176 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 DDOSTP39656 456 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 SMN1Q16637 294 aaKnown RBP8.43□□□□□ -1.06
GGA3-209ENST00000580646 NKPD1Q17RQ9 610 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 PCGF3Q3KNV8 242 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 C6orf141Q5SZD1 244 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 SPATA46Q5T0L3 261 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 LAIR2Q6ISS4 152 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 FDX2Q6P4F2 183 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 PGAP1Q75T13 922 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 KRT74Q7RTS7 529 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 FAM220AQ7Z4H9 259 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 C10orf105Q8TEF2 133 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 NEU4Q8WWR8 484 aaPredicted RBP8.43□□□□□ -1.06
GGA3-209ENST00000580646 CMBLQ96DG6 245 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 SORCS2Q96PQ0 1159 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 TBX5Q99593 518 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 SYT3Q9BQG1 590 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 RAB1BQ9H0U4 201 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 POFUT1Q9H488 388 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 AMBNQ9NP70 447 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 MYOZ1Q9NP98 299 aaPredicted RBP8.43□□□□□ -1.06
GGA3-209ENST00000580646 ERVK13-1Q9NX77 482 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 PTTG3PQ9NZH4 202 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 TAAR3PQ9P1P4 343 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 MYEF2Q9P2K5 600 aaKnown RBP8.43□□□□□ -1.06
GGA3-209ENST00000580646 NUFIP1Q9UHK0 495 aaKnown RBP8.43□□□□□ -1.06
GGA3-209ENST00000580646 PSORS1C1Q9UIG5 152 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 DUSP13Q9UII6 198 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 ZDHHC8Q9ULC8 765 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 FZR1Q9UM11 496 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 MYRFQ9Y2G1 1151 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 EXOSC1Q9Y3B2 195 aaKnown RBP8.43□□□□□ -1.06
GGA3-209ENST00000580646 SNX5Q9Y5X3 404 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 JMJD1CQ15652 2540 aa8.43□□□□□ -1.06
GGA3-209ENST00000580646 LOC390937A0A1W2PQ73 354 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 PLSCR5A0PG75 271 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 FUOMA2VDF0 154 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 CCDC160A6NGH7 325 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 C17orf100A8MU93 164 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 LOC110117498-PIK3R3F6TDL0 507 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 SLC1A7O00341 560 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 CD5LO43866 347 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 CRLF1O75462 422 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 TNFAIP8O95379 198 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 CD55P08174 381 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 LIMS3P0CW19 117 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 LIMS4P0CW20 117 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 SLC2A1P11166 492 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 ATP6V1B1P15313 513 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 EIF2B2P49770 351 aaKnown RBP8.42□□□□□ -1.06
GGA3-209ENST00000580646 PDLIM4P50479 330 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 LOXL1Q08397 574 aaPredicted RBP8.42□□□□□ -1.06
GGA3-209ENST00000580646 HLXQ14774 488 aaPredicted RBP8.42□□□□□ -1.06
GGA3-209ENST00000580646 OR8B8Q15620 311 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 TIGD6Q17RP2 521 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 TMEM255AQ5JRV8 349 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 GLYATL3Q5SZD4 288 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 LIPNQ5VXI9 398 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 RNLSQ5VYX0 342 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 Q6ZSR3 168 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 FAM57BQ71RH2 274 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 MRPL21Q7Z2W9 205 aaKnown RBP8.42□□□□□ -1.06
GGA3-209ENST00000580646 YIPF7Q8N8F6 280 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 CCDC54Q8NEL0 328 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 OR8G5Q8NG78 346 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 OR8B12Q8NGG6 310 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 GGHQ92820 318 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 SGK3Q96BR1 496 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 TMEM80Q96HE8 168 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 PGAM5Q96HS1 289 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 ALG8Q9BVK2 526 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 PBOV1Q9GZY1 135 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 SLC22A4Q9H015 551 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 DYNLRB1Q9NP97 96 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 G6PC2Q9NQR9 355 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 YAE1D1Q9NRH1 226 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 SCN3BQ9NY72 215 aa8.42□□□□□ -1.06
GGA3-209ENST00000580646 NOP16Q9Y3C1 178 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms