RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 HNRNPKP61978 463 aaKnown RBP eCLIP9.43□□□□□ -0.9
USB1-212ENST00000566082 MRPS34P82930 218 aaKnown RBP9.43□□□□□ -0.9
USB1-212ENST00000566082 MFAP5Q13361 173 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 LILRB2Q8N423 598 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 PRR18Q8N4B5 295 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 OR5AP2Q8NGF4 316 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 MITD1Q8WV92 249 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 ALX4Q9H161 411 aaPredicted RBP9.43□□□□□ -0.9
USB1-212ENST00000566082 METTL9Q9H1A3 318 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 TMEM74BQ9NUR3 256 aa9.43□□□□□ -0.9
USB1-212ENST00000566082 DDAH2O95865 285 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 SERPINE2P07093 398 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 GSTP1P09211 210 aaKnown RBP9.42□□□□□ -0.9
USB1-212ENST00000566082 CT45A8P0DMV1 189 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 CT45A9P0DMV2 189 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 MALLQ13021 153 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 C4orf17Q53FE4 359 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 CT45A2Q5DJT8 189 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 PRSS54Q6PEW0 395 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 TFAP2EQ6VUC0 442 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.42□□□□□ -0.9
USB1-212ENST00000566082 PIGCQ92535 297 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 RRNAD1Q96FB5 475 aaKnown RBP9.42□□□□□ -0.9
USB1-212ENST00000566082 RPP25Q9BUL9 199 aaKnown RBP9.42□□□□□ -0.9
USB1-212ENST00000566082 ULBP2Q9BZM5 246 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 LPAR3Q9UBY5 353 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 KLK13Q9UKR3 277 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 hCG_1809904A0A1W2PP81 198 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 A0A1W2PR64 198 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 A0A1W2PRV1 198 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 A6NLC8 198 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 ZNF724A8MTY0 619 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 CELA2BP08218 269 aaPredicted RBP9.42□□□□□ -0.9
USB1-212ENST00000566082 FOSL2P15408 326 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 DRD1P21728 446 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 ABCD3P28288 659 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 PTGFRP43088 359 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 C5orf46Q6UWT4 87 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 MCEMP1Q8IX19 187 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 SKA3Q8IX90 412 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 OR1J1Q8NGS3 322 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 OCSTAMPQ9BR26 566 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 ZNF286AQ9HBT8 521 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 CHST11Q9NPF2 352 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 FBXL17Q9UF56 701 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 C19orf25Q9UFG5 118 aaPredicted RBP9.42□□□□□ -0.9
USB1-212ENST00000566082 PIGLQ9Y2B2 252 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 AMDHD2Q9Y303 409 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 MSTNO14793 375 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 PNPP00491 289 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 OR5H8P0DN80 308 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 MPGP29372 298 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 RPL23AP62750 156 aaKnown RBP9.42□□□□□ -0.9
USB1-212ENST00000566082 NR0B2Q15466 257 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 NCMAPQ5T1S8 102 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 JMJD6Q6NYC1 403 aaPredicted RBP9.42□□□□□ -0.9
USB1-212ENST00000566082 CLEC18BQ6UXF7 455 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 C16orf47Q6ZP98 133 aaPredicted RBP9.42□□□□□ -0.9
USB1-212ENST00000566082 SPRED2Q7Z698 418 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 FGF14Q92915 247 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 SSX3Q99909 188 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 KLHL13Q9P2N7 655 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 ZMAT5Q9UDW3 170 aaKnown RBP9.42□□□□□ -0.9
USB1-212ENST00000566082 MIOXQ9UGB7 285 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 UNC13CQ8NB66 2214 aa9.42□□□□□ -0.9
USB1-212ENST00000566082 A0A087WZY1 265 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 G3V3Y1 287 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 SFT2D2O95562 160 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 CST4P01036 141 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 ZNF121P58317 390 aaPredicted RBP9.41□□□□□ -0.9
USB1-212ENST00000566082 ZNF345Q14585 488 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 SLC36A1Q7Z2H8 476 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 CMTM1Q8IZ96 169 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 LGI3Q8N145 548 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 GPR137CQ8N3F9 429 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 ZFP62Q8NB50 900 aaPredicted RBP9.41□□□□□ -0.9
USB1-212ENST00000566082 OR51F2Q8NH61 342 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 IL1F10Q8WWZ1 152 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 ROBO4Q8WZ75 1007 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 PRRX2Q99811 253 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 PAPOLGQ9BWT3 736 aaKnown RBP9.41□□□□□ -0.9
USB1-212ENST00000566082 GPR173Q9NS66 373 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 FAM86C1Q9NVL1 165 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 MMACHCQ9Y4U1 282 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 TMEM184BQ9Y519 407 aaPredicted RBP9.41□□□□□ -0.9
USB1-212ENST00000566082 TRBV5-5A0A0J9YX44 114 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 A0A1W2PPH5 198 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 ZFP92A6NM28 416 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 SOCS1O15524 211 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 CD1AP06126 327 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 QDPRP09417 244 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 H2AFB1P0C5Y9 115 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 HIST1H1DP16402 221 aaKnown RBP9.41□□□□□ -0.9
USB1-212ENST00000566082 DVL1P1P54792 670 aaPredicted RBP9.41□□□□□ -0.9
USB1-212ENST00000566082 PIGPP57054 158 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 ISXQ2M1V0 245 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 LINC01590Q5TEZ4 76 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 TMEM104Q8NE00 496 aa9.41□□□□□ -0.9
USB1-212ENST00000566082 CPNE4Q96A23 557 aaPredicted RBP9.41□□□□□ -0.9
USB1-212ENST00000566082 CLCC1Q96S66 551 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms