RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ZNF32P17041 273 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 MYL12AP19105 171 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 CRYGSP22914 178 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 TUBG1P23258 451 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 CRHBPP24387 322 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 PTAFRP25105 342 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 OTX1P32242 354 aaPredicted RBP4.95□□□□□ -1.62
SCAF11-213ENST00000550629 OPRL1P41146 370 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 NAA10P41227 235 aaPredicted RBP4.95□□□□□ -1.62
SCAF11-213ENST00000550629 NR1H2P55055 460 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 GABARAPL2P60520 117 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 GRB2P62993 217 aaKnown RBP4.95□□□□□ -1.62
SCAF11-213ENST00000550629 PSG4Q00888 419 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 MRPL28Q13084 256 aaKnown RBP4.95□□□□□ -1.62
SCAF11-213ENST00000550629 EIF2B1Q14232 305 aaKnown RBP4.95□□□□□ -1.62
SCAF11-213ENST00000550629 DAZAP2Q15038 168 aaPredicted RBP4.95□□□□□ -1.62
SCAF11-213ENST00000550629 TSC22D1Q15714 1073 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 MEP1BQ16820 701 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 KRTAP27-1Q3LI81 207 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 KCTD21Q4G0X4 260 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 RNASE12Q5GAN4 147 aaKnown RBP4.95□□□□□ -1.62
SCAF11-213ENST00000550629 PABPC1L2AQ5JQF8 200 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 ELFN2Q5R3F8 820 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF626Q68DY1 528 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 ARL9Q6T311 187 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 UNQ6126/PRO20091Q6UXV3 157 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 CFAP77Q6ZQR2 320 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 PLEKHG7Q6ZR37 379 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 DPY19L4Q7Z388 723 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 DCXRQ7Z4W1 244 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 MDP1Q86V88 176 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 SLC35F2Q8IXU6 374 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 SYS1Q8N2H4 156 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF786Q8N393 782 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 LRRC18Q8N456 261 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 OR51G2Q8NGK0 314 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 OR6N2Q8NGY6 317 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 OR52N5Q8NH56 324 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 OR1F12Q8NHA8 337 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 ITFG2Q969R8 447 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 SPTSSAQ969W0 71 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 TMEM80Q96HE8 168 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 RITA1Q96K30 269 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF75AQ96N20 296 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 FOXN4Q96NZ1 517 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 COQ7Q99807 217 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 ATF6BQ99941 703 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 ABHD6Q9BV23 337 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 CDCA4Q9BXL8 241 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 QTRT1Q9BXR0 403 aaKnown RBP4.95□□□□□ -1.62
SCAF11-213ENST00000550629 WNT5BQ9H1J7 359 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 ESRP2Q9H6T0 727 aaKnown RBP4.95□□□□□ -1.62
SCAF11-213ENST00000550629 RNF121Q9H920 327 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 SP140LQ9H930 580 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 TUBG2Q9NRH3 451 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 PLEK2Q9NYT0 353 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 UBAP1Q9NZ09 502 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 LAMP5Q9UJQ1 280 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 PCDHGB5Q9Y5G0 923 aa4.95□□□□□ -1.62
SCAF11-213ENST00000550629 UTP20O75691 2785 aaKnown RBP4.95□□□□□ -1.62
SCAF11-213ENST00000550629 A0A1W2PQL4 384 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-213ENST00000550629 TMEM129A0AVI4 362 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 DAPL1A0PJW8 107 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 TRIM64A6NGJ6 449 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 PRSS44E7EML9 344 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 H3BSA7 217 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 H7C1Q1 480 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 RER1O15258 196 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 SYNGR3O43761 229 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 DOK2O60496 412 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 TNFAIP8O95379 198 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 CRYAAP02489 173 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 KRT8P05787 483 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 CDK1P06493 297 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 MRPL3P09001 348 aaKnown RBP4.94□□□□□ -1.62
SCAF11-213ENST00000550629 CECR9P0C854 216 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 RNF224P0DH78 156 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF35P13682 527 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 STOMP27105 288 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 APLNRP35414 380 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 RGS6P49758 472 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 GDI2P50395 445 aaKnown RBP4.94□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF83P51522 516 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 SLC35A2P78381 396 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 ST3GAL4Q11206 333 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 GALEQ14376 348 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 TBC1D28Q2M2D7 210 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 CDONQ4KMG0 1287 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 CCDC92Q53HC0 331 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-213ENST00000550629 BEX5Q5H9J7 111 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF684Q5T5D7 378 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF774Q6NX45 483 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 CORO6Q6QEF8 472 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF322Q6U7Q0 402 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-213ENST00000550629 DRAM2Q6UX65 266 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 B3GLCTQ6Y288 498 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 TMPRSS11AQ6ZMR5 421 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 MEX3BQ6ZN04 569 aaKnown RBP4.94□□□□□ -1.62
SCAF11-213ENST00000550629 PRSS48Q7RTY5 328 aa4.94□□□□□ -1.62
SCAF11-213ENST00000550629 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms