RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 C6orf201Q7Z4U5 140 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 OR10R2Q8NGX6 335 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 AKR7LQ8NHP1 331 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 IFI44Q8TCB0 444 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 RPS4Y2Q8TD47 263 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 ELP5Q8TE02 316 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 SHDQ96IW2 340 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 SPSB2Q99619 263 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 SLC25A21Q9BQT8 299 aaPredicted RBP12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 HPF1Q9NWY4 346 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 NPTNQ9Y639 398 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 OR2A4O95047 310 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 F12P00748 615 aaPredicted RBP12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 MICBQ29980 383 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 ATRAIDQ6UW56 229 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 ZNF813Q6ZN06 617 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 C17orf82Q86X59 251 aaPredicted RBP12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 PNLDC1Q8NA58 520 aaKnown RBP12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 TMEM229BQ8NBD8 167 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 NOXO1Q8NFA2 376 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 OR2A7Q96R45 310 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 TRAF4Q9BUZ4 470 aaPredicted RBP12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 ULBP2Q9BZM5 246 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 DOCK10Q96BY6 2186 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 TRAV14DV4A0A0A6YYC5 116 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 TEX13DA0A0J9YY54 714 aaPredicted RBP12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 B4GALT1P15291 398 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 ZNF468Q5VIY5 522 aaPredicted RBP12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 C12orf10Q9HB07 376 aa12.08□□□□□ -0.48
PRPF40B-209ENST00000548825 NBASA2RRP1 2371 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 OR6C76A6NM76 312 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 TP53I11O14683 189 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 IFI6P09912 130 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 SP6Q3SY56 376 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 CHRFAM7AQ494W8 412 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 TCEAL6Q6IPX3 200 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 ZNF441Q8N8Z8 693 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 WDSUB1Q8N9V3 476 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 THRSPQ92748 146 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 TCEAL3Q969E4 200 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 UCK1Q9HA47 277 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 PLEKHJ1Q9NW61 149 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 SLC39A1Q9NY26 324 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 EMC3Q9P0I2 261 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 ZNF581Q9P0T4 197 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 KIAA2026Q5HYC2 2103 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 C9orf170A2RU37 121 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 B8ZZF3 427 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 CSTBP04080 98 aaKnown RBP12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 ITGB2P05107 769 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 ZNF260Q3ZCT1 412 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 THEM4Q5T1C6 240 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 FOXRED1Q96CU9 486 aaPredicted RBP12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 SLC6A15Q9H2J7 730 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 HRH4Q9H3N8 390 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 C19orf25Q9UFG5 118 aaPredicted RBP12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 PCDHGA1Q9Y5H4 931 aa12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 TNRC18O15417 2968 aaPredicted RBP12.07□□□□□ -0.48
PRPF40B-209ENST00000548825 RAD51DO75771 328 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 MMP16P51512 607 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 PLAC9Q5JTB6 97 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 PHYHD1Q5SRE7 291 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 MISPQ8IVT2 679 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 NKAIN3Q8N8D7 197 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 NFAM1Q8NET5 270 aaPredicted RBP12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 TREM1Q9NP99 234 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 B3GALT1Q9Y5Z6 326 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 LRP4O75096 1905 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 OR14I1A6ND48 311 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 RFPL4AA6NLU0 287 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 ZNF705EA8MWA4 302 aaPredicted RBP12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 C9J4A7 227 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 RFPL4AL1F8VTS6 287 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 TRAF3IP2O43734 574 aaPredicted RBP12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 SERPINA5P05154 406 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 CCL2P13500 99 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 CSRP1P21291 193 aaKnown RBP12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 MTCP1P56278 107 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 SHBQ15464 509 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 GLRX5Q86SX6 157 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 SLC51BQ86UW2 128 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 CDH26Q8IXH8 852 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 PXT1Q8NFP0 134 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 MRGPRX4Q96LA9 322 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 RABL2AQ9UBK7 228 aaPredicted RBP12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 RABL2BQ9UNT1 228 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 CFAP47Q6ZTR5 3102 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 IGFBP3P17936 291 aaPredicted RBP12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 EPHA8P29322 1005 aaPredicted RBP12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 AIMP2Q13155 320 aaKnown RBP12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 KISS1Q15726 138 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 TSPO2Q5TGU0 170 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 C11orf87Q6NUJ2 197 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 ZNF585AQ6P3V2 769 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 WDR74Q6RFH5 385 aaPredicted RBP12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 PRSS42Q7Z5A4 293 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 RABEPKQ7Z6M1 372 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 LYG2Q86SG7 212 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 OR5T2Q8NGG2 359 aa12.06□□□□□ -0.48
PRPF40B-209ENST00000548825 PRELID1Q9Y255 219 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms