RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897	AGA	P20933	346 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	CXCR1	P25024	350 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	PTGER4	P35408	488 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	APOBEC1	P41238	236 aa	Known RBP	3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	RAB13	P51153	203 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	RNF4	P78317	190 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	PJVK	Q0ZLH3	352 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	SHH	Q15465	462 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	SURF2	Q15527	256 aa	Predicted RBP	3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	TMEM71	Q6P5X7	295 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	LANCL3	Q6ZV70	420 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	ZNF584	Q8IVC4	421 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	OR51F2	Q8NH61	342 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	TMEM54	Q969K7	222 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	TGM7	Q96PF1	710 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	TAAR9	Q96RI9	348 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	PROK2	Q9HC23	129 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	SERINC1	Q9NRX5	453 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	ALKBH4	Q9NXW9	302 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	MUC3A	Q02505	3323 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	IGHV1OR21-1	A0A087WYE8	117 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	KANTR	A0A1W2PQU2	76 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	UBE2C	O00762	179 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	PPIH	O43447	177 aa	Known RBP	3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	MBTPS2	O43462	519 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	LRP3	O75074	770 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	APOC3	P02656	99 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	GAPDH	P04406	335 aa	Known RBP	3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	HPN	P05981	417 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	CHRM2	P08172	466 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	OR1D4	P47884	311 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	DAP3	P51398	398 aa	Known RBP	3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	SKP1	P63208	163 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	IL13RA1	P78552	427 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	SGCA	Q16586	387 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	HYAL4	Q2M3T9	481 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	C10orf128	Q5T292	105 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897		Q6ZS52	159 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897		Q7L0L9	218 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	ZNF627	Q7L945	461 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	CD163	Q86VB7	1156 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	ANGPTL5	Q86XS5	388 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	SLC38A9	Q8NBW4	561 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	NOXO1	Q8NFA2	376 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	ELP5	Q8TE02	316 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	SLC25A43	Q8WUT9	341 aa	Predicted RBP	3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	CMKLR1	Q99788	373 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	CERS4	Q9HA82	394 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	CHMP1A	Q9HD42	196 aa	Predicted RBP	3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	PARP11	Q9NR21	331 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	ZNF629	Q9UEG4	869 aa	Predicted RBP	3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	FOXD3	Q9UJU5	478 aa	Predicted RBP	3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	LMO7DN	F2Z398	122 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	XKRY	O14609	159 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	RAMP1	O60894	148 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	MTRF1	O75570	445 aa	Known RBP	3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	DEDD	O75618	318 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	ADAP1	O75689	374 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	F12	P00748	615 aa	Predicted RBP	3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	PMP2	P02689	132 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	GP1BB	P13224	206 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	RCC1	P18754	421 aa	Predicted RBP	3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	LAP3	P28838	519 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	NR0B1	P51843	470 aa	Known RBP	3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	ARHGDIB	P52566	201 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	TAS2R31	P59538	309 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	ENDOG	Q14249	297 aa	Known RBP	3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	OR7A5	Q15622	319 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	GFOD2	Q3B7J2	385 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	ACTBL2	Q562R1	376 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	BEX5	Q5H9J7	111 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	PHYHD1	Q5SRE7	291 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	THEM4	Q5T1C6	240 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	DHRS11	Q6UWP2	260 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	SYT13	Q7L8C5	426 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	TMED4	Q7Z7H5	227 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	KDM8	Q8N371	416 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	RXFP4	Q8TDU9	374 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	FAM46B	Q96A09	425 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	MALSU1	Q96EH3	234 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	C18orf12	Q96KH6	178 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	CDC6	Q99741	560 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	ZNF768	Q9H5H4	540 aa	Known RBP	3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	TUBA4B	Q9H853	241 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	SEC61A2	Q9H9S3	476 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	MED29	Q9NX70	200 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	MCTS1	Q9ULC4	181 aa	Known RBP	3.88	□□□□□ -1.79
CTSC-208	ENST00000533897	B3GALT5	Q9Y2C3	310 aa		3.88	□□□□□ -1.79
CTSC-208	ENST00000533897		A0A0U1RQV5	110 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	CRYM-AS1	A6NIL9	109 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897		B4DGG1	531 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	EIF1AY	O14602	144 aa	Known RBP	3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	DCN	P07585	359 aa	Known RBP	3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	LIPC	P11150	499 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	EN2	P19622	333 aa	Predicted RBP	3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	CRYGS	P22914	178 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	EIF1AX	P47813	144 aa	Known RBP	3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	NXPH1	P58417	271 aa		3.87	□□□□□ -1.79
CTSC-208	ENST00000533897	PLCXD2	Q0VAA5	305 aa		3.87	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms