RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 FAM3AP98173 230 aa11.11□□□□□ -0.63
PABPC1-205ENST00000518196 BDH1Q02338 343 aa11.11□□□□□ -0.63
PABPC1-205ENST00000518196 SPHARQ15513 63 aa11.11□□□□□ -0.63
PABPC1-205ENST00000518196 TBCEQ15813 527 aaPredicted RBP11.11□□□□□ -0.63
PABPC1-205ENST00000518196 ODF4Q2M2E3 257 aa11.11□□□□□ -0.63
PABPC1-205ENST00000518196 OR2T2Q6IF00 324 aa11.11□□□□□ -0.63
PABPC1-205ENST00000518196 ZNF773Q6PK81 442 aa11.11□□□□□ -0.63
PABPC1-205ENST00000518196 DOK3Q7L591 496 aa11.11□□□□□ -0.63
PABPC1-205ENST00000518196 ZNF676Q8N7Q3 588 aa11.11□□□□□ -0.63
PABPC1-205ENST00000518196 ZNF485Q8NCK3 441 aa11.11□□□□□ -0.63
PABPC1-205ENST00000518196 CCDC54Q8NEL0 328 aa11.11□□□□□ -0.63
PABPC1-205ENST00000518196 OR5AK2Q8NH90 309 aa11.11□□□□□ -0.63
PABPC1-205ENST00000518196 CCL19Q99731 98 aa11.11□□□□□ -0.63
PABPC1-205ENST00000518196 TRAF4Q9BUZ4 470 aaPredicted RBP11.11□□□□□ -0.63
PABPC1-205ENST00000518196 DYNLRB1Q9NP97 96 aa11.11□□□□□ -0.63
PABPC1-205ENST00000518196 GPR84Q9NQS5 396 aa11.11□□□□□ -0.63
PABPC1-205ENST00000518196 CYSLTR2Q9NS75 346 aa11.11□□□□□ -0.63
PABPC1-205ENST00000518196 A0A087WXM4 84 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 hCG_38984A0A1B0GV85 526 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 LOC390937A0A1W2PQ73 354 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 TRIM64A6NGJ6 449 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 TMEM212A6NML5 194 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 OR4C45A6NMZ5 311 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 CD300LBA8K4G0 201 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 IQCF6A8MYZ5 107 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 M0R233 179 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 OGG1O15527 345 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 SYT7O43581 403 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 FBXO24O75426 580 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 CD8AP01732 235 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 ZNF12P17014 697 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 VAMP1P23763 118 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 MAP2K4P45985 399 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 GSK3AP49840 483 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 CDH15P55291 814 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 NANOS3P60323 173 aaKnown RBP11.1□□□□□ -0.63
PABPC1-205ENST00000518196 KRTAP10-9P60411 292 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 ACSM1Q08AH1 577 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 CDK5R1Q15078 307 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 MST1LQ2TV78 715 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 ZMAT1Q5H9K5 638 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 SPARTQ8N0X7 666 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 OR5AS1Q8N127 324 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 CSNK2A3Q8NEV1 391 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 PIGTQ969N2 578 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 FAM71F1Q96KD3 344 aaPredicted RBP11.1□□□□□ -0.63
PABPC1-205ENST00000518196 LYZL4Q96KX0 146 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 OR5M11Q96RB7 305 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 MS4A5Q9H3V2 200 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 ZNF696Q9H7X3 374 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 ISYNA1Q9NPH2 558 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 ACOT13Q9NPJ3 140 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 MYEF2Q9P2K5 600 aaKnown RBP11.1□□□□□ -0.63
PABPC1-205ENST00000518196 ST6GALNAC2Q9UJ37 374 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 LSM2Q9Y333 95 aaKnown RBP11.1□□□□□ -0.63
PABPC1-205ENST00000518196 DCHS2Q6V1P9 2916 aa11.1□□□□□ -0.63
PABPC1-205ENST00000518196 ARFGEF3Q5TH69 2177 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 DHRS3O75911 302 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 LALBAP00709 142 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 IGLV3-1P01715 115 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 RAF1P04049 648 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 ISG15P05161 165 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 ERCC1P07992 297 aaPredicted RBP11.09□□□□□ -0.63
PABPC1-205ENST00000518196 HSMCR30P0CW71 290 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 ACHEP22303 614 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 CCL1P22362 96 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 DNASE1P24855 282 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 ALDH3B1P43353 468 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 PPOXP50336 477 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 EMX1Q04741 257 aaPredicted RBP11.09□□□□□ -0.63
PABPC1-205ENST00000518196 SLC3A1Q07837 685 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 RIPPLY1Q0D2K3 151 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 ALKBH6Q3KRA9 238 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 XAF1Q6GPH4 301 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 C11orf71Q6IPW1 123 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 PAMR1Q6UXH9 720 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 ZNF367Q7RTV3 350 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 FTMTQ8N4E7 242 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 SEMA6DQ8NFY4 1073 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 TSPAN14Q8NG11 270 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 OR8G5Q8NG78 346 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 OR56B2PQ8NGI1 322 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 FCGR1BQ92637 280 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 SMIM19Q96E16 107 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 CXorf56Q9H5V9 222 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 TMEM100Q9NV29 134 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 HHLA2Q9UM44 414 aa11.09□□□□□ -0.63
PABPC1-205ENST00000518196 NOP16Q9Y3C1 178 aaKnown RBP11.09□□□□□ -0.63
PABPC1-205ENST00000518196 A0A1B0GTI1 187 aa11.08□□□□□ -0.64
PABPC1-205ENST00000518196 LOC107986453A0A1B0GWG9 222 aa11.08□□□□□ -0.64
PABPC1-205ENST00000518196 ANKRD30BLA7E2S9 258 aa11.08□□□□□ -0.64
PABPC1-205ENST00000518196 PLPP2O43688 288 aa11.08□□□□□ -0.64
PABPC1-205ENST00000518196 ZFPL1O95159 310 aa11.08□□□□□ -0.64
PABPC1-205ENST00000518196 CD1AP06126 327 aa11.08□□□□□ -0.64
PABPC1-205ENST00000518196 CELP19835 753 aa11.08□□□□□ -0.64
PABPC1-205ENST00000518196 EPHA1P21709 976 aa11.08□□□□□ -0.64
PABPC1-205ENST00000518196 ZNF81P51508 661 aa11.08□□□□□ -0.64
PABPC1-205ENST00000518196 MMP15P51511 669 aa11.08□□□□□ -0.64
PABPC1-205ENST00000518196 MLLT11Q13015 90 aaPredicted RBP11.08□□□□□ -0.64
PABPC1-205ENST00000518196 GPR50Q13585 617 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms